Eublepharis macularius (Leopard gecko): 129341491
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Entry
129341491 CDS
T09084
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03030
DNA replication
emc03410
Base excision repair
emc03420
Nucleotide excision repair
emc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129341491 (RFC5)
03410 Base excision repair
129341491 (RFC5)
03420 Nucleotide excision repair
129341491 (RFC5)
03430 Mismatch repair
129341491 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emc03032
]
129341491 (RFC5)
03036 Chromosome and associated proteins [BR:
emc03036
]
129341491 (RFC5)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129341491 (RFC5)
DNA replication proteins [BR:
emc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129341491 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
129341491 (RFC5)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129341491 (RFC5)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129341491 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
129341491 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_lid_RFC1
AAA_24
DEAD
AAA_14
RuvB_N
nSTAND_NTPase5
ResIII
DUF815
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
AAA_7
TniB
DNAX_ATPase_lid
nSTAND3
TIP49
Mg_chelatase
Thioredoxin_6
NPHP3_N
bpMoxR
AAA_3
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
129341491
NCBI-ProteinID:
XP_054852682
UniProt:
A0AA97KA26
LinkDB
All DBs
Position
13:55976286..55996462
Genome browser
AA seq
337 aa
AA seq
DB search
MAAERAAASGRTVAANLPWVEKYRPQTLGDLISHQDILSTIQKFISEDRLPHLLLYGPPG
TGKTSTILACAKQLYKEKEFGSMVLELNASDDRGIDIVRGPILNFASTRTIFKKGFKLVI
LDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKVIPALQSRCTRFRFGPLTPELMV
PRLQHVVEEEKVDISEDGMKALVTLSNGDMRRALNILQSTNMAFGKVTEETVYTCTGQPL
KSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSIRIQLLI
KMADIEHRLAAGTSEKIQLGALVAAFQVTRDLIVAEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagcgcgcggctgcttcggggaggacggtggccgcgaacttgccctgggta
gaaaaataccgacctcagacgctgggtgatctgatttctcatcaggatattctgagtacc
attcagaagttcattagtgaagatcgattgcctcatcttctcctctatggacctccaggg
actggcaagacctccaccattttggcctgcgcgaaacagctttacaaagagaaggagttt
gggtcgatggttctagagttgaatgcttcagacgaccggggcattgatattgtcagaggg
cctatcctgaactttgccagtacgaggacaatatttaagaagggctttaagctggtgatt
ttggatgaagccgatgccatgacacaggatgcccagaatgccctccgtcgtgtgattgaa
aaattcacagagaacacccgattttgcctgatctgcaactacctctccaaggtcatccca
gctttgcagtctaggtgcacccgattccgcttcgggcctctgacaccagagcttatggtt
ccccgcctgcagcatgttgtagaggaggaaaaagttgacataagcgaagatgggatgaag
gctctggtgacgctgtctaacggcgatatgcgcagggctctgaacatcttacagagtact
aacatggcctttgggaaggtgacggaggagaccgtctacacctgcacagggcagccactc
aagtctgacattgccaacatcttggactggatgctgaaccaagatttcaccactgcctat
cgcaacatcatggaactgaaaaccctgaagggcctggctcttcatgacatcctgacggag
atccatttgttcgtccaccgagttgactttccatcatctatacgaatccagttattgatc
aagatggcagatattgagcatcgtctggctgcaggaacaagcgagaagatccagctggga
gccctcgttgctgccttccaagtcaccagagatctgattgttgccgaggcctag
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