Eublepharis macularius (Leopard gecko): 129338782
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Entry
129338782 CDS
T09084
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03030
DNA replication
emc03410
Base excision repair
emc03420
Nucleotide excision repair
emc03430
Mismatch repair
emc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129338782 (POLD1)
03410 Base excision repair
129338782 (POLD1)
03420 Nucleotide excision repair
129338782 (POLD1)
03430 Mismatch repair
129338782 (POLD1)
03440 Homologous recombination
129338782 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emc03032
]
129338782 (POLD1)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129338782 (POLD1)
Enzymes [BR:
emc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129338782 (POLD1)
DNA replication proteins [BR:
emc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129338782 (POLD1)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129338782 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
129338782 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
DNA_pol_B_2
DUF6356
divDNApol
Motif
Other DBs
NCBI-GeneID:
129338782
NCBI-ProteinID:
XP_054849243
UniProt:
A0AA97LB74
LinkDB
All DBs
Position
12:47772665..47799543
Genome browser
AA seq
1112 aa
AA seq
DB search
MENKRKASLGSVGEPTLSQRKKPRGGDWEEDGPSQFEEELAFLDEVEAEMALEAKEAQGT
SDDIPLGNLFSSVWNPKWQRPSLPKLNPKEHALCFQQVELDYYVGSHMPGFPGSTDGPVP
VLRMFGVTMTGNSICCHIHGFAPYFYVPAPTGFQAVHLSDFQRELNTAVIRDMRSNKDGL
SQAVLAVEICNKQSMYGYHGQHLLPFLKITMALPRLIAPAKRLLEQGLRCGSLGTHNYQA
YEANIDFEIRFMVDRDVVGCNWIELPSGKYRLRQEQPSGESNKENPPKVSLCQLEADVAW
MDFISHPPEGEWQRIAPLRVLSFDIECAGRKGIFPEPEKDPVIQIANMVLRQGEKDAFVR
NVFTLQNCAPIVGSQVLCFTKEEELLKAWAEFIRIADPDIITGYNIQNFDLPYLITRAQT
LKVSTFPFLGRIPTRKSVIRDSSFQSKQMGRRENKVINMEGRIQFDLLQVLLRDYKLRSY
TLNAVSYHFLQEQKEDVQHSIITDLQNGSDQSRRRLAVYCLKDAYLPLRLLEKLMCVINY
MEMARVTGVPLSYLLARGQQIKVVSQLLRQAMKQDLLMPVVKTEGGEDYAGATVIEPLKG
YYDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGAVERYGLLPEQFIRTPTSDLFVKASVR
KGLLPEILENLLAARKRAKGELQRETDPFKRQVLDGRQLALKVSANSVYGFTGAQVGKLP
CLEISQSVTGFGRQMIEKTKQLVESKYTIANGYSADAKVVYGDTDSVMCRMGVPSVAEAM
EVGREAAAWVSSHFTPPIKLEFEKVYFPYLLINKKRYAGLYFSSNPDTHDKMDCKGIETV
RRDNCPLVANLINTCLQKLLIDRDPAGAVAHAKEVISDLLCNRVDISQLVITKELTRTAD
EYAGRQAHVELAERMRRRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENNLPI
DTQYYLEQQLAKPLLRIFDPILGESKAQNILLKGDHTRCKTVLTAKVGGLMAFATKRSTC
IGCRAVLNHHGAVCKFCLSRQSELYQKEVTHLSALEEKFSRLWTQCQRCQGSLHEDVLCT
SRDCPIFYMRKKVQKDLDDQEGLISRFGPPTW
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagcgaaaagcttccctaggaagtgtgggtgagcccactctgtcacagcgg
aagaagccacgtggaggagattgggaagaggatggcccctctcagtttgaagaggagctg
gcttttctagatgaggtggaagccgagatggctctggaggcgaaggaagcacagggaaca
tctgatgacatccctctaggaaatctcttctcatcagtgtggaatcctaagtggcagagg
ccatcacttcccaaattaaaccccaaggagcatgctttgtgtttccagcaagtggaactg
gattattatgtgggttctcacatgcctggattcccaggatccaccgatggtccagttcct
gtgctacgaatgtttggtgtcaccatgaccggcaacagcatctgctgtcacatccatggt
tttgccccttatttctatgtgcctgccccaactggtttccaagcagtgcacctgtctgat
ttccaacgggagctgaatacagctgtcattcgggacatgcggtctaacaaggatggtttg
agtcaggctgttctggcagtggaaatctgcaataagcaaagcatgtatggctaccatggg
caacatctcttacccttcctgaaaattactatggcactgccccggctgattgcaccagcc
aagagactgctggaacaagggctgcggtgtgggtcgttgggaacacacaactatcaagcc
tacgaggccaatattgacttcgagatcaggttcatggtggaccgagacgtcgttggctgt
aactggattgaattgccttctggcaaataccgcttacggcaggaacaaccttctggagaa
tccaacaaggagaacccacccaaggtatcgctttgtcagctggaggctgatgtggcctgg
atggatttcatcagccaccccccagaaggagagtggcaacgtattgcccctttgcgtgtg
cttagttttgatattgagtgtgctggacgcaaaggtatttttcctgaaccagaaaaggat
ccggtgatccagatcgccaacatggtcttgcgccagggggagaaggatgcctttgtgcgc
aacgtcttcactttgcagaactgcgcccctattgttggttctcaggtgctctgtttcacc
aaagaggaggagctgctgaaggcctgggcagaattcatacgaattgcggaccctgatatc
atcactggttacaacatccagaactttgaccttccatatctcattactcgggcccaaact
ctcaaggtctctacatttcccttcctgggtcgcatccctacccgcaagtccgtcatccgt
gactcttccttccagtccaagcagatgggccggagggagaacaaagtcattaacatggaa
ggccggatccagtttgatctgcttcaggttctgctacgggattacaaacttcgttcttac
acattaaatgctgtcagttatcacttcctgcaggagcagaaggaagacgtgcagcattcc
atcatcacagacctgcagaacggttcagaccagtcacggcggcgactagccgtgtactgc
ctcaaggatgcctacctgcccctgcgactcttagagaagctcatgtgcgtcatcaactac
atggagatggcaagagtcactggtgtccctctcagctacctcctggcacgagggcagcaa
atcaaggttgtctctcagcttctgaggcaggccatgaagcaggatctattgatgccagtg
gtgaagacggaaggtggggaagactatgctggcgcaaccgtcatcgagccactgaagggc
tattatgatgtgcccatagctaccttggacttctcttccctgtacccttccatcatgatg
gcgcacaacctgtgctacaccacactgctgcaatcgggggcggtagagcgctatgggctt
ttgccggagcagttcatccgtaccccaaccagtgacctgtttgtgaaggcgtctgttcgc
aaagggctgttgcctgaaatcttggaaaacttactggcggcccgcaagagggccaaggga
gagctgcagcgggagactgatccgttcaagcgccaggtgttggatgggcggcagctggcc
cttaaggtcagcgccaactctgtttatggcttcactggggcccaagtgggcaagctgcca
tgccttgagatctctcagagtgtgactggatttgggcgtcagatgattgagaagacgaag
cagctggtggaatccaagtacactattgccaatggctacagcgccgacgcaaaggtagta
tatggggacacagactcagtgatgtgccgtatgggtgtgccatcggttgcagaggctatg
gaagtaggcagagaagcagctgcttgggtctccagtcatttcacaccacccatcaagctt
gagtttgagaaggtgtactttccctacctcctcatcaataaaaagcgctatgccggcctg
tacttttcatctaaccctgacacacatgacaagatggactgcaaaggcattgaaactgtg
cgccgtgacaactgccccctagtggcgaacctcatcaacacctgtctgcagaagctgctc
atagatagggaccctgcgggtgctgtggctcatgccaaggaggtgatctctgatctgctg
tgtaacagagtcgacatctcgcagctggtaattaccaaggaactgacccgcacagcagat
gaatacgcagggcgccaggcccatgtggagctggcagagcggatgcgtcgacgggatccc
ggcagtgcccccaacttgggggacagagttccgtatgtcattattggtgctgccaaagga
gttgcggcttacatgaaatctgaagatccgatctacgtgctggagaacaacctgcccatt
gacacccagtactacttggagcagcagctggccaaaccgctcctgcgaatctttgacccc
atcttgggagagagcaaggcacaaaatattctgctgaagggggaccacactcgctgcaaa
actgtcctgacggccaaagtcggggggctcatggcttttgccaccaagcgaagcacctgt
atcggctgtcgggctgtgctcaaccaccatggtgctgtctgcaaattctgcttaagccgt
cagtctgaactctaccagaaagaggtgacccatctgagtgccctagaagagaagttctcg
cgcttatggacacagtgtcaacgctgccagggcagcctccatgaggacgtgctgtgtact
agccgcgactgccccatcttctacatgcggaagaaagtgcagaaggaccttgatgatcaa
gaagggctaatctcacgttttggtcccccgacatggtga
DBGET
integrated database retrieval system
