Eublepharis macularius (Leopard gecko): 129338730
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Entry
129338730 CDS
T09084
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
emc01001
]
129338730 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129338730 (TRIM28)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129338730 (TRIM28)
Protein kinases [BR:
emc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
129338730 (TRIM28)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129338730 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
zf-RING_2
zf-C3HC4
YaaC
Motif
Other DBs
NCBI-GeneID:
129338730
NCBI-ProteinID:
XP_054849148
UniProt:
A0AA97K1H9
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All DBs
Position
12:48650553..48677626
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AA seq
865 aa
AA seq
DB search
MSASATAPATAPTETAAGGDKQRSPASASATATSGSAATDGIDLLEKCGVCRERLRSERD
PRLLPCLHTVCKECLKTEPAVGGGNNKDGQVVDCPVCKHQCFLKDIVENYFLRDGGTEPL
GDARDANQCCTSCEDNAPASSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGSSKSQER
EKTVYCSVHKHEPLVLFCDTCDTLTCRDCQLNAHKDHQYQFLEDAVKNQRKMLASLVKRL
GDKHANLQKSTKEVRTSIRQVADVQKRVQVDVKMAILQIMKELNKRGKVLVNDAQKVTEG
QQEKLERQHWTMTKLQRHQEHILRFANWALESDNNTALLLSKKLIYFQLHRALKMIVDPV
EPHGDMKFQWDLNAWTKSAETFGQIISERSGLPVVLNAQTPQQRANATSGAASGVAAVRQ
PGVPPSQGVQQMSLQTSMVNKGALLQPVLPSNSQRQAIPDCYINDAGASSAGQPMDISDG
FGVEGSYSGEANVSGTKRPRGQDGESGVMRKVPRVSLERLDVDLTSDSQPPVFKVFPGTS
TEDYNLIVIERGAQQAAAAAAAAAAQQAGLPTAATAVKEEQMEAAIDHPVAVEGKDTKPI
ILPQDALLAEGSAAPRLISPSGSTSSAMEMQSVQSHDGTANGEEAACCRVCLKAGAVVMC
DGCKKCYHLDCHLPALQEIPSQEWKCLLCEDPVAASEESGATLATISVDGELNILRDADQ
QRCERVLLELLCYEPCRPLHRLSNATEGQNTIDLTLIRAKLQGKLSPPYTSPDQFAEDVW
KMFRQFNKLTEDKEDVQSIIGLQRFFESKLNAVFGDRKFSALADPINVDEPQRGESSASA
HGSSATDLGEITSSKPEGSGGDEGM
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcggcaacggctccggcgaccgctccaaccgagacggcggctggtggggac
aagcaacgttccccagccagtgctagcgccaccgccacgagtggatccgccgcgacggac
ggcatcgacctcctggagaagtgcggcgtgtgccgggagcgcctccgctccgaacgagac
ccgcgccttttgccttgtctccacaccgtctgcaaggagtgtctcaagaccgagcccgcc
gtcggagggggcaacaacaaggatggccaagtagttgactgtcctgtgtgcaagcaccaa
tgttttctcaaggacattgtggagaattacttcctgagggatggcggtacagagcctctg
ggggatgctagagatgccaaccagtgttgcaccagttgtgaagacaatgctcccgcttcc
agctactgtgtggagtgttcagagcccctgtgcgagacatgcgtggaagctcaccagaga
gtgaagtacaccaaggaccacactgtccggtccacaggctcttccaagtctcaggagaga
gagaagactgtctactgctccgtccacaaacatgagccattggtgctgttctgtgacact
tgtgacaccctgacctgccgggactgccagctgaatgcacacaaggatcatcagtaccag
ttcttagaggatgcagtcaagaaccagcgcaagatgctggcctcactggtcaagcgcctg
ggtgataagcatgccaatctccagaaatcaaccaaggaagtgcgtacctcgatccgtcaa
gtggcggatgtgcagaagcgtgtacaggtagatgtgaagatggctatcctgcagatcatg
aaggagctcaataagcggggcaaagtcctggtcaatgatgcacagaaagtcactgaagga
cagcaggagaagctagagagacagcactggaccatgactaagctccaacgccaccaggag
cacatcctacgctttgcgaactgggccttggagagtgacaacaacactgctctgctgctc
tccaaaaaattgatttacttccagctgcacagggctctgaaaatgatcgtggatcctgtg
gaaccccatggagacatgaaattccagtgggacttaaatgcttggaccaagagcgcagag
acatttggtcagataatctcggaacggagcggcttgccagtggtactcaatgcccagact
ccccagcagcgagccaatgccacctctggagctgcatctggagtagcagcagtcaggcag
cctggtgtcccaccttctcagggtgtccaacaaatgtctctgcagacaagcatggtgaac
aagggagccctgcttcagcccgtgctgccttctaacagccaacggcaggctatccctgac
tgctacatcaacgatgctggtgcctcttctgcagggcagccaatggacataagtgacggc
tttggtgtagaaggatcatattctggtgaggcaaatgtatctggaacaaaaaggccccgt
ggccaagatggagagtcaggtgtcatgcgcaaagtgccccgtgtaagtttggagcgactg
gatgtggacttgacatcggacagccagccacctgtcttcaaagtctttccaggcacttcc
actgaagattataatctcattgtcattgaacgtggggcccagcaagcagctgctgccgct
gccgcagccgccgcccaacaagcaggcctgccaacagctgccactgcagtgaaggaggag
cagatggaggcagccattgaccaccctgtagctgttgagggtaaagacaccaagcccatc
atcctaccccaggatgctctgttagcagaaggctctgcagccccccggctcatctccccc
agcggcagcaccagctctgctatggaaatgcagtctgttcagagccacgatggcacagcc
aatggggaagaagcagcttgctgcagggtctgcctgaaagctggtgctgttgtcatgtgc
gatggatgcaagaagtgctaccacctggactgccaccttcctgcgcttcaggaaattccc
agtcaggaatggaagtgcttgctgtgtgaggatcctgtggcagccagtgaagaaagcgga
gctaccttggctacaatctccgtagacggcgagctgaatattctcagagatgctgaccag
cagagatgtgaacgagtcctccttgagttgctgtgttacgagccgtgcaggcctcttcac
cgactctccaatgccacggaggggcagaacacgattgacttgaccttgatcagagccaag
ctgcaggggaagctctcgcctccctacacctctcctgaccagttcgcagaagatgtctgg
aagatgtttaggcagttcaacaagctgacagaggacaaggaggacgtccagtccatcatt
gggctgcagcgcttttttgagtcgaagctcaatgctgtctttggggatcgcaagttttca
gctctggcagaccccatcaatgtggacgagccacagagaggagaaagcagtgcttctgcc
catggctcctcagccactgatctgggtgaaatcacttcttccaagcctgaaggaagtggt
ggggatgagggaatgtaa
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