Eublepharis macularius (Leopard gecko): 129339778
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Entry
129339778 CDS
T09084
Symbol
RPGRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
emc03037
]
129339778 (RPGRIP1)
Cilium and associated proteins [BR:
emc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129339778 (RPGRIP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
VWA_2
Motif
Other DBs
NCBI-GeneID:
129339778
NCBI-ProteinID:
XP_054850335
UniProt:
A0AA97K5X1
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Position
12:71417244..71447688
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AA seq
1248 aa
AA seq
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MSLLLLDKTAEDFPVRDTNQKPSVITAIQDVSTSANFLVKAHPLKASMKASSVSLARTRR
QISRVSRTELEDGFLRLHDENLLLKDFAQKQEDRIKRMGTKLSRLSHERAQANEKPGIWI
RGSGRNLDLEDTQERVRELERHNEGLKSRLLFYKQQLQLQGCGRHCPYGSIPPRVNTGLR
RVHTATGRVPERLRKGMRVQGPEVRPTRTAPPRYGDHVPQGSQAETEKRXVLTHSLVMSE
LELDPETLSSVQDRETDPESSWSQQRHQEAQARRTAIQDNVELIRLQKLLRVKNSELVTA
KAQMTGLQESYETHLHKNQETLRTASEALLAQVEELSSRLKEETQKVMALETQLEILSPL
QGTLEEFQERVRDLQKERDLLKEDYDKLLESCINTAQQNLDEVPQRDNISSLEEQLSWVM
TEKQQLREQLEEERAQNEELKQEVNKLRELAQETRDVKEVDSSHEKAAILENQSVEQEPR
SNPVQLPYMEFLSRETEQEEAFVQRSLKRRLHETEAAHAETILELEKTRDMLILQHRINR
DYQVELDGVVQRSEQEKQDYEEKEQRMARLLDLRGARIHQLEAQLKDVAYGTRTLPFLPD
ETDMATGADPDGSPRLQRGENLFELHISGAVLSAELLHLLGDPEPATFCTYAFYDFETHC
TPVVHGTRPRYDFTSQYVVQAEPLFLQYLQGATARLDLHLASAIDHTTLASCWLHFGEAL
GSGEQVHSTAVLHGPNGEDYGFLEYWMRLRFPMEQILRLHRQRAKALGYLSAGVPRAPIA
QEGVLGAGWNEFCVRIEGCASLRSRWLGSQPSPYAMYQFFTFPDHDTIIVPSSNNPHFGD
LRTFPLRVTPELHHYLLRESLWVYVFDDEDVEPGGYLGKAEIPLLPLAHGRSVAGDFVLT
DPAGKPSGSIHLSLEWKLLYAPPEDVLHQLSLDREAHRSLELQIEKEQAALQSKHQRKKP
RLCLPEPEESLRKHAKSEIRTGGTAHVSSALEHRRHSVPLEKLKEEEEMPAVAEKDWPVR
RPDSEAESRRLTEAVAPKDVASEEPDSTSDAPTTESDEVVVAESGLQEPRELRLLDRIRV
EVVSLSLHPDSQPVANESIQQLYVEYRFPGVPLAETETPFSLRKPLGGQEIYFHFSKVIQ
LDPDPASLQRQLLFSMLVAEEPQDHQLQFIVVSEPLPGARGECDDVGFAHLDLREILLTG
TDVLEQNLPVVSSRSPNTSIGVLKISVEAAAALRLVYWAGKRKSNQGV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgttgctggacaagacagcagaggatttcccagtccgggacaccaaccag
aagccttcagtgatcacagcaatacaagatgtatcaacttctgctaacttcctcgtcaaa
gcccatcctctgaaggcctcgatgaaagcgtcgtcggtatctctagcaaggacacggcgt
cagataagccgggtgagccggacagagctggaagatgggtttctgcggcttcatgatgaa
aacctgctgctcaaggattttgcccagaaacaagaggacagaatcaagagaatgggtacc
aaactgtcaagactcagccacgagagagcacaagccaatgagaaacctgggatctggatc
cggggctctggccggaacctggacctggaagacacacaggaacgagttcgggaactcgag
aggcacaacgaaggtctgaagagccgcctgctcttctacaagcagcaactgcagctgcag
ggctgcggccgtcactgcccctatggctccatccctcccagggtcaacacaggacttagg
cgagttcacacagccaccgggcgagtgcccgagagactacgcaaaggaatgcgggtgcaa
ggaccagaagtcaggccaacccgcacagcccctcccagatacggggatcatgtgccacag
ggatcccaagcagagacagagaaacggtgagtcttaacccacagcctggtgatgtctgag
ctagaattggacccagaaacgctgagttccgtgcaggacagagagactgatccagaaagc
agctggtctcagcagcgtcatcaagaggcccaagcacgccgaactgccatccaagacaat
gtggagctgatccggctgcaaaagctgctgagggtgaagaattcagaactggtgactgct
aaagcccagatgactggcctgcaggaaagttatgagactcaccttcacaagaaccaagag
acgctgaggacagccagtgaggccttgctggctcaagttgaggagctgagcagccgactc
aaggaagagacccagaaagtgatggccctggagacacaattggagatcctttcgccattg
caggggacactagaagagtttcaggagagagtccgggacctgcagaaggagagagacttg
ctgaaggaagattatgacaaactgctggagagctgcatcaataccgcccagcaaaacctg
gacgaggtgccccagcgggacaatatttcttctttggaagagcagcttagctgggtgatg
acagagaagcagcagcttcgggaacagttggaagaggaaagagctcagaatgaggaactg
aagcaggaagtgaacaagctgcgagagctggcacaggaaaccagggatgtcaaagaagtc
gactcctcacacgagaaggcggccatcttggaaaaccaaagtgtggagcaagagcctcgg
tccaatcctgtccagctcccttacatggagtttctgtcaagagagacagagcaggaggag
gcatttgtccaacgtagcctgaagcgcaggctccacgaaacagaggctgcccacgcagag
accatcctggagttagagaaaacccgtgacatgcttatcttgcaacaccgcatcaaccgg
gactaccaggtggagctagacggggtggtgcagcggtctgagcaggagaagcaggattac
gaggagaaagagcagcgcatggctcgactcctggacctgcgtggcgctcgcatccaccag
ctagaagcacagttgaaggatgtggcctatgggaccaggacactcccgtttctaccagat
gagactgacatggccacgggtgctgaccctgatgggagcccacgtctacaacgtggcgag
aacctctttgagctccacatctccggcgcagtgctgtcagctgagttgctacatttgctg
ggagacccagagcctgccaccttttgcacgtacgccttttacgacttcgagacccactgc
acccccgtggtgcacggcacacggccccgatacgacttcacctcccagtacgtggtgcag
gctgagcctttattcctgcagtacttgcaaggggccaccgcccgcctcgacctccacctc
gcttccgccattgaccacaccaccctggcctcctgctggttgcattttggagaagcgctg
gggagtggggagcaggtgcactccacagcggtgctacatggtcctaacggtgaggactac
ggctttctggagtactggatgcggcttcgctttcccatggagcagatcctgaggctgcac
cgccagcgtgccaaggccttgggctacctatctgcgggagtgccacgggctccaatcgct
caagagggggtcctgggtgcaggatggaatgagttctgcgtacggattgaaggctgcgcc
agcctgcgcagtcgctggctcggctctcagcccagcccctatgccatgtaccagttcttc
accttcccagatcatgacaccatcattgtcccttcgagcaacaatccccactttggagac
ctgcgcaccttccctttgcgggtcacgccggagctgcaccattacctgctccgggagagc
ttgtgggtatatgtgtttgacgacgaagacgtggaacctgggggttacttgggcaaagcc
gagatcccactactgccactagcacatggacgcagtgttgcaggagactttgtgctcaca
gacccggctggaaagcctagtggttccatccatctgagcctggagtggaagcttctttat
gcacccccggaggatgtcctccatcagttgtccttggatcgggaggcccatcggtctttg
gaattgcaaattgagaaggagcaagctgcactgcaaagcaagcaccagaggaagaagcca
cgtctctgtctgcctgaacctgaggagagccttcggaagcatgccaagtcagaaatcaga
actggaggaacagctcatgtgagttcagcattagagcacagaaggcatagtgtgcctctg
gaaaagctcaaagaggaggaagaaatgccggctgttgcagagaaggattggccagtgaga
cgcccggattcagaagctgaatccaggagattgacagaagcagttgcaccaaaggatgtc
gcctctgaagaaccggacagcaccagtgatgctccgaccacagagagcgacgaagtggtg
gtggcagaatctgggctgcaggagcctcgggagctgcggcttttagacagaattcgcgtg
gaggtggtctctctgagcctacacccagacagccaaccagttgctaatgagtccatccag
caactctacgtggagtaccgattcccaggagtgccgctggcagaaacagagacccccttc
tcattacggaagcccctcggaggccaggagatctacttccacttcagcaaggtaattcaa
ctggatccagaccctgcaagcctccagaggcagctgctcttctccatgctggtggcagag
gaaccgcaggatcatcagttgcagtttatagtggtgagcgaacctcttcctggggctaga
ggagagtgcgatgatgtgggctttgctcacctggacctccgggagatccttctaacagga
actgatgtactggagcaaaatctgccagttgtcagttcccgtagccccaacaccagcatt
ggcgtgctgaaaatctcagtagaagcagcagctgctctgcgactcgtctactgggcaggc
aaaagaaaaagcaaccaaggggtctga
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