Eublepharis macularius (Leopard gecko): 129341705
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Entry
129341705 CDS
T09084
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129341705 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129341705 (THOC5)
03041 Spliceosome [BR:
emc03041
]
129341705 (THOC5)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129341705 (THOC5)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129341705 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
129341705
NCBI-ProteinID:
XP_054853008
UniProt:
A0AA97LEN2
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All DBs
Position
13:complement(50769763..50802353)
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AA seq
729 aa
AA seq
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MSSDSSKKRKPKVIRTDGGPQEGKRSRTDVDQDAKYYSEEAEVDLRDPNKDYELYKQTCQ
DLQKLMAEIQELKSKGNKDCAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYKEAPAEISRMEITR
GDPHQQTLSRLDWELEQRKRLAEKYKECLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLAMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLAVAIEGNVEEAKAL
CKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDGSVL
LLTFYYLMNLNVMTVKAKVTAAAEMTMPISAGDLLSPDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILTLNDYVMELGHPYVWVQKLGGLHFPKDQPQQPVIADSSLSASHMERTMKLLK
MRLESRLALHKQFASLEHGILPVSSECQHLFPAKIVSRLVKWIALTYEDYLELSYTKDVV
EAGLAEDTHLYYMALIERGTGKVEETYYSKPPFPQMVAQPVIVGDEAPSEQALMCSRLFS
PSQFSKSKLQAAVVLNPGYSFVPPVFSLCLNWKGEKTNSNDDNIRSMESEVNVYYKELCG
PKPGYQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLRLVRGPSRMKPFKFN
YPQGFFSHR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactccagcaagaaacggaagcccaaggttattcgcacggatggaggacca
caggagggcaagagaagcaggacagatgttgatcaggatgccaaatactacagtgaggag
gcagaagtggatctgcgagaccccaataaagactatgaactttataagcagacatgccag
gaccttcagaagcttatggcagagatccaggagctgaaaagcaaaggcaacaaagactgc
gctgctgagatagaggaacgtcgcatccagagctgtgtgcacttcatgaccctgaagaaa
ctcaaccgtttagctcacattcgcttaaagaaggggagggaccagactcacgaggccaaa
cagaaagtggacgcttatcacctgcagcttcagaacctgctgtatgaagtcatgcacctg
caaaaggagatcacgaaatgcctggagttcaaatccaagcatgaagaaattgagctggtg
agtgtggaggagttttacaaagaagcccctgcagaaatcagtaggatggagatcacaaga
ggagatcctcaccagcaaactctctcccgtcttgattgggagctggagcagcgcaaacgg
ttggcggagaaatataaagaatgtctagccaacaaagagaagattctgaaagagatagaa
gtgaagaaggaatatctgagcaatcttcagccccgcctcaatagcattatgcaggcttct
ctccctgtccaagagtacctcgcaatgcctttcgaccaggtgcacaagcagtatgagaca
gccagacacctcccaccgcctctctacgttctctttgtccaagctagtgcctatggccag
gcctgtgataagaagctggctgttgctatagaaggaaatgtggaggaagctaaagctctc
tgcaaacccccagaggactcgcaagatgatgagagtgattcagatgcagaggaggagcaa
actacgaaacgccgtcgcccgacactgggagtgcagctggatgacaagcgcaaggaaatg
ctcaagaggcatcctctgtcggtcaccattgacctgaaatgcaaagatggcagcgtgctc
ctcttgaccttctactatttgatgaacctcaatgtcatgacagttaaagcaaaggtgact
gcggctgctgagatgaccatgccaatcagtgctggagacctgctgtcccctgattccctt
ttgagctgcttgtatccaggtgatcatgggaagagaactccaaatcctgccaaccaattc
cagtttgataaagttggtatcctgaccctgaatgattatgtgatggagctgggccaccct
tatgtgtgggtgcagaagttggggggccttcatttccccaaggatcagccccagcaaccc
gtgatagccgatagctctctgagtgccagccacatggagaggaccatgaagttgctcaag
atgaggctggagtctcgcctggctctgcacaagcaatttgcttcccttgagcatgggatt
ctgcctgtttccagtgaatgccagcacctctttcctgcaaagatcgtgtcacgtttggtg
aagtggattgccctcacatatgaggactacctggagctgtcctacaccaaagatgttgtg
gaggctggtttggctgaggacactcacctgtattacatggcattaatcgaaagagggaca
ggcaaagtggaagaaacttactactcaaagccccccttcccccaaatggtagcacagcct
gtaattgtaggagatgaggctccttctgaacaggccttgatgtgttcaagactcttctcc
ccgtcccagttctcaaaatccaaactccaagccgctgtggtgctgaacccagggtactct
tttgtgccgcctgtctttagcctgtgcctgaactggaagggagagaagaccaacagcaat
gatgacaacatccggtccatggagagtgaggtcaatgtatattacaaggagctgtgtggc
cccaagccaggctaccagctcctgaccaaccagctgcaacgcttgtgtgtcgtcctggat
gtctacctagagacggaaacccacgacaacagtgtggaggggcccaaggagtttccacag
gagaagatgtgtctgcgcctagtcagggggcccagccggatgaaacctttcaagttcaac
tatcctcaggggttcttcagccatcgttga
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