KEGG   Eublepharis macularius (Leopard gecko): 129341052
Entry
129341052         CDS       T09084                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03013  Nucleocytoplasmic transport
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129341052 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    129341052 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:emc03019]
    129341052 (THOC2)
   03041 Spliceosome [BR:emc03041]
    129341052 (THOC2)
Messenger RNA biogenesis [BR:emc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129341052 (THOC2)
Spliceosome [BR:emc03041]
 Complex C
  Other components
   EJC/TREX
    129341052 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129341052 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 129341052
NCBI-ProteinID: XP_054851924
UniProt: A0AA97KAH5
LinkDB
Position
13:32069747..32136038
AA seq 1608 aa
MAAATVVAALPDEWIKNWEKSGKSEFLQLCRSLSENKSHDNVTFRGIQQALYELAYHVVR
GNLKHDQASNVLNDVIEFRDDMPSILADVFCVLDIETSCLEEKNKRDQFMQLVLACLYLV
SDTILKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAE
LGQDLSGNITSELILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYM
CEPQTLCHILGFKFKFYQEPNGETPVSLYRVAAVLLQHNLIDLEDLYVHLLPTDNTILEE
HKREIGEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEAMLKIGDW
QHAQSIMDQMPPFYATSHKPIAVALCQLLHVMIEPLYRRLGVPKGAKGTPIPPLQNKRAP
KQVENFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEYQSDGSKQEDKEKMEL
LFSCLLSITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLL
VKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVV
DSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELA
GLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQ
IRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLV
QFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEK
GNKQQQKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSS
YEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQSEHVQRVLQRLKL
EKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYD
RVFSDIIYTVASCTENEASRYGRFLCCMLDTITRWHSDRAIYEKECGNYPGFLTILRTTG
CDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVA
NLGTALERRVQKICQDEKEKRPDLYALAMGYSGQLKSRKHCMVPENDFHHKDPPTRNAVP
TTVQNGPGGAALPPLLTINAAKLEESTAEETDKLKEKSQGAVKVINKAASATPKVTASNG
NSAANSKVIKEKEEKEKCGKEKDKEKKEKTPAATPEAKSLGKDGKEKPKEERVNKEDKAR
DTKEKTPKSDKEKEKAKREEKSSKDEKSKITVTNAESKSTAEKEREKEPSRERDLTKDMK
SKENIRGGGGGGGGGGGEKAPVAGSLKSPVPRSEASDSEREQKRRKVDTHSSPSHSSTVK
DNLSELKDSSAKHYINHSAPTLSKSKEREVEKKDLDKSRERSREREKKDEKERKDRKRDH
SNSDREVPQDSTKRRKEENGTTVSSKHSKSESPSDSPRSNEKEKEKNKSKSSSKEKGESI
KVEKMEKSSSASKKESRHDKEKTEKKDKRDSTGGKEEKKHHKSSDKHR
NT seq 4827 nt   +upstreamnt  +downstreamnt
atggcggcggcgacggtggtggcggcgctccctgacgagtggataaagaactgggagaaa
tcgggcaagagcgagttcttgcagttatgtcgttctctctctgaaaacaaaagccatgat
aatgtgacttttagaggtattcagcaggctctgtatgagcttgcttaccatgttgtgaga
ggaaatctaaagcatgatcaagcatcaaatgttctcaatgatgtcatagaatttcgagat
gatatgccctccatcctagctgatgtattctgcgtattagatattgaaactagttgttta
gaagaaaaaaataagagagatcagttcatgcagctggtgttagcgtgtttgtatttagtt
tcagacactatactaaaagagcgtctggacccagaaacattagaatcattagggcttatc
aaacagtctcagcagttcaatcagaaatctgtgaaaatcaagacaaaacttttttataag
caacagaaattcaatttattaagagaagagaatgaaggttatgcaaagctcattgccgag
ctggggcaagatttatctggaaatatcactagtgagctgatcctagaaaatatcaaatct
ttaataggatgttttaacctggatcctaacagggtgttggatattatcttagaagtctat
gaatgtaggccagaatatgatgaattctttgtacctttgatagagtcctacatgtatatg
tgtgaaccacaaacactctgtcatatccttgggttcaaattcaagttttatcaggagcca
aatggggagactcctgtctctttatacagagttgctgcagttcttttgcaacataatcta
atagatttggaagatctttatgttcaccttcttccaacagataatactatccttgaagaa
cacaaacgagaaattggagaagccaaacaaattgtgaggaaacttacaatggttgtattg
tcttctgaaaagactgaggagaaggagaaagaaaaggagaaggaagaggagaagacagaa
aagccacctgataaccagaaactgggtttattagaagctatgttaaaaatcggtgattgg
cagcatgcccagagcattatggatcagatgcctccattttatgcgacttcacacaagcct
