Eublepharis macularius (Leopard gecko): 129338767
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Entry
129338767 CDS
T09084
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129338767 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129338767 (SMARCD2)
03036 Chromosome and associated proteins [BR:
emc03036
]
129338767 (SMARCD2)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129338767 (SMARCD2)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129338767 (SMARCD2)
PBAF complex
129338767 (SMARCD2)
GBAF(ncBAF) complex
129338767 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129338767
NCBI-ProteinID:
XP_054849211
UniProt:
A0AA97LBX3
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All DBs
Position
12:39979917..40007800
Genome browser
AA seq
509 aa
AA seq
DB search
MAGRGGGFSLTPPPAGVPPPASIPVVAAASLPLGPGGGLLRGLSPAGATPYRPVGPVAQF
QRPGMLPGGRMPMAGMQMGSASGPPYGAASPMRPGMPQSMMDPFRKRLLAPQAQPPSALT
QRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQ
KRKLRIYISNTFTPGKEESEGGERIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRIASTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFGCIRMRFSEIPMKLAGLLQ
HPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHE
TIESINQLKTQRDFMLSFSNSPQDFIQEWIRSQQRDLKIITDVVGNPEEERRVEFYQQPW
MQEAVGRHIFAKVQQRRQELEQVLGVRLT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcgcggcggaggcttctccctcaccccgccccccgcaggggtcccgccgccc
gcctcgatccccgtggtggcggccgcttcactccctctcgggccgggcgggggactcctg
cgagggctcagcccggctggggccaccccgtaccgccccgtggggcccgtcgcgcagttc
cagcgccctgggatgctacctggtggccggatgcccatggcagggatgcagatggggtct
gcctcaggacctccctatggagcagcttctccaatgagacctggaatgccacagtccatg
atggatcccttccggaagcgcctgcttgctccacaggcccagccaccttcagcactaacc
caaaggcgagggctgaaaaggaggaagatggcagacaaagtcctaccacagaggattcgt
gagctggtcccagagtctcaggcctatatggatttgcttgcctttgaacgcaagctggac
cagaccatcgcccgcaaaaggatggagatccaggaggccatcaagaaacctttgacgcaa
aagcggaagctgcgcatttacatctccaatacctttactcctggcaaggaggaatctgaa
ggcggcgagcggatagcctcatgggaacttcgtgtggagggcaaacttttagatgatcca
agtaagcagaagagaaagttctcctcctttttcaagagtctggtcatcgagctggataaa
gagctgtatggtccagacaatcatctggtagagtggcatcgaattgcctcaacccaagag
acagatggcttccaggtcaagcgcccgggtgatgtcaatgtgaaatgtaccctgcttctc
atgctggaccaccagcccccccaatataagctggacccccgcctggctcgcctgctgggt
gttcacacccagactcgtgccagcatcatgcaggccctctggctgtacatcaaacacaac
aagcttcaggacagtcatgagaaggagtacatcaactgcaaccgctacttccgccagata
tttggctgcatccgcatgcggttctctgagatccccatgaaactggcagggctcctgcaa
cacccggatcccattgtcatcaaccatgtcatcagtgtggatcctaatgatcagaagaag
actgcctgctatgacattgatgtggaggtggatgaccccttgaaggcccaaatgagcaac
ttcttggcctctaccaccaaccagcaggaaattgcctccttggacgttaagatccatgaa
accattgagtccatcaaccagctgaagacacaaagagatttcatgctgagtttcagcaac
agcccgcaggatttcatccaggaatggatcagatctcaacagagggacttgaagattatc
acagatgtggttgggaaccctgaagaggagagacgtgtcgagttctatcagcaaccctgg
atgcaggaggctgttgggagacacatctttgccaaggttcagcagcgcagacaagaactg
gaacaagtgcttggtgtccgcctcacttag
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