Eublepharis macularius (Leopard gecko): 129341052
Help
Entry
129341052 CDS
T09084
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129341052 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
129341052 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129341052 (THOC2)
03041 Spliceosome [BR:
emc03041
]
129341052 (THOC2)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129341052 (THOC2)
Spliceosome [BR:
emc03041
]
Complex C
Other components
EJC/TREX
129341052 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129341052 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
129341052
NCBI-ProteinID:
XP_054851924
UniProt:
A0AA97KAH5
LinkDB
All DBs
Position
13:32069747..32136038
Genome browser
AA seq
1608 aa
AA seq
DB search
MAAATVVAALPDEWIKNWEKSGKSEFLQLCRSLSENKSHDNVTFRGIQQALYELAYHVVR
GNLKHDQASNVLNDVIEFRDDMPSILADVFCVLDIETSCLEEKNKRDQFMQLVLACLYLV
SDTILKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAE
LGQDLSGNITSELILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYM
CEPQTLCHILGFKFKFYQEPNGETPVSLYRVAAVLLQHNLIDLEDLYVHLLPTDNTILEE
HKREIGEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEAMLKIGDW
QHAQSIMDQMPPFYATSHKPIAVALCQLLHVMIEPLYRRLGVPKGAKGTPIPPLQNKRAP
KQVENFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEYQSDGSKQEDKEKMEL
LFSCLLSITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLL
VKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVV
DSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELA
GLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQ
IRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLV
QFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEK
GNKQQQKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSS
YEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQSEHVQRVLQRLKL
EKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYD
RVFSDIIYTVASCTENEASRYGRFLCCMLDTITRWHSDRAIYEKECGNYPGFLTILRTTG
CDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVA
NLGTALERRVQKICQDEKEKRPDLYALAMGYSGQLKSRKHCMVPENDFHHKDPPTRNAVP
TTVQNGPGGAALPPLLTINAAKLEESTAEETDKLKEKSQGAVKVINKAASATPKVTASNG
NSAANSKVIKEKEEKEKCGKEKDKEKKEKTPAATPEAKSLGKDGKEKPKEERVNKEDKAR
DTKEKTPKSDKEKEKAKREEKSSKDEKSKITVTNAESKSTAEKEREKEPSRERDLTKDMK
SKENIRGGGGGGGGGGGEKAPVAGSLKSPVPRSEASDSEREQKRRKVDTHSSPSHSSTVK
DNLSELKDSSAKHYINHSAPTLSKSKEREVEKKDLDKSRERSREREKKDEKERKDRKRDH
SNSDREVPQDSTKRRKEENGTTVSSKHSKSESPSDSPRSNEKEKEKNKSKSSSKEKGESI
KVEKMEKSSSASKKESRHDKEKTEKKDKRDSTGGKEEKKHHKSSDKHR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggtggtggcggcgctccctgacgagtggataaagaactgggagaaa
tcgggcaagagcgagttcttgcagttatgtcgttctctctctgaaaacaaaagccatgat
aatgtgacttttagaggtattcagcaggctctgtatgagcttgcttaccatgttgtgaga
ggaaatctaaagcatgatcaagcatcaaatgttctcaatgatgtcatagaatttcgagat
gatatgccctccatcctagctgatgtattctgcgtattagatattgaaactagttgttta
gaagaaaaaaataagagagatcagttcatgcagctggtgttagcgtgtttgtatttagtt
tcagacactatactaaaagagcgtctggacccagaaacattagaatcattagggcttatc
aaacagtctcagcagttcaatcagaaatctgtgaaaatcaagacaaaacttttttataag
caacagaaattcaatttattaagagaagagaatgaaggttatgcaaagctcattgccgag
ctggggcaagatttatctggaaatatcactagtgagctgatcctagaaaatatcaaatct
ttaataggatgttttaacctggatcctaacagggtgttggatattatcttagaagtctat
gaatgtaggccagaatatgatgaattctttgtacctttgatagagtcctacatgtatatg
tgtgaaccacaaacactctgtcatatccttgggttcaaattcaagttttatcaggagcca
aatggggagactcctgtctctttatacagagttgctgcagttcttttgcaacataatcta
atagatttggaagatctttatgttcaccttcttccaacagataatactatccttgaagaa
cacaaacgagaaattggagaagccaaacaaattgtgaggaaacttacaatggttgtattg
tcttctgaaaagactgaggagaaggagaaagaaaaggagaaggaagaggagaagacagaa
aagccacctgataaccagaaactgggtttattagaagctatgttaaaaatcggtgattgg
cagcatgcccagagcattatggatcagatgcctccattttatgcgacttcacacaagcct
attgctgttgctctttgtcagcttcttcatgtgatgattgagcccctctataggagactt
