Eublepharis macularius (Leopard gecko): 129341554
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Entry
129341554 CDS
T09084
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emc03009
]
129341554 (DDX55)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129341554 (DDX55)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
Pre-60S particles
Helicases
129341554 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
SHOCT
AAA_22
YbjM
Motif
Other DBs
NCBI-GeneID:
129341554
NCBI-ProteinID:
XP_054852789
UniProt:
A0AA97KD70
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Position
13:complement(68571333..68582265)
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AA seq
593 aa
AA seq
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MEPVAEDSWESLPVQLSPGVLRALQELRFSQMTPVQSATIPLFMTNKDVAAEAVTGSGKT
LAFVIPIIEILLRREEKLKKMQVGAIIITPTRELAMQINEVISHFTKYFPQFSQCLLIGG
KNPMEDIEKFKECGGNIVVATPGRLVDMFRRQSDGLDLARSVKSLDVLVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVLASNAQKTPT
RLQNYYMICKADEKFNQLVHFLRLHKAEKHLVFFSTCACVEYYGKALESLIKNAKIMCIH
GKMKHKRNRIFTEFRMLPSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHMGSALVFLLPMEEAYVSFLSINQKCPMQEMQLQSNVGDVLPKLKSLSLADRAMYEK
GMRAFVSCVQAYAKHECSLIFRIKDLDFASLARGFALLKMPRMPELKGKTFPDFEPVDID
TDSIVFKDKNREKQRQKLLAEPRKGRQEQEGRRKGPRNQAWSKQKAKKEKRRKLRAKRQR
EEGSDVEDKDMEELLNDTRLLKRLKKGKISEEEFEKKLLQSEKAAQADSESEG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagccggtggccgaggactcgtgggagtccctgccggtccagttgagcccgggcgtc
ctgcgagccttgcaggagctgcgcttttcccagatgacgccggtacagtctgcaacgatt
cctttgtttatgacaaataaggatgttgctgctgaagcagtaaccggcagtgggaaaacg
ttagcttttgttattcctattatagaaattcttctccgacgggaagaaaagctcaagaaa
atgcaggtgggtgcaattatcatcactcccacgagagaactcgcgatgcagataaatgag
gtgatctcccacttcacaaagtattttccacagtttagccagtgccttttaattggtggg
aagaatcccatggaagatatcgaaaaattcaaagaatgtggcggaaacatcgttgtagcc
acgcctgggcgtttggtggacatgttccgaaggcaatcagatggactggatttggccaga
tccgtgaaatcccttgatgtgctggtcttagatgaagcagatcggcttctggatatgggc
tttgaagccagtttaaataccattctggactttttgcccaagcagagacggactggcctc
ttctcagcaacacaaacccaagaagtggagaacctggtgagggcgggcctccggaacccg
gtccgtatctcggtgaaggagaagggagtgttggcaagcaatgcccagaagaccccaacg
aggcttcagaactattacatgatctgcaaagcagatgagaaatttaaccagctcgtccat
ttccttcgtctccacaaggcagaaaaacaccttgtctttttcagtacttgtgcttgcgtg
gagtattatgggaaggctttggaatctttgattaaaaatgcgaaaataatgtgcatccat
gggaaaatgaaacacaagcggaacaggatattcacagaattccggatgctcccaagtggc
attctggtgtgtaccgatgtgatggcccgtggcatagacattccagaagtgaactgggtt
ttgcagtacgatcctccaagcaatgcaagcgcttttgtgcatcgctgcggccgcaccgca
cgcattggccacatgggcagtgcacttgtatttttgcttcccatggaagaagcatacgtc
agtttcctgtcaattaaccaaaagtgtcccatgcaggaaatgcaactgcagagtaacgtg
ggagatgttctgcctaaactgaaatctctcagtttggctgacagagctatgtacgagaaa
gggatgagggcgtttgtatcatgcgtgcaggcctatgccaaacatgaatgcagtctcatc
ttccggatcaaagatctagacttcgccagcctggcccgaggttttgccttgctgaagatg
ccaaggatgccggagttgaaaggcaagactttcccggactttgagcccgttgatatcgac
acggactcgattgtgttcaaagacaagaaccgagagaagcaaaggcagaagctgctcgct
gagccgaggaaggggaggcaggagcaggaagggaggaggaaaggacccaggaaccaggcc
tggtccaagcagaaagcgaaaaaggaaaagaggaggaaactgagagccaagcggcaaaga
gaagagggctctgatgtggaagacaaggacatggaggagctcttgaacgacacccgcctc
ctgaagaggctcaagaagggcaaaattagtgaggaagagttcgagaagaaactgctgcag
agtgagaaggcggctcaggctgactcagagtctgaaggatga
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