Eublepharis macularius (Leopard gecko): 129341394
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Entry
129341394 CDS
T09084
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129341394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129341394
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129341394
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
129341394
NCBI-ProteinID:
XP_054852543
UniProt:
A0AA97LE33
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Position
13:complement(7680465..7742013)
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AA seq
546 aa
AA seq
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MATELEPAGPGGALLEADEDEEQWLYGDDSGKQEDGPISGHSESHLLHDVPQENRIVNCE
DRELLQQVLPSGEDDEEDSESDSDDDDIRVTIGNIKTGAPSYMGTPMNLNLKTGRGYGAS
ASAKLQPKGIDLEAAGNINGLPVIEVDLESFEDKPWRKPGADLSDYFNYGFNEETWKAYC
EKQRRLQLGLEPSAPISAENKITVQQGRTGNAEKEPENNIVKMDFKTDFVALVGGRIKAG
PPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHVNKSQPPQQPQQPSQ
PQQPPQQQPFAPPAGPPPPIGGPPPPHFLHPPPPPVTSVPPPLHPPGLPPPGPIPGLFPP
PLAPPPALLIPTLDGQPASYNNRQPPPFGYSSTDSGFISYPPISTSHTPWVTTVDKASSA
SDSGHWEYSGSRRERERDRARTPTASEYNNDDERYRYYSRERSYDFERDYRRSRDRSRER
EDRHRERRHRDKEEGSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGVPEGN
EQDSKE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgagctggagcccgccgggcccggaggcgcgctgctggaggcggacgaggac
gaggagcagtggctctacggagatgacagtggtaagcaagaagatggaccgatttctgga
cactcagaatctcatcttttacacgatgttccccaggagaacaggattgtcaactgtgaa
gatcgagagttgttgcaacaggttcttcctagtggcgaggatgatgaggaagacagtgag
agcgacagtgatgatgatgacatcagagtcaccattggcaacatcaaaacgggagcacct
tcgtacatgggaacaccgatgaatctgaatctaaaaacaggtcgaggctatggagcatcc
gcttcagccaagctgcagcccaaaggtattgatttagaggctgcagggaatataaacgga
ttgcctgtaatagaagtggatttagaatcgtttgaagacaaaccgtggaggaaaccaggt
gctgacctttctgactatttcaactatgggttcaatgaagaaacatggaaggcctactgt
gagaagcagcgtcgccttcagctgggcttggagccctcagcccccatcagtgctgagaat
aagatcacagttcagcaaggaagaacaggaaatgcagagaaagaaccagagaataatatt
gtcaaaatggatttcaaaacagattttgtagccctggttggcgggcggataaaagctggg
cctcccccaaacaggaagctggggggaaccatcgatgtgattggtggacaggcaggcacc
atcagaagggtagaaggaaggcgtcgagataagcatgcctctgaggagaaccccattcag
gttcttggggatcatgtgaacaaatcgcaaccccctcagcagccgcagcaaccgtcacaa
ccacagcagcctcctcagcaacagccgtttgcaccgcccgcgggtcctccaccgcccatt
ggtggcccacctccaccccactttctccatccgccaccaccaccggtgacttccgtccca
ccccctctccatcctccaggtcttccgccaccaggtcccattccagggttgttccctccg
cctctcgctccaccaccagccctcctcatcccgacactagatggccagcctgccagctac
aacaaccgacagccgcctccgtttggttacagctccacagattcaggcttcatcagctac
ccgcccatttccacatctcacacaccctgggtgaccacagtggacaaggcctcaagtgct
tctgacagtggtcactgggaatactctggctcaaggagagagagggaaagagatcgtgcc
cggactcccactgccagcgaatacaacaatgatgatgagaggtatcgttactatagccga
gagcgcagttatgattttgagcgggactaccgcaggagcagagatcgcagtcgagaacga
gaggatcgccatcgggaacgaaggcacagagacaaagaagaaggcagcaaacacaaatca
tcccggcggaagcagcatgagagtgaggaaggggaaagccatcggcgccacaagcacaaa
aagaacaagcgcagcaaggaagagaaagaggcgagtgaagatggggtcccagaggggaat
gagcaagactccaaggagtag
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