Eublepharis macularius (Leopard gecko): 129340655
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Entry
129340655 CDS
T09084
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03420
Nucleotide excision repair
emc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129340655 (ERCC4)
03460 Fanconi anemia pathway
129340655 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emc03032
]
129340655 (ERCC4)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129340655 (ERCC4)
DNA replication proteins [BR:
emc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129340655 (ERCC4)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
129340655 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
129340655
NCBI-ProteinID:
XP_054851544
UniProt:
A0AA97KAP0
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Position
12:complement(16684798..16708322)
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AA seq
902 aa
AA seq
DB search
MAAASSSVPLEHETQIFLDLFHQDGLVICARGLGIDRLLLRFLRLYCVPASLVLVLNTSP
AEEEFFIDQLRRCNVAHLPRRITNEIPSNSRYEVYMQGGIVFATSRILVVDFLTGRIPSD
LITGILVYKAHRIIESCQEAFILRLYRQKNKQGFVKAFSDNAVAFNTGFCHVERVMRNLF
VRKLYLWPRFHVAVHSFLEQHKPEVVELHVNMTPAMRTIQSSILDILNACLKELKNCNPA
LEVEDLSLENAIGKSFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCITF
LNLLESLRASEKAFGQNSGWLFLDSSTSMFLNARARVYHLTDNKENKKRKAAGKTDVEEE
KGQKRVLILESNPKWEALREVLKEIETENASSEALGGPGRTLICAGDDRTCAQLKEFITV
GASAFLMRLYHKTFGKDKEAGEVFLKERKAAECQDEGGREPWPKKAKKKSSKPKKSQRKR
ELTLTQMMGKCEQDTMGERDSYEEVSSGQESGGEVRPEDFVLDLPSESCYGILKEPLTVI
HPLNGCSDPYALTRVLHEVDPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGST
EEQRYLTTLRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDATPAAVSTDTRKAGG
QDQKSVQHSIVVDMREFRSELPSLIHRRGIDIDPVTLEVGDYILTPDICVERKSISDLIG
SLNNGRLYGQCVSMCRYYKRPVLLIEFDPSKSFSLAPRASLRQEISSSDVTSKLVLLTLH
FPRLRLLWCPSPYATAELFEELKQNRPQPDSLTAAAITADSESIPESDKYSPGPQDFLLK
MPGVNAKNCQAILNHINSLAELMTLSQDKLAELLGNTNSAKQLYEFIHLPYTEAVSQGKA
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcttcgtcgtcggtgccgctggagcacgagacccagatcttcctggatctt
ttccaccaggacgggctggtgatctgcgcccgggggctgggcatcgaccgcctcctgctg
cgcttcctgcggctctattgcgtgcccgccagcttggtcttggtgctgaacaccagcccc
gcagaggaggagttctttattgaccagctgaggaggtgtaatgtagctcatcttcctcgg
cgcattacaaatgaaatccccagcaacagtcgctatgaagtatacatgcaagggggcatc
gtatttgctactagccgcatccttgtggtggattttctaacaggcagaattccttctgat
cttattactggcatcctagtgtacaaagcccacagaatcattgaatcttgccaagaggcc
tttatcctgcggctctatcggcagaagaacaagcagggtttcgtcaaagccttctctgac
aacgccgttgcctttaacactgggttttgtcatgtggaaagagtgatgaggaatctcttc
gtcaggaagctttacctgtggccaaggtttcacgtggcagtgcactcctttttagaacag
cacaagccagaagtggtggaattgcatgtgaacatgactccggccatgcgcaccatccag
agttcaatcctggacatcctgaacgcctgtttgaaagaactgaagaattgtaaccctgct
ctggaggtagaggatctgtcgctggaaaatgcaatcggcaagtcttttgacaagactatt
cgtcactatctagaccctctttggcaccagcttggagcgaagaccaaatcattggtccag
gatttgaagattcttcggactttgctgcagtatttaactcagtatgactgcatcacgttt
ctgaaccttttggaatccttgagagcctcagaaaaagccttcggtcagaattcaggctgg
ctttttcttgattccagtacttccatgtttctgaacgctcgggctcgagtttatcacctt
acagataacaaggaaaataagaaaagaaaagctgctggaaaaacagatgttgaggaagaa
aaagggcagaaaagggtattgatcttggaaagcaatccgaagtgggaggccctgagagag
gtgctcaaggagattgagacggagaatgccagcagtgaagctcttggtgggccaggacga
acgcttatctgtgcaggggatgaccgaacatgtgctcagctgaaggagtttatcactgtt
ggggccagtgcttttttaatgagactctaccacaaaacctttgggaaggacaaggaagct
ggtgaggtattcctgaaggaacggaaggcagccgagtgccaggatgagggtggtagagaa
ccttggccgaaaaaagccaaaaagaaatcctcaaagccaaagaaaagccaaaggaagcga
gagttgactctcacacagatgatgggcaagtgcgagcaggatactatgggggaacgagac
tcctacgaagaagtcagcagcggccaagagagtggtggggaagtcagacctgaagacttt
gtgctggacctgccttcagaatcctgttacgggatcttaaaggagccgttgaccgtaatc
catcccttgaatggctgtagtgacccctatgctctcacgcgggtcttgcacgaggtggat
ccccggtacgtcgtcttgtatgatgcagagctgacttttgtccgccagctagagatttac
aaggccagcagacctgggaaacctttgagagtttacttccttatatatggagggtccaca
gaagaacagcgctatctgaccacgctaaggaaggaaaaagaagcattcgaaaaactcatt
cgagagaaggccagcatggtcatccctgaagaacgagaaggaagagatgagaccaatttg
gatctagtcagggatgctactccggctgctgtttccaccgatacacgtaaagcaggtggc
caggatcagaagagcgtccagcatagcatcgtggtggacatgcgtgaattccgcagtgag
cttccctctttgatccatcgccggggcatcgacattgaccccgtgaccttggaagtcggc
gactacatcctcacacctgacatttgcgttgagcgcaagagcatcagtgatttgattggt
tccctcaataatgggaggctttatggccagtgcgtctccatgtgccgctattataagcgc
cccgtcctcctcatcgagttcgaccccagtaaatccttctctctcgccccgcgggcttcc
ctccgccaagagatctccagcagtgacgtcacttccaaacttgtcctgctgacccttcac
ttcccccggctccggctcctctggtgcccttctccttatgccaccgcagaactgtttgag
gagctgaaacagaaccggccccagcctgactcattgacggcagcggctattacagcggat
tcagaaagcatccccgagtcagacaaatacagcccaggcccccaagacttcttgctaaaa
atgccaggggtgaatgccaaaaactgccaggcgatactgaaccacatcaacagcctggcg
gaactcatgacgctctctcaggacaaattggcagaactgctgggcaacactaacagtgcc
aagcagctgtatgaattcattcatttgccatacacagaagctgtttctcaagggaaagcc
aagaggtga
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