Eublepharis macularius (Leopard gecko): 129341653
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Entry
129341653 CDS
T09084
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emc04515
]
129341653 (PCDH19)
Cell adhesion molecules [BR:
emc04515
]
Cadherins
Protocadherins
129341653 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
129341653
NCBI-ProteinID:
XP_054852918
UniProt:
A0AA97LEF5
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Position
13:24206527..24363562
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AA seq
1099 aa
AA seq
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MDILCPLLRFLFALLWTGAGALINLKYSVEEEQRAGTVIANIAKDARDAGFVLDPRQPTA
FRVVSNSAPHLVDINPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIK
DLNDNAPSFPTDQIALEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKT
RGDGSRFAELVVEKSLDRETQSHYSYMITALDGGDPPNFGTVELNIRVIDSNDNNPLFED
PSYTVSVPENAPPGTPVIRLNATDPDEGTNGQVLYSIHSYVSEKARDLFQINPQTGLITV
SGAIDYEEGHAYELDVQAKDLGPNSIPAHCKVTVTVQDANDNPPLINLLSVNSELVEVSE
NAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYN
LTIQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKSFEFKVLAKDGGN
PSLQSNATIRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGEN
GRLSYEMAEGDRGFFEIDQVNGEIRTTRSFGENSKTTYELIVVAHDHGKTSLSASALILI
YLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEY
SYGHQKKSNKKKKICKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNHRNTGSNHVYHHTFTGQSNQQPDLIINGMPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVTSMGSQMP
EQDQSEGFHCREECRILGHSDRCWMPRNPVPSRAKSPEHGRNVMSLSIEASTVDTELYED
CSTKRTFATFGKDGSEPVPEERGPVNLKGKRTVDPPICSPKVNGAVREAGNGCEAVSPVT
SPVHLKSPLSSKPSVSYNIMHCPANRDLEPFVNNGPSRPMEAEPRGADSENIMHEINPLL
QECREKDSPGVKRLKDIVL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggatattctgtgccccctgcttcggtttctgttcgctctcttgtggactggggcaggt
gccctgatcaacctcaagtactcagtggaggaggaacagagagctggcacagtgattgcc
aacatagccaaagatgcacgagacgcgggctttgtactggatccccggcagcccactgct
tttcgagtggtctccaattcggcaccacacctggtggacatcaacccaggctcagggtta
ctggtgaccaagcagaagattgaccgggacttactctgcagacagagccccaagtgtgtg
atctcgttggaggtcatgtcgagttccatggagatctgtgtgatcaagctggaaatcaaa
gacctcaatgacaatgcacccagtttccccacggatcagattgcactggagatctccgag
acggctagcccaggcaccagggtaccgctggagagtgcctacgatccagactcgggcagc
tttggggtgcagagttatgagatcacacccaacgacctctttgggctggagaccaagacg
cgtggggatggctcgcgctttgccgaactggtggtggagaagagtctggatcgtgagacg
cagtctcattacagttacatgatcactgctttggatggtggtgacccacccaactttggc
actgtggagttgaacatcagggtcatagactccaatgacaacaaccctctctttgaagac
ccatcctacaccgttagtgtgcctgagaatgcaccccctggcactccagttatccgcctc
aacgccactgaccccgatgagggcaccaatggacaagtgctgtattccatccacagctat
gtgtctgagaaggccagggacctcttccagatcaatcctcagacaggcctgatcacggtc
agtggcgcgattgactatgaggaagggcacgcctatgaactggatgtgcaggccaaagac
cttggtccaaattccattcctgcccactgcaaggtgaccgtcactgtgcaggatgccaat
gacaacccccctctcattaatttgctctcggtcaacagtgagttggtggaagtcagcgaa
aatgcaccgccaggctatgtgatcgctctggtgagggtctctgaccgggactctggtgcc
aatggcagggtgcagtgcaagctcctgggcaacgtgcccttccgtctgcaagagtatgag
agcttttccaccatcctggtggatggacgattggacagggagcaacgggaccagtacaac
ctcaccatccaggccaaggacaacggggtcccctctttgcaagccaccaagtccttcacg
gtcaagatcacagacgagaatgataaccaccctcacttctctaaaccttattaccaggtc
attgtgcaggagaacaacactcccggggcctacctcctttctgtttctgccagggaccct
gacctaggccttaacggcagtgtctcttatcagattgtgccctcccaagtaagagacatg
ccggtctttacttatgtctccatcaaccccaactcaggagacatctatgccttgaggtcc
ttcaaccatgaacagaccaagtcttttgagttcaaggtcttagccaaagatggaggcaac
ccgtccttgcaaagcaatgccaccatccgagtgattgtcttggatgtcaatgacaatacc
ccggtgatcaccgcccctcctctggtcaatgggactgcagaagtatatattcccaggaac
gctggggttggctatttggtgacagtggtcaaggcagacgactatgatgaaggggagaat
ggaaggctgtcctacgagatggcagaaggagaccgaggatttttcgagatcgaccaggtc
aatggcgagataaggaccaccagatcatttggggagaattccaagactacgtatgagctg
attgtggttgcccacgaccatgggaaaacttctctttcggcttctgccttgattttgata
tacctttctccggctctggatgcccaggaatccataggatctgttaacttatccctgatt
tttattattgccctggggtctattgctgccattctctttgtcaccatgatctttgtagca
gtaaagtgtaaacgggataacaaagagatcaggacgtacaattgcagaattgcagagtat
tcctatgggcaccaaaagaaatccaacaagaagaaaaaaatctgcaagaatgacatccgc
ctggtgccacgggatgtcgaggagaccgataaaatgaacgttgtgagttgctcctccctc
acttcgtcgctcaactactttgactatcatcagcagaccctgcctctgggctgccgcaga
tctgaaagcaccttcctcaatgtggagaaccagaaccacaggaacacggggtccaaccat
gtctatcatcacaccttcactggacagagcaaccagcaaccggatctcatcatcaacgga
atgccgcttccagagactgaaaactactcctttgattccaactacgtgaacagcagagcc
catttaataaaaagcagttcaacattcaaggatttggaggggaacagcctgaaagacagt
gggcatgaagagagtgaccagacagacagcgaacacgatgttcaacgtggcctgtactgt
gacacagctgtgaatgacgttttaaacactagcgtcacttccatggggtctcaaatgcct
gaacaagatcagagtgaaggatttcattgcagagaagaatgccggatccttggccattct
gaccgatgctggatgccccggaaccctgttcccagccgagcaaaatcccccgagcacgga
aggaatgtcatgtccctctctatagaagctagcactgtggatacagagctttacgaagac
tgtagcacaaagagaacttttgcgacatttggcaaagacggcagtgagcccgtccctgag
gaacggggcccagtcaacctgaaaggcaaaagaacagtggatcctcccatctgcagccca
aaggtcaatggtgcagtccgagaggcagggaacggctgtgaagctgtcagccctgtcaca
tcacccgtccatctgaagagtcccttgtctagcaaaccatcagtgtcctacaacataatg
cactgcccagcaaatcgtgacctggagccgtttgtaaacaatggcccttctcggcccatg
gaggcagagccgaggggcgcagacagtgaaaatataatgcatgaaattaaccctcttctg
caagaatgtagagagaaagactcacctggagtgaagaggctaaaagacatagtactctga
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