KEGG   Eublepharis macularius (Leopard gecko): 129340305
Entry
129340305         CDS       T09084                                 
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129340305 (POLR1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emc03021]
    129340305 (POLR1A)
Enzymes [BR:emc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     129340305 (POLR1A)
Transcription machinery [BR:emc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     129340305 (POLR1A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1 HMG_box zf-RING_4 DUF1639
Other DBs
NCBI-GeneID: 129340305
NCBI-ProteinID: XP_054850998
UniProt: A0AA97LCQ5
LinkDB
Position
12:complement(30396455..30454892)
AA seq 1706 aa
MAAAREAPWRRLTGLTFGVYRAAEIEKLSVKSITNPRFLDNAGTALPNGLYDLALGPLDN
KEVCATCVQDFNNCPGHLGYTDLPLTVYNPLFFDKLFLLIRGSCLSCCHLTCPRAVIHLL
LNQLKLLDVGLLEAVYDLEAVLSRFLEENAGALEIDIEEMLSQHTKEILQNNQLKDQGSN
VKNVCECKSKLISQFWKSHTSSKRCPNCKAERSLVRKEHNSKLTVTYPTVVIQKSGKQMI
VEEAAIIDETQLGKRGYLTPSSAKAHIEALWNNEGFFLSKLFSGMMVSEDSHFNPEMFFL
DKLVVPPSRYRPVSFVGDQMFANGQTVNLQAVMKDAQLARKLLAFMAQDLKQSMQSEEGE
IQKPGEQPLELLDRSVLVTIPGQTVADKLYNIWIRLQSHVNILFDSDMDKLMSEKFPGVR
QILERKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVH
ELRQAVINGPGVHPGASMVINEDGSRTILSSTSQTQREAIAKQLLTPSTGAPKPGIKTVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFP
QNELGRAEAYVLACTDEQYLVPKDGKPLAGLIQDHMVSGTSMTTRGCFFTREQYMELVYQ
GLTDKKGRVKLLPPAIIKPHPLWTGKQVVSTLLTNVIPEDWPLLNLSGRAKIDGRAWVTA
SGPGIYPSGLDFMCESQVIIQNGELLCGVLDKAHYGSSAYGLVHCCHDVYGGETSGKVLT
ALARLFTAYLQFYRGFTMGVEDILVKPKADHRRRKIMKECTRCGSKAIKAAFNLPETSSG
EQARGKWQDAHLHKDQRNFNMVDLKFKEEVNHYSNEINKVCVPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLIVHYDLTVRDSDGSIVQFLY
GEDGLNVPKIQFLQPKQFPFIADNFKVIEKSKHLDEVLSKMDPRHAKEQFRSIKRWQVKH
QQTLRKGAFLLFCQKKMASVMAQIPTGELENSRETKTLQLLKMWYGLNETRRSKYQKKAA
KCPDPCLGIWQPDIYFASVSETFENDVENFLTEWNTRNDRGYCKSELSSERLKDLLHLKW
QQSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASTNIK
TPMMSIPVLNTKRAHKRVKRLKKQLTRVCLGEVLQNVDIQESMCLEMNLNKHLVYTIKFT
FLPHECYGDEICVKPRNILNFMETSFFKILLETIKRKSSKLISYNNVGTQRANHRDLGSD
GKVGASQENQDDQEAEEEGRVPDGEIDEGDADATDAKRREKQEEEVDYESDEGAVEEDEI
PDKEEAALCDGDRDPEAAETQEDTSAPFSNEQFQNKRKTLDKLTDHRVNTVLESHSAIES
YAYDTDNELWCEVTLKLPLSKEYFDLASLLTSLANKTVIHETKGITRCLLNETTIKKEEK
ALMLQTEGINLPELFQYTDILDLKKLYCNDIHAMANTYGIEAALKVLEKEIKDVFAVYGI
AVDPRHLSLVSDYMCFEGVYKPLNRFGMQSSSSPLQQMTFETSYKFLKEAAMLGSHDELQ
SPSACLVVGKVVKGGTGLFDLKQPLK
NT seq 5121 nt   +upstreamnt  +downstreamnt
atggcggcggcgagggaagcgccgtggcgccggctgactggcctgaccttcggcgtgtat
cgggcggcggaaatcgagaagctgagtgtaaaatcaataaccaacccacgtttcctggat
aatgcaggcactgcattacccaatggattgtacgacttggctttgggaccacttgacaac
aaggaagtgtgtgcaacttgtgtacaggacttcaacaactgtccagggcacctaggttac
acagatctgcctctcactgtctataatcctctcttttttgataaattattccttctgata
cgaggttcttgcttgagctgttgccatctgacatgtcctcgtgctgtgattcatttattg
cttaaccagctgaagctcttggacgtaggactgcttgaagctgtgtatgaccttgaggct
gtcctaagcaggtttttagaggaaaatgcaggcgcacttgagatagacatagaagaaatg
ttaagccagcacacaaaagaaattctccaaaataaccagctaaaggaccaaggttcaaat
gtaaaaaacgtatgtgagtgtaaaagtaaactgatatcccagttttggaaatcgcacaca
agttcaaagagatgccccaactgcaaagctgaaagatcacttgtccgaaaagaacataat
agcaaactcactgtgacttatcccaccgtggtaatccagaagtcaggcaaacagatgatt
gtggaggaagctgcaatcatagatgaaactcaactgggaaagcgaggttacctgacacct
agcagtgccaaagcccatattgaagctttgtggaataacgaaggttttttcctctccaaa
cttttctctggtatgatggtcagtgaagattcacatttcaatcctgagatgttctttctg
gataaacttgttgttccaccatctaggtatcgtccagtgagttttgttggagaccagatg
tttgcgaatggtcagacggtgaacttgcaagctgttatgaaagatgctcagttagcacgg
aaacttttggctttcatggctcaagatctgaagcaatcaatgcaaagtgaagagggagaa
atccagaagccaggggagcagcccttggaactcctggaccgttctgtcttggtgacaatc
cctgggcagacagtggcagataagctttacaacatctggattcgtcttcagagccatgta
aatattttgtttgacagtgacatggacaagctcatgtctgaaaaattccccggtgtgcga
cagattttagaaagaaaggagggcctgtttcgcaagcatatgatgggcaaacgagtggat
tatgcagctcggtcagtcatttgccccgacatgtacattgggaccaatgagattggcatt
cctatggtctttgctacgaaactgacctatcctcaacctgtaactccttggaacgtccat
gagctgaggcaggctgttataaatgggcctggtgtgcacccaggtgcctccatggtcatc
aatgaagatgggtctcgcaccatcttgagttcaaccagtcagacccaaagagaagccata
gccaagcaactcttaactccttccactggggcaccaaaaccaggaataaaaacagtgtgc
cgccatattaaaaatggagatgtccttttgctgaatcgccagcccacccttcatagaccc
tctatccaagctcatcgagccaggattcttcccgaagagaaggttctgaggcttcattat
gccaattgtaaagcttacaatgctgactttgatggggatgaaatgaatgctcacttccct
cagaatgagctaggtcgagcggaagcctatgtcttggcttgtactgatgagcagtatctt
gttccaaaggatgggaagccattagcaggcttgatccaggatcacatggtctctggtacc
agcatgaccacacgaggctgcttctttacccgagaacagtacatggaactggtgtatcaa
ggactgaccgacaaaaagggaagagtgaagcttctgcctccagctattataaagccacat
cctttgtggacgggaaagcaggttgtttctacattgcttacaaatgtaattccagaggac
tggcctctgctgaatttgtcaggaagagctaaaattgatggaagagcctgggtgacagcc
tctggcccaggaatttacccatcaggtcttgactttatgtgtgaatctcaggttatcatt
caaaatggggagctgctctgtggggtcttggacaaagctcactatggtagctctgcctat
ggtttggtccactgctgccatgatgtctatggtggtgagacgagtggaaaagtgctgacg
gctctggctcggctcttcacagcctacttgcagttctacaggggctttacaatgggagta
gaagatattttggtcaaaccaaaagcagaccacagaagacggaagatcatgaaagaatgt
acccgttgtggttcaaaggccattaaagctgcatttaacttgccagaaacctcctcaggt
gagcaggccagagggaagtggcaggatgcccacctccacaaagaccagagaaactttaat
atggtcgatctgaaattcaaagaggaagtgaaccattacagcaatgaaattaacaaggtg
tgcgtgcctctagggcttcaccggagtttccctgagaataatttgcagttgatggtgcag
tcaggggccaaaggatctactgtgaatactatgcagatttcttgcttgctgggccagatt
gagttagaaggtcgaaggcccccgttaatgccgtctggcaaatcgttgccatgttttcag
ccttacgacttttccccccgatcgggaggatttgtgactgggagatttctcactggcatc
aagcctgcagaattcttctttcattgcatggctggtagagagggactggtggatactgct
gtcaaaaccagccgatctgggtaccttcaaaggtgtattataaagcatttggaagggctg
atagttcattatgacctgactgtacgagacagcgatggcagcattgtgcagtttctctat
ggagaagatggcttaaacgttcctaaaatacaattcctgcaacccaagcagtttcctttc
attgcagataacttcaaggtaatagagaaatctaaacatttagatgaagttctgtcaaaa
atggaccctcggcatgcaaaggaacagttcaggtccatcaagagatggcaagtcaagcac
cagcagactctcagaaaaggagcctttttgctgttttgtcagaaaaaaatggcaagtgta
atggcccagatccctacaggagaacttgaaaatagtcgagaaactaaaactctacagttg
ttgaagatgtggtatggactgaatgagacgagacggagcaagtatcagaaaaaggcagca
aaatgtcctgatccctgcctgggtatctggcagccagacatctattttgcatcggtgtca
gaaacatttgaaaatgatgtagagaatttccttacagaatggaacactcggaatgaccgc
ggctattgtaaatctgaactttcttcggagagattaaaggacttgttgcatttaaagtgg
cagcagtcactctgtgacccaggagaagctgtgggtctccttgctgctcagagcattgga
gagccctccacacagatgactctgaacactttccactttgctggaagaggcgaaatgaat
gttactctcggtatcccaaggttgcgggagatcctgatggtagccagtactaatattaaa
accccaatgatgagtattcctgtccttaataccaagagagctcataagagggtgaagaga
ctcaagaaacagcttactagagtgtgcttaggcgaggtgttacagaacgtggatattcag
gagtcaatgtgtttggagatgaatcttaacaagcacctcgtctacactatcaaatttact
tttttgccacatgaatgttatggggatgagatatgcgtgaagccaaggaacatcttgaac
tttatggagacaagtttcttcaaaatcttactggaaacaattaagaggaagagttcaaag
ctgatctcatataacaatgttggtactcagcgagcaaatcatagggacttaggtagtgat
ggaaaagttggagcatcccaagaaaaccaggatgaccaagaagctgaggaagaagggaga
gtacctgatggagaaattgatgaaggggatgctgatgctacagatgcaaaaagaagggag
aagcaggaagaggaggttgattatgagagtgatgagggcgctgtggaggaggatgaaatt
ccggataaggaagaggctgcactgtgtgacggtgacagggatccagaagcagctgaaact
caggaagatacttctgcccctttctctaatgagcagtttcagaacaagagaaagactttg
gataagttgactgatcacagagttaataccgtactggagagtcacagtgctattgaaagc
tatgcatatgacacagataacgaactgtggtgtgaggtcactttgaaacttccactgtca
aaggagtacttcgacttggcttccctgctgacttccctggcaaacaaaacagttatccat
gagaccaaggggatcacacgatgtctcttaaatgaaaccaccatcaaaaaagaagagaag
gcactcatgttacaaacggaagggataaaccttcctgagctcttccaatacactgacatt
ttggatttgaagaagctttattgcaatgatattcatgcaatggctaatacttacggcatc
gaggctgccttgaaagtccttgagaaagagattaaagatgtgtttgctgtgtacgggatt
gcagtagatcctcggcatctctctctggtgtctgactacatgtgctttgaaggtgtttac
aaaccacttaatcggtttggtatgcagtccagttcttctccattgcagcaaatgacattt
gagaccagctacaagttcttgaaggaagcagcaatgctgggctcccatgatgagctacaa
tctccttctgcttgcctagtggttgggaaagttgtcaaaggaggaactggattgtttgat
ctcaagcagcctcttaaatag

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