Eublepharis macularius (Leopard gecko): 129341002
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Entry
129341002 CDS
T09084
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129341002 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129341002 (TRIM54)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129341002 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
RHH_9
Sina_RING
Prok-RING_4
UvrD_C
CagA
Zn_ribbon_FGT1_2
DUF5799
DUF4363
DUF1664
Motif
Other DBs
NCBI-GeneID:
129341002
NCBI-ProteinID:
XP_054851846
UniProt:
A0AA97KB13
LinkDB
All DBs
Position
1:complement(224850068..224881142)
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AA seq
383 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQHLMCEEHEDEKINIYCLTCETPTCSMCKVFGAHKDCEVAPLTNVYKRQKGELSDGIAM
LVAGNDRIQAIITQMEEICKTIEDNGRRQKQHLCLRFDSLYSTLEERKKELLQEIGREQE
EKVQLVRELIRQYGDHLEVSSKLVESAIQSMEEPQMAVYLQQSKELIKKITDMSKVSMSS
RPEPGYESMDHFSINVDHVAEMLRTIEFQTDITGEDTEAEGPGPEGGDAAGEEEHPEGLD
APEGTEDVGLRPKPASASHAGQH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctggggacctcgcagagcatggacaatctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcctgttgtgatcctg
ccctgccagcacaacctgtgccgtaaatgtgccaatgacatcttccaggcctccaaccct
ctgtggcaatcgcggggctccacttcagtgtcctccggcggtcgattccgatgcccctct
tgccgccatgaagtggtgctggaccgacatggagtgtatggcctgcagcgcaaccttttg
gtggaaaatataattgatatctacaagcaagaatcctctcgacccctccatgccaaggcg
gagcaacatctgatgtgtgaggagcatgaagatgaaaagatcaacatctattgcctcacc
tgtgagacccccacttgttccatgtgcaaagtcttcggagcccacaaggactgtgaagtg
gcccctctgaccaacgtctacaaacgacagaagggggagctgagcgatggcatcgccatg
ttggtagcggggaatgaccgaattcaggcaatcatcacacagatggaggagatttgcaaa
accatagaggataacggacgtcggcagaagcagcacctgtgcctgcgctttgactccctg
tacagcaccctggaggagcgcaagaaggagctgctccaggagatcggacgagagcaggag
gagaaggtccagctggtgcgagagctcattcgccagtacggggaccacctcgaggtctcc
tccaaactggttgagtcagccatccagtccatggaagaacctcagatggctgtctacctc
cagcaatccaaggagctgattaaaaaaatcacagacatgtccaaagtatccatgagcagc
cgtccagagcctggctatgaaagcatggaccacttttccatcaatgtggaccatgtggct
gaaatgctgagaacaattgaattccagacagatattaccggggaggatactgaagcagaa
ggacctggcccagaaggaggcgatgctgcaggagaagaggagcacccggaagggctggat
gctcctgaagggactgaagatgtggggttgagacctaaaccagcaagtgcctcacatgca
ggtcagcactga
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integrated database retrieval system
