Eublepharis macularius (Leopard gecko): 129341540
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Entry
129341540 CDS
T09084
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129341540 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emc01009
]
129341540 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emc04515
]
129341540 (PCDH11X)
Protein phosphatases and associated proteins [BR:
emc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129341540 (PCDH11X)
Cell adhesion molecules [BR:
emc04515
]
Cadherins
Protocadherins
129341540 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
TMEM154
Big_9
DUF6249
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
129341540
NCBI-ProteinID:
XP_054852766
UniProt:
A0AA97LF11
LinkDB
All DBs
Position
13:complement(28602171..29474093)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPIGTSVSQLHATDADLGSNAQI
HFYFSSQISSLAKRLFAIDNATGLISIKEPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGKDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYDLVPMSTSPGSVVTKVFAIDND
TGMNAELRYSIIGGNSRGLFMIDQLTGNVTLKEKVISSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNGSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGS
IHTRQNSKEVGRPQSPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSTA
STSHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPSFNFQQGWGRGAIPEGRHTLGRPIPKDDTDKGQGGPRP
QFYNTCERHCTSEDPVKVIPLANFIPAQVTAMPGSNSTLIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttccgggacttacctcttggcagtcttgttagcctgcatcgtgtttcag
tctggtgcacaggagaagaattacacagtccgggaagagctgccagaaaatgtcctaatt
ggcaatttgcttaaggacctcaatctgaccctggaccctgatgtgcccctttcgtcgcct
cttcagttcaagcttgtatacaagactggggacgttccgctggtccgtgtggaggagaat
accggagaaatattcaccactgccaaccgcattgatcgggaaaagctttgctctggcatt
tttagtgagaatcgttgcttttatgaggtggaagttgctgtcctgcctgatgaagtcttc
aggctggtcaagatcaggttcctgattgaggatataaatgacaacgctcctcttttccca
tccacggtcattaatatctccatccctgagaacacagccatcaattcccgttactcagtc
ccatcagcaatcgatcctgacattggagtgaatggcattcagcactatgaactccttaag
cccaaaacagctccgaaaaggacctttggatccattacaaatgaacagggtcaaaatgtt
tttggacttgatattattgagacacctgagggagacaagtggccccagctgatagtccag
cagattcttgacagggagcagaaagacacctatgtgatgaagattaaagtggaagatggt
ggaaacccgccaaggtctagcactgccattctccaagtaacagtcaccgatgtaaatgat
aaccgcccagtgttcaaggagaatgatattgaagtcagcgttcctgagaatgcccccata
ggtacatctgtttctcagctccatgccactgatgctgatctgggatcaaatgcccagatc
cacttctatttcagcagccagatctccagtttggccaaaagactttttgccattgacaat
gccactggtcttatcagtatcaaggagcccctggatcgggaggaatccccagtacacaag
ttaacagtcctggcaagtgatggcagttcaacaccctcgagagcaacagtgacagtgaat
gtcactgacattaatgataatatcccatcaatagacaccaggtacattatcaatcctgtg
aatgggactgtgcttttgtccgagaaagctccactcaatactaaaattgccctgattacg
gtaatggataaggatgctgacctcaatgggaaagttacctgtttcacagaccatgatgta
ccattcaggttaaagcctgtgttcgataatcagtttctgctggagacagccacgttccta
gactacgaggccacaagggaatatgctattaaaatagtggcttctgattcagggaaacca
cccctgaaccagtctgcaatgctcctcatcaaaattaaggatgaaaatgacaatgcccca
gtgttcacacaacccattattggactctctatccctgagaacaacgctcctggaacccag
ctgaccaagataagtgctactgatgcagacagtggacgcaatgcagagataagttacatg
ttgggcttggacgcacctcccattttcaacctggaccgccgtactggcattctgactgca
gtgagaaaactggatagggaaaaacaggacaggtattcattcactgtgctggctaaagat
aatggcatgccacctttgcagaccaatgccactgtgacagtttcagtcttggaccaaaat
gacaacagccctgctttcacacacaatgagtataatttctatgtaccagaaaacctaccc
atgtatggcacagttgggctcatcactgtgacagatgcagactcgggggagaatgcagca
gtgaccttgtctatattaaatggcaaagataatttcattattgatcccctcactggagtc
ataagacccaatattacctttgacagagagcagcaagggtcttacacttttcaggtgaag
gctgtggatggaggaaggttacaacgttcgtcaactgccaaagttaccatcaatgtcgtt
gatgttaatgacaacagacctgtgtttgtcatcccttcatctaactactcgtatgattta
gttccaatgtccactagcccaggctctgtagtgactaaagtgtttgccattgacaatgat
acggggatgaatgcggagcttcgatatagcattataggtgggaactcaaggggcttgttt
atgatcgatcagttaacaggcaatgttactttgaaagagaaagtcatttcatcagatcat
ggtttgcacaggctggttatcaaagtcaatgatttaggacagcccgagtctctgtacact
atagccttggtgcatttattcgtgaatgaaactgtcaccaatggatcttacgtccaagaa
ttagtacgcagaaatatggaaacaccagttggccaaaacgttggggatggtgagataacc
ccacagaccaatgattatgtcaagatcatcattgctatcattgcaggtaccatgacggta
atcctagtcatttttgtgactgctctggtacgatgccgtcaaacaccccggcacaaggta
gtccagaaaagcaagcagagtggcgagtgggtgtctccaaatcaggaaaaccgtcagatc
aagaaaaagaagaagaagaagaaacgctcgcccaaaagtcttcttcttaactttgtaaca
atcgaagaatctaagcctgatgatcctggccatgagcacatcaatggcactttggacatt
cctgtagagttagaagaacagactatgggaaaatacaactgggccaccacaccaacaacc
tttaagcctgacagcccagatttagcaaagcactacaagtctgcctcaccgcagcccacc
ttccaaattaaacctgagactccagtgcccccgaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtggtgggctgtgattcactctctaagtgctcctccagtagc
tcggacccttacagtgtctccgaatgcagctgtcagggaggattcaagactccaggctct
atccacaccagacagaattcaaaagaagtgggaagaccacagtctccattaaaagaaaca
agtctagaatcatggactcagccacagtcacagcgccgagtcacgtttcatctaccagac
ggctctcaggaaagctgcagtgacagtgggctaggagaccacgagcccagcagcaccgca
agtacatcacatcctttaccgcttggcttcccacaagaggagtactatgaacagacatcg
cctaacagtcggacagaaggagatggaaattcagacccagagtccaccattgaggtgaac
ctccagaaagctctagccgaagcctctgaaacctgcacacaggaatgcctcatcctcggc
cattccgacaattgctggatgcctccttccttgacacagtaccaacaatccaaccctcct
ttgccatccttcaatttccagcagggatggggaagaggagccataccagagggaagacac
acccttggaaggcccattcctaaagatgatactgacaaaggccaaggaggaccgaggcct
cagttctacaatacctgcgaaagacactgcaccagcgaagacccagtcaaagttattcct
cttgcaaacttcattcccgcccaggtgacagccatgcctgggagtaactccactttaatc
catgagcaccagctataa
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