Eublepharis macularius (Leopard gecko): 129338997
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Entry
129338997 CDS
T09084
Symbol
TMC4
Name
(RefSeq) transmembrane channel-like protein 4 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129338997 (TMC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
emc02000
]
129338997 (TMC4)
03037 Cilium and associated proteins [BR:
emc03037
]
129338997 (TMC4)
Transporters [BR:
emc02000
]
Other transporters
Pores ion channels [TC:
1
]
129338997 (TMC4)
Cilium and associated proteins [BR:
emc03037
]
Other cilia and associated proteins
Stereociliary proteins
129338997 (TMC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129338997
NCBI-ProteinID:
XP_054849560
UniProt:
A0AA97LB03
LinkDB
All DBs
Position
12:62098637..62116945
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AA seq
709 aa
AA seq
DB search
MEDGRESGLGTGTDEAGSSLGRHSPSLFLQLPSNQTLRFRGNKAEAWGAALEGGIESSVV
PQDCVVGEEEEEDQRPLKELPLCLEEKRRLRFLQEQAASRLSGWRLWRVEKQRTLRHLRS
QAGTVMSYVVMWKSTLRHIEGHFGTGIQSYFNFLRFLVLMNFVASLLVVGFVIAPNAAFE
ALHLNWTGRPNNVSANASCVHYDPSAHGLVSYFSYIMDLLSGKGFMELTYLFYGYYQNSA
VDFASFSYNVPLAYLLTAFFYLLFCLIWIVQRSVYCLKHSLVSEDASLGSYSNKVFAGWD
FGLMQHSAVQLKHKSIRYELRMDLEEEALRRRLAERTTRQRATLYILRGLLNLLVLSLLG
GGFFCIYLATSYSQWLLGSADSPVKGQYILELLVAYLPSIVITVANLLIPIIFGVIVQLE
KYPLSFEIKITLLRNVFLRLASLVVLLISLWSQITCSGDPKDSNCKDCGYSHLFPCWETS
VGQEMYKLLIFDLLIMLLVMLFVEFPRKILVTYLPSCPLLKLWGQQEFMVPSNVLDLVYG
QTVCWTGALFCPLLPVLNTLKYIMIFYLKKLTLYANCRPAERTFRASSSNFFFLLVLLMG
LTISCVPALYSMFVLPPSKSCGPFRGEPTMWNTVSNAISELPLTAQEFLEFVGSLAFAVP
LFLLLSILMFYLMALAGSYSSMVKGLKGQLRLEGQDKLFLVKQISELSQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggccgggaaagtggtttggggaccggaaccgacgaagcagggtccagcctg
ggtcgccatagcccatctctctttctccagctaccaagcaaccagacactgcgtttccgt
ggcaacaaggcagaggcctggggagcagctttagaggggggaatagagtcctcggtggtt
ccccaggactgtgtggtgggagaggaggaggaggaagaccaaagacctctgaaagagctg
cccctctgtcttgaggaaaaacggaggctcaggtttctgcaggagcaggcagccagcagg
ctcagcggttggcggctctggcgtgtggaaaaacaacggacattacggcatcttaggagc
caagcaggcacagtgatgtcatatgtagtgatgtggaagagcacgctgcgccacattgaa
ggccactttggaacagggatccagtcatacttcaactttctgcgattcttggtcctgatg
aactttgttgcctctttgctggtggtgggatttgtgatcgctcccaatgcagcattcgag
gccctccacctcaattggacaggtcgaccaaacaacgtctcggcaaatgcctcttgtgtg
cattatgacccctctgcccacggcttggtcagctacttttcctacatcatggatcttctg
tctggcaagggttttatggaactcacctacctattctatggctactatcaaaattcagct
gtcgattttgccagtttctcgtacaatgtccctcttgcatatctgctcacagcattcttc
tacctcctcttctgtctgatatggattgtacagaggtcagtctattgtctcaaacacagc
ttggttagtgaagatgcttcccttggatcctacagcaacaaagtctttgctggctgggat
ttcggtctgatgcagcacagtgcggtgcagttaaaacacaagagtattcgctacgagctg
cggatggatctggaggaggaggcactccggaggcgcctggcagagaggaccacaaggcaa
cgagccactctctacatcctccgaggcttgctcaaccttctggttttaagcctcttgggt
ggaggctttttctgcatctacctggcgacgagctattcccagtggcttctgggatcggca
gactccccggtcaaaggtcaatacatcttggagctgctggtggcttatctcccatctatt
gttatcacagttgctaacctccttatcccaattatttttggggtcatcgtgcaactagag
aaatatccactcagctttgaaatcaaaatcactcttctcaggaatgtcttcctccgtctt
gccagcttggtggttcttcttatctcactttggtctcagattacttgtagtggggaccca
aaagattccaattgcaaggactgtggatacagccatctattcccgtgctgggagacttca
gtggggcaggaaatgtacaagctgttgatcttcgacctgctgatcatgttgctcgtgatg
ttatttgtggagtttccaaggaagatattggtgacatatttgccctcctgcccattactt
aaattatggggccagcaagagttcatggtgccctccaatgtcctggatctggtgtatgga
cagaccgtgtgctggacaggcgctctcttctgtcccctgctgcctgtactcaacactctc
aaatacattatgatcttctacctgaaaaagctaaccctctatgccaactgccggccagct
gaacggacatttcgagcatccagctccaatttctttttcctgttggttttgctgatgggt
ctgactatttcttgtgttcctgccctatacagcatgtttgttttgcccccttcaaaatct
tgtggcccatttcgaggtgagcccaccatgtggaacacagtttccaatgccatttctgag
ttgcccctcacggcccaagaattcctggagtttgtaggctctttggcttttgcagtgccc
ttgttcctgttgctgagcatcctcatgttctacctcatggctctcgctggttcctacagc
tccatggtcaaaggtctgaaagggcagctccgactggagggtcaggacaagcttttctta
gtaaagcagatctccgagttgagccaatga
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