attgctgttgctctttgtcagcttcttcatgtgatgattgagcccctctataggagactt
ggagtgccaaaaggtgctaaagggacacctattcctcctttgcaaaacaagagagcacca
aagcaagtagaaaactttgaagatttaagaaaggaagtattcaacatgctttgttacctt
ggacctcatctctcccatgatcctattttatttgcaaaggtggtgcgtcttggcaaagct
tttatgaaagagtaccaatctgatggaagcaagcaagaggataaggagaaaatggaatta
ttattcagttgtttgctgagtattacagatcaggtcttgctcccttctcttaccttgatg
gactgtaatgcatgcatgtcagaagaactctgggggatgtttaaaacatttccataccag
caccggtaccgtctctatggccagtggaagaatgaaacgtataatagccacccactgcta
gtgaaagttaaagctcagacaattgacagagccaaatatattatgaagcgtctaaccaag
gaaaatgtgaagccttctggaagacaaattgggaaattgagccacagcaatccaacaatt
ttatttgattatattttgtctcagatacagaagtatgataacctaataacgccagttgtt
gattcattgaaatacctcacttcgctgaattatgatgtcttggcatattgcattattgaa
gcattggctaatcctgaaaaggagaggatgaaacacgatgacactacaatttccagctgg
ctacaaagtttagctagtttctgtggtgctgtttttcgaaaataccctattgaactggct
ggtctactccagtatgtggcaaatcagttaaaggctggaaaaagttttgacctacttatt
ttgaaagaggtagtacaaaaaatggctggcatagaaatcacagaagaaatgaccatggag
cagctagaagccatgacggggggagaacaactcaaagcagagggtggctattttggccaa
atcagaaacactaagaaatcttctcagagattaaaagatgcacttttggatcatgatctt
gcccttccactgtgccttctcatggctcagcagcgaaatggtgtgatctttcaagaagga
ggagagaaacatttgaaacttgtgggaaaattgtacgatcagtgtcatgacactctggta
caatttggtgggtttttagcatccaacttaagcacagaggattatattaagcgagtgcct
tctattgatgttctgtgtaatgagttccatacccctcatgatgctgcatttttcctttcg
aggcctatgtatgcacaccatatttcatcaaaatacgatgaactgaaaaaagctgagaag
gggaacaaacagcaacaaaaagttcacaaatacattacatcatgcgaacttgtgatggct
cctgttcacgatgcggtgatctccttgcaccttcccaaggtttgggatgacatcagccca
cagttctatgctacgttctggtcactgacaatgtacgacctcgctgtgcctcacagtagc
tatgagagggaagtcaacaaactcaaagtccagatgaaagcaatcgatgacaatcaggaa
atgcctccaaataaaaagaaaaaagaaaaagagcgctgtacggcccttcaggataagctt
cttgaagaagagaagaaacaatctgagcatgtgcaaagggtgctgcaaaggttgaagctg
gaaaaagataattggcttcttgcaaagtctaccaaaaatgagaccataacgaaatttcta
caactgtgtatatttcctcgctgcattttctctgccattgatgctgtctactgtgcccgc
tttgtagaactggtgcatcaacagaaaacgccaaatttttccacacttctttgctatgac
agagtattctcagatataatctatacagtagcaagctgtactgaaaatgaagctagtcgc
tatggcaggtttctttgctgtatgctggatactataacacggtggcatagtgatagagct
atatatgaaaaggaatgtggtaactatccaggcttcctcactatattacgaacaactggt
tgtgatggtgggaacaaagctgaccagttagattatgaaaattttcgacatgtggtacac
aagtggcattataagttaaccaaggcgtctgttcactgcctcgaaacgggtgaatataca
catatcagaaatatcctgattgtgctgaccaaaatcttgccatggtatcccaaagttgca
aacctaggcacggcattggaaagaagggtccagaaaatttgtcaagatgagaaagagaag
agacctgatctctatgcattagctatgggctactctggacagttgaaaagtagaaaacat
tgtatggtccccgaaaatgatttccaccataaagacccacccaccaggaatgcagtacct
actacagtgcaaaacgggccaggtggagctgcgctgcctcctttgctgacaataaatgca
gctaaactggaagaaagcactgctgaggagactgataaattaaaggagaaatctcagggt
gctgtaaaagtaattaataaagctgccagtgcaacaccaaaggtgactgcaagcaatggg
aacagtgctgctaacagcaaagttattaaagaaaaagaagaaaaagagaaatgtgggaag
gaaaaagacaaggagaaaaaagagaagactcctgctgccactcctgaggccaaatctctt
ggaaaggatgggaaagagaaaccaaaggaagagcgagtgaacaaagaagataaagccaga
gataccaaggagaagactcccaagtccgataaagagaaggaaaaagccaagagagaagag
aaatcctccaaggatgaaaaatccaagataactgttaccaatgccgagtcaaagtcaaca
gcagaaaaggagagagagaaggaaccatccagagagagagatctaaccaaggatatgaaa
tccaaggaaaatattagaggaggtggaggaggaggaggaggaggaggaggagagaaggcg
cctgttgctgggtccttgaagtcacctgttccccgatcagaagcatcagattctgaaagg
gaacaaaaacgccgcaaagttgatacccattcttctccatcgcattcctcaactgtaaag
gacaacctcagcgaactcaaggactcttcagcaaagcactacattaaccactcagctcca
acactgtccaagagtaaagagagagaagtggaaaagaaagatttggacaagtcaagggaa
agatccagagagagagagaagaaagatgaaaaagagaggaaagatcgaaaaagggatcat
tcaaatagtgaccgagaggtgccccaggattccaccaaaaggcggaaagaggaaaatgga
acaactgtttcttccaagcatagcaagagtgaaagtccctctgattcccctcgctcaaat
gagaaggagaaggagaaaaacaaatcaaaatcttcaagcaaagaaaaaggagagtccatc
aaagtggaaaagatggagaaaagctcctctgctagcaaaaaggagtccagacatgataag
gagaaaacagagaaaaaagacaagcgggacagcactggaggcaaagaagaaaagaaacat
cataaatcttcagacaagcacagataa

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