Eublepharis macularius (Leopard gecko): 129339078
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Entry
129339078 CDS
T09084
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
emc01001
]
129339078 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
emc04054
]
129339078 (CIITA)
Enzymes [BR:
emc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129339078 (CIITA)
Protein kinases [BR:
emc01001
]
Serine/threonine kinases: Other
TAF1 family
129339078 (CIITA)
Pattern recognition receptors [BR:
emc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129339078 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NLRC4_HD2
LRR_8
LRR_9
NB-ARC
nSTAND_NTPase5
CARD
nSTAND3
AAA_22
AAA_16
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-GeneID:
129339078
NCBI-ProteinID:
XP_054849659
UniProt:
A0AA97K672
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All DBs
Position
12:28716990..28775257
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AA seq
1142 aa
AA seq
DB search
MNLFQEILPGIRNILSNASAFQIQALLNLMSEEGVISKEYHQTLLHEKDREDLARKICLT
LVGKQDVCLESFASHSCLQFCGNNQEGASEAKSARTRSLGHTTMGSGILPAKGYLDLLHS
DVDPLLLYRNIEDDLPAGHTPDTSIYDPDNNPDLFYTVESGESGEEVCLCSSTGEAYEKI
AELAEYLLKDQLEEPVEDLFGRFVDAATEGCSEPKTQAYPPGQCSRSTSTATFPLDMSTA
EAICLPNFHVQFSVTTITPAGRLPKIFNPSDSALHTKGIQMILAFLPPSPQVNLPFGPTV
SDINSCLAEDAIDDGSQIPPLHSDKVHKRPELVDNFSIGLKTSFGDKCKFVSTERDIPME
HLYIEGNVVQHHAENRSGRNADLRVCDLEEKEKTTVKRLFEIVEKNEVGANKVIVILGKA
GMGKSLLVQKICLDWSKGRFARFEFVFRFDCWRLSLLQGKHYSLRQLLFEFSVDPQEGED
QVYRYLLRNPEKVLLIFDGFEELQDLEGFSPCSDSPTRKEAWGIGAVLAGLFQKKKLNGC
VMLLTSRPKDKLHQYLPKVDKILEVVGFSSQQAEAYLARYFEGASYCTDAVELIKSSPYL
FSHCYNPDLCRIICFVCKSAFESGDRELPSNLTGLLVKFLLQKLECTMDEETSPKLQSIL
ILAQVAWSLGQGQPNTPMSHQFPPLEARKLALQCGIMVPLASSEGREECSYAFSSFVVHN
FLAALHLVFNKEIKDKKLTKHLWVLSKPKRFLCSWDLVPRFLAGLLFIQDDLRSSFLFRE
EGEVDTEQMIAKKQKSLSKYIRKLEISNLSPDKLLEIFHCVQETEDPFLLQHLALRVRPA
LSFLGFPFTPPDVHILHSVLRKATKEFALDLRRSSVGSEGLRHLVCLKNVTSYRASLGEA
VQLWECLWGTTAGEQLQSAIKKFIINPFKAQTVMDVDDLSALVRVQEKMSPSKAGSSDCN
VHVIPAVTNLRHLEFALGPTCGLKGFKKLVDILDAFPALQHLDLDSQKENRIGDEGVAAL
SDVLPHLRSLETLNLSQNKITNLGAEKLAKALPSLPSLRTLSLYNNSIGDTGAENFARIL
PGLTSLRVLNVQCNKITAAGAQCLTDSLRKCPHVQSVALWNPTIPHGVLEHLQHLDSRIR
SL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttccaggagatcttgccgggcattcgaaacatccttagcaatgcttcggcc
ttccaaattcaggcactgctgaacctcatgtcagaagaaggtgtcatctccaaggaatac
caccagaccttgctccatgaaaaagacagagaagatctagcaaggaagatttgtttgacc
ctggtcggaaagcaggatgtgtgcctggaatcttttgcttctcactcttgtttgcagttc
tgtggcaacaaccaagaaggtgcctctgaagctaaatcagccaggactagaagcttgggt
cacaccacgatggggtcagggattctgcctgcaaaggggtacctggacttgctgcacagt
gacgtggacccgctacttctgtatagaaacatcgaagatgaccttcccgcaggccacact
cccgacaccagcatctatgacccggacaacaacccagatctcttttacacggtggaaagc
ggtgagagcggggaagaggtctgcttgtgttccagtactggagaagcctatgagaaaatc
gctgaacttgcagaatatttgctgaaagaccaactggaagaaccagtggaagaccttttt
ggaagatttgttgatgctgcaaccgaaggttgttcagagccaaagacgcaagcatacccc
ccgggtcagtgctccaggagtaccagcacagcgacgttccccctggacatgtctacagct
gaggccatctgtcttcccaacttccacgtgcagttttccgtgaccaccataacgcctgct
gggagacttccaaagatattcaacccttctgattcggcccttcatacaaaaggcattcag
atgatcttggcctttttgccgccttctccacaggtgaatttgccttttggaccaacagta
tctgacattaacagctgccttgctgaagatgcaattgatgatggatctcaaatcccacct
cttcattctgacaaagttcacaaaagaccagagctcgtggataacttttccatagggttg
aaaacctccttcggggacaagtgcaagttcgtgtccacagagcgagatatccccatggaa
cacctctacattgaaggcaatgtagtgcaacatcatgctgaaaaccggagtgggagaaat
gctgacctgagggtctgtgacctcgaagagaaggagaagacaacagtgaagaggctgttc
gagatagtcgagaagaacgaagtcggagccaataaagtcattgtcatcttggggaaggca
gggatggggaaaagtcttcttgtccaaaagatctgtcttgactggtccaagggcaggttt
gccagatttgagtttgttttccggtttgattgctggaggctgagcttgctccaggggaaa
cactacagtctgagacagctgctctttgagttctctgttgaccctcaagaaggagaggac
caagtctaccgatatctactgcggaacccagagaaggtcctccttatctttgatggcttt
gaagaattgcaggatctggagggcttctccccttgttcagatagcccaacccgtaaggag
gcctggggcatcggagcagttttagctggcctcttccagaagaagaaactcaatggatgt
gtcatgttgctgacttcccggcccaaagataagttgcatcagtatttacccaaggtggac
aagatcctggaagtggtggggttctcctcacagcaagctgaagcctacttggccaggtac
tttgaaggagcctcatactgcacagatgcagtggaactcattaaaagctctccttatctt
ttcagccactgttacaatcctgatctgtgcaggatcatttgctttgtgtgcaaatctgca
tttgaatcaggagatagagaactaccttccaatctcactggcctgctggtaaaattcctc
cttcaaaagcttgagtgcacaatggatgaagaaacctccccaaagctccagagcatcctc
atcttagcccaggttgcgtggtctctcggacaaggtcagccaaatacaccaatgagccat
cagttcccccctctcgaagccaggaagctggctttgcaatgcgggataatggtgcccttg
gcatcaagcgagggcagggaagaatgcagttatgcattttccagttttgtggtccacaat
ttcttggcagccttacatttggttttcaacaaggagattaaggacaaaaaacttaccaag
cacctttgggtactgtccaaaccaaaaaggtttctctgctcatgggacttggtgcctcgc
ttcctggctggcttgctcttcatccaggatgacctaagatcttccttcctcttcagagag
gaaggggaggtggacactgagcaaatgattgccaagaagcagaaaagcctctccaaatac
atccggaaacttgagataagcaatctcagcccagacaagctactggagatcttccactgt
gtccaggaaacagaagacccatttcttttgcagcatttggcactgagggtcaggccggcc
ctctctttccttggcttccccttcacacctcctgatgtgcacattctgcattctgtctta
agaaaagccacaaaggaatttgccttggatctgagaaggagctctgttggttcggaagga
ctcaggcatttggtctgccttaagaatgtcacatcgtacagggcatcacttggggaagca
gtgcagctctgggaatgcctctggggaacgacagcaggagagcagctgcagtcagccatt
aagaaatttatcatcaatccatttaaagcacagacagtgatggacgtggatgacctctct
gctctcgtgcgtgtgcaggaaaaaatgagccccagcaaggccggctcttctgactgcaac
gtccatgtgattccggctgtcacaaatcttcgacacctagaatttgcattgggacctacc
tgtggcttgaaaggattcaaaaaattggtagacattctggatgcatttccagctctccag
catttggacttagattctcaaaaggaaaacagaataggagatgaaggagtggcagccctc
agcgacgtccttcctcacttacgctccctggaaacactgaacttgtcacagaacaagata
actaacctaggagcagagaagctagccaaagctcttccttctctgccttcattgaggacg
cttagcctgtacaataacagcattggtgacactggagcagaaaactttgcaagaatactc
ccgggattgacctctttgagagtgctgaatgttcagtgcaacaagataacagctgctggg
gcccagtgcctgactgacagcctgagaaaatgcccccatgtgcagagtgtggcattgtgg
aaccccactattcctcacggagttcttgagcatcttcagcatctggattctcgaatcaga
tcactttaa
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