ggagtgccaaaaggtgctaaagggacacctattcctcctttgcaaaacaagagagcacca
aagcaagtagaaaactttgaagatttaagaaaggaagtattcaacatgctttgttacctt
ggacctcatctctcccatgatcctattttatttgcaaaggtggtgcgtcttggcaaagct
tttatgaaagagtaccaatctgatggaagcaagcaagaggataaggagaaaatggaatta
ttattcagttgtttgctgagtattacagatcaggtcttgctcccttctcttaccttgatg
gactgtaatgcatgcatgtcagaagaactctgggggatgtttaaaacatttccataccag
caccggtaccgtctctatggccagtggaagaatgaaacgtataatagccacccactgcta
gtgaaagttaaagctcagacaattgacagagccaaatatattatgaagcgtctaaccaag
gaaaatgtgaagccttctggaagacaaattgggaaattgagccacagcaatccaacaatt
ttatttgattatattttgtctcagatacagaagtatgataacctaataacgccagttgtt
gattcattgaaatacctcacttcgctgaattatgatgtcttggcatattgcattattgaa
gcattggctaatcctgaaaaggagaggatgaaacacgatgacactacaatttccagctgg
ctacaaagtttagctagtttctgtggtgctgtttttcgaaaataccctattgaactggct
ggtctactccagtatgtggcaaatcagttaaaggctggaaaaagttttgacctacttatt
ttgaaagaggtagtacaaaaaatggctggcatagaaatcacagaagaaatgaccatggag
cagctagaagccatgacggggggagaacaactcaaagcagagggtggctattttggccaa
atcagaaacactaagaaatcttctcagagattaaaagatgcacttttggatcatgatctt
gcccttccactgtgccttctcatggctcagcagcgaaatggtgtgatctttcaagaagga
ggagagaaacatttgaaacttgtgggaaaattgtacgatcagtgtcatgacactctggta
caatttggtgggtttttagcatccaacttaagcacagaggattatattaagcgagtgcct
tctattgatgttctgtgtaatgagttccatacccctcatgatgctgcatttttcctttcg
aggcctatgtatgcacaccatatttcatcaaaatacgatgaactgaaaaaagctgagaag
gggaacaaacagcaacaaaaagttcacaaatacattacatcatgcgaacttgtgatggct
cctgttcacgatgcggtgatctccttgcaccttcccaaggtttgggatgacatcagccca
cagttctatgctacgttctggtcactgacaatgtacgacctcgctgtgcctcacagtagc
tatgagagggaagtcaacaaactcaaagtccagatgaaagcaatcgatgacaatcaggaa
atgcctccaaataaaaagaaaaaagaaaaagagcgctgtacggcccttcaggataagctt
cttgaagaagagaagaaacaatctgagcatgtgcaaagggtgctgcaaaggttgaagctg
gaaaaagataattggcttcttgcaaagtctaccaaaaatgagaccataacgaaatttcta
caactgtgtatatttcctcgctgcattttctctgccattgatgctgtctactgtgcccgc
tttgtagaactggtgcatcaacagaaaacgccaaatttttccacacttctttgctatgac
agagtattctcagatataatctatacagtagcaagctgtactgaaaatgaagctagtcgc
tatggcaggtttctttgctgtatgctggatactataacacggtggcatagtgatagagct
atatatgaaaaggaatgtggtaactatccaggcttcctcactatattacgaacaactggt
tgtgatggtgggaacaaagctgaccagttagattatgaaaattttcgacatgtggtacac
aagtggcattataagttaaccaaggcgtctgttcactgcctcgaaacgggtgaatataca
catatcagaaatatcctgattgtgctgaccaaaatcttgccatggtatcccaaagttgca
aacctaggcacggcattggaaagaagggtccagaaaatttgtcaagatgagaaagagaag
agacctgatctctatgcattagctatgggctactctggacagttgaaaagtagaaaacat
tgtatggtccccgaaaatgatttccaccataaagacccacccaccaggaatgcagtacct
actacagtgcaaaacgggccaggtggagctgcgctgcctcctttgctgacaataaatgca
gctaaactggaagaaagcactgctgaggagactgataaattaaaggagaaatctcagggt
gctgtaaaagtaattaataaagctgccagtgcaacaccaaaggtgactgcaagcaatggg
aacagtgctgctaacagcaaagttattaaagaaaaagaagaaaaagagaaatgtgggaag
gaaaaagacaaggagaaaaaagagaagactcctgctgccactcctgaggccaaatctctt
ggaaaggatgggaaagagaaaccaaaggaagagcgagtgaacaaagaagataaagccaga
gataccaaggagaagactcccaagtccgataaagagaaggaaaaagccaagagagaagag
aaatcctccaaggatgaaaaatccaagataactgttaccaatgccgagtcaaagtcaaca
gcagaaaaggagagagagaaggaaccatccagagagagagatctaaccaaggatatgaaa
tccaaggaaaatattagaggaggtggaggaggaggaggaggaggaggaggagagaaggcg
cctgttgctgggtccttgaagtcacctgttccccgatcagaagcatcagattctgaaagg
gaacaaaaacgccgcaaagttgatacccattcttctccatcgcattcctcaactgtaaag
gacaacctcagcgaactcaaggactcttcagcaaagcactacattaaccactcagctcca
acactgtccaagagtaaagagagagaagtggaaaagaaagatttggacaagtcaagggaa
agatccagagagagagagaagaaagatgaaaaagagaggaaagatcgaaaaagggatcat
tcaaatagtgaccgagaggtgccccaggattccaccaaaaggcggaaagaggaaaatgga
acaactgtttcttccaagcatagcaagagtgaaagtccctctgattcccctcgctcaaat
gagaaggagaaggagaaaaacaaatcaaaatcttcaagcaaagaaaaaggagagtccatc
aaagtggaaaagatggagaaaagctcctctgctagcaaaaaggagtccagacatgataag
gagaaaacagagaaaaaagacaagcgggacagcactggaggcaaagaagaaaagaaacat
cataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system