KEGG   Eublepharis macularius (Leopard gecko): 129340307
Entry
129340307         CDS       T09084                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03013  Nucleocytoplasmic transport
emc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129340307 (CASC3)
   03015 mRNA surveillance pathway
    129340307 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:emc03019]
    129340307 (CASC3)
Messenger RNA biogenesis [BR:emc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     129340307 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 129340307
NCBI-ProteinID: XP_054850999
UniProt: A0AA97LD63
LinkDB
Position
12:37953563..37973381
AA seq 710 aa
MADRRRQRASQDSSEEDESDSPPGSAAPSPRGPHRLGLAGPGAAGAGSGHGEVESAEAAA
EPLAGGASPADSECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEETSKVDLKQDSNDTN
ELATKTDKGDEKTEPKGTVAGERQSGDGQESTEPTENKVGKKVPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRMRKPRFGSPPQREPNWANERPSKPPRHQSHDSTPVPPRTFINRNSA
GTGRMPLPRTFPRTGHKDTRSSYHAVDVNIQHTPHFGEQSKRESNYRIRRSEPVPAREPS
PEAEVVHVRSSPVKKEEGLAESPIAPADALQPPPDRPIEKKSYSRARRSRTKAGETGKLA
DEVPPPLGLTPAPLKTAEVIPSPSPAKTENWEVPVEASLDDLEQDMTQLNITEQNWNQGQ
PQFIQPQSIPNQMHIGAAPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPAPPVHISIME
GHYYDTLQFQGPIYTHGENPAPLPPQGVIVQPEMHLPHPGLHPHQAPAPLTNPGLYPPVS
LPPGQQPPPPPPPQQLLAPTYFSPAPGVMNFGSPGYPYPPGALPPPPPPHLYPNTQAQSQ
VYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRVPVNVSKRF
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggcggaccgtcggcggcaacgcgcctcacaagatagcagcgaagaggacgagtccgac
tcgccgcccggcagcgccgctccttccccacgcggccctcaccgtctcggcctggctggc
ccgggtgccgctggcgccgggagcggccacggtgaggtcgagagtgcggaggcggccgct
gagccgctggccgggggagccagcccggcagactcggagtgtgaaagcgaagatggcata
gaaggagatgctgttctctctgactatgaaagtgctgaagattctgagggtgaggagggg
gaatacagtgaggaagaaacatctaaagtggacctgaagcaggacagcaatgacactaat
gagttggcaacaaagacagacaaaggggatgaaaaaacagaacctaaaggcactgtggca
ggcgagaggcaaagcggggatggccaggaaagcactgaaccaactgaaaataaagttggc
aaaaaagttcccaagcacctggacgatgatgaggaccgcaagaatcctgcatacatacct
cgcaaaggtctcttctttgaacacgaccttcgtgggcagacccaggaagaagaagtccgt
cctaagggtcggcagcgtaagctgtggaaagatgaggggcggtgggaacatgacaagttc
cgagaagatgagcaagcaccaaaatcaaggcaggagctgattgcactgtatgggtatgat
atccgctcagctcataaccctgatgacatcaagcccaggaggatgcgcaaaccaaggttt
gggagtccacctcagagagagccgaattgggctaatgagcggcctagcaagccaccacgt
caccaaagccatgacagtacccctgtaccacctcggacattcatcaaccgaaactctgca
gggacaggacggatgcccctgccaaggactttccctagaactggccataaagatacccgt
tcaagctaccatgctgtggatgtaaacattcagcatacgcctcatttcggcgagcagtcc
aagcgcgagagcaattaccggatcaggcgctcagagccagttccggcaagagagccttct
cccgaggcagaagtcgtacatgttcgaagcagccctgtcaaaaaggaagagggtcttgca
gaaagtccaatcgctcctgcagatgctttgcagccacctcccgataggcccatagaaaag
aagtcctattcgcgagcaaggagaagccggaccaaagcaggcgagacagggaaattggca
gatgaagtcccaccaccgttggggttgacacctgcaccactaaaaactgcagaggttata
ccatctccttcgccagcaaagactgagaattgggaggtacctgttgaagccagtctagat
gatctcgagcaagacatgacccagttgaatataacagaacagaactggaaccaagggcag
ccccagttcattcaacctcagagtattcctaatcagatgcatattggagcagccccacct
cctcagttcaaccggatggaagagatgggagtccagggaggccgtgcaaagcgttactcg
tcacagcgccagaggcctgtcccagagcctgctccacctgtgcacatcagtataatggaa
ggacactactatgacacactacagttccagggtccaatctacacccacggtgagaaccct
gccccactgcctccccaaggggtgattgttcagcctgaaatgcatcttccccatccagga
ttacatcctcaccaggcgcctgcacctttgactaatcccggcttgtatcctccagtctct
ctgcctcctgggcagcagcccccgcccccgcccccacctcagcaactactggcacccact
tacttctcccctgctccaggagtaatgaattttggcagtccaggttacccttaccctcca
ggagctctcccgccacccccacctcctcatctctatcccaacactcaagcccagtctcag
gtgtacggaggggtcacctattacaacactgttcagcagcaagtccagccgaagccttct
cctccccgaagaacctctcagccagtcaccatcaagccaccccctcctgaggtggtaagc
agggttcccgttaacgtttctaaacgcttttga

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