Eublepharis macularius (Leopard gecko): 129341707
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Entry
129341707 CDS
T09084
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03082
ATP-dependent chromatin remodeling
emc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129341707 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129341707 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emc01009
]
129341707 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129341707 (SMARCB1)
03036 Chromosome and associated proteins [BR:
emc03036
]
129341707 (SMARCB1)
Protein phosphatases and associated proteins [BR:
emc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129341707 (SMARCB1)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129341707 (SMARCB1)
SWI/SNF complex
129341707 (SMARCB1)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129341707 (SMARCB1)
PBAF complex
129341707 (SMARCB1)
SWI/SNF complex
129341707 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
129341707
NCBI-ProteinID:
XP_054853013
UniProt:
A0AA97KA52
LinkDB
All DBs
Position
13:45953038..45961915
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFFMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHESQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgttgagtaaaaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgagttcttcatgatcggttccgaggttggcaactatttgcgtatgtttcgt
ggttccttatacaagagatacccctcactctggaggcgactggccacagtggaggagagg
aagaaaattgttgcatcttcacatgaatctcagcggagtcacagtcccagaagatatcat
ggttatacaacactagccacgagtgtgacccttttgaaagcttctgaggtagaagagatc
ttggatggaaacgatgagaaatacaaggcagtatcaatcagcactgagccccccacatac
ctcagagaacagaaggcaaaaaggaacagccaatgggttccaacccttccaaacagctcc
caccatcttgatgccgtaccatgctcaaccactattaacaggaaccggatgggtagggac
aagaagagaacatttccactctgctttgatgaccacgacccagctgtaatccatgagaac
gcctctcagccagaggtgctggttccaattcgactggacatggaaatagatggacaaaaa
ctgagggatgcttttacatggaacatgaatgaaaaactaatgactccagaaatgttttcg
gaaattctctgtgatgacctggatttgaatcccctgacctttgttcccgcaattgