Eublepharis macularius (Leopard gecko): 129340307
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Entry
129340307 CDS
T09084
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
emc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129340307 (CASC3)
03015 mRNA surveillance pathway
129340307 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129340307 (CASC3)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129340307 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129340307
NCBI-ProteinID:
XP_054850999
UniProt:
A0AA97LD63
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All DBs
Position
12:37953563..37973381
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AA seq
710 aa
AA seq
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MADRRRQRASQDSSEEDESDSPPGSAAPSPRGPHRLGLAGPGAAGAGSGHGEVESAEAAA
EPLAGGASPADSECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEETSKVDLKQDSNDTN
ELATKTDKGDEKTEPKGTVAGERQSGDGQESTEPTENKVGKKVPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRMRKPRFGSPPQREPNWANERPSKPPRHQSHDSTPVPPRTFINRNSA
GTGRMPLPRTFPRTGHKDTRSSYHAVDVNIQHTPHFGEQSKRESNYRIRRSEPVPAREPS
PEAEVVHVRSSPVKKEEGLAESPIAPADALQPPPDRPIEKKSYSRARRSRTKAGETGKLA
DEVPPPLGLTPAPLKTAEVIPSPSPAKTENWEVPVEASLDDLEQDMTQLNITEQNWNQGQ
PQFIQPQSIPNQMHIGAAPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPAPPVHISIME
GHYYDTLQFQGPIYTHGENPAPLPPQGVIVQPEMHLPHPGLHPHQAPAPLTNPGLYPPVS
LPPGQQPPPPPPPQQLLAPTYFSPAPGVMNFGSPGYPYPPGALPPPPPPHLYPNTQAQSQ
VYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRVPVNVSKRF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtcggcggcaacgcgcctcacaagatagcagcgaagaggacgagtccgac
tcgccgcccggcagcgccgctccttccccacgcggccctcaccgtctcggcctggctggc
ccgggtgccgctggcgccgggagcggccacggtgaggtcgagagtgcggaggcggccgct
gagccgctggccgggggagccagcccggcagactcggagtgtgaaagcgaagatggcata
gaaggagatgctgttctctctgactatgaaagtgctgaagattctgagggtgaggagggg
gaatacagtgaggaagaaacatctaaagtggacctgaagcaggacagcaatgacactaat
gagttggcaacaaagacagacaaaggggatgaaaaaacagaacctaaaggcactgtggca
ggcgagaggcaaagcggggatggccaggaaagcactgaaccaactgaaaataaagttggc
aaaaaagttcccaagcacctggacgatgatgaggaccgcaagaatcctgcatacatacct
cgcaaaggtctcttctttgaacacgaccttcgtgggcagacccaggaagaagaagtccgt
cctaagggtcggcagcgtaagctgtggaaagatgaggggcggtgggaacatgacaagttc
cgagaagatgagcaagcaccaaaatcaaggcaggagctgattgcactgtatgggtatgat
atccgctcagctcataaccctgatgacatcaagcccaggaggatgcgcaaaccaaggttt
gggagtccacctcagagagagccgaattgggctaatgagcggcctagcaagccaccacgt
caccaaagccatgacagtacccctgtaccacctcggacattcatcaaccgaaactctgca
gggacaggacggatgcccctgccaaggactttccctagaactggccataaagatacccgt
tcaagctaccatgctgtggatgtaaacattcagcatacgcctcatttcggcgagcagtcc
aagcgcgagagcaattaccggatcaggcgctcagagccagttccggcaagagagccttct
cccgaggcagaagtcgtacatgttcgaagcagccctgtcaaaaaggaagagggtcttgca
gaaagtccaatcgctcctgcagatgctttgcagccacctcccgataggcccatagaaaag
aagtcctattcgcgagcaaggagaagccggaccaaagcaggcgagacagggaaattggca
gatgaagtcccaccaccgttggggttgacacctgcaccactaaaaactgcagaggttata
ccatctccttcgccagcaaagactgagaattgggaggtacctgttgaagccagtctagat
gatctcgagcaagacatgacccagttgaatataacagaacagaactggaaccaagggcag
ccccagttcattcaacctcagagtattcctaatcagatgcatattggagcagccccacct
cctcagttcaaccggatggaagagatgggagtccagggaggccgtgcaaagcgttactcg
tcacagcgccagaggcctgtcccagagcctgctccacctgtgcacatcagtataatggaa
ggacactactatgacacactacagttccagggtccaatctacacccacggtgagaaccct
gccccactgcctccccaaggggtgattgttcagcctgaaatgcatcttccccatccagga
ttacatcctcaccaggcgcctgcacctttgactaatcccggcttgtatcctccagtctct
ctgcctcctgggcagcagcccccgcccccgcccccacctcagcaactactggcacccact
tacttctcccctgctccaggagtaatgaattttggcagtccaggttacccttaccctcca
ggagctctcccgccacccccacctcctcatctctatcccaacactcaagcccagtctcag
gtgtacggaggggtcacctattacaacactgttcagcagcaagtccagccgaagccttct
cctccccgaagaacctctcagccagtcaccatcaagccaccccctcctgaggtggtaagc
agggttcccgttaacgtttctaaacgcttttga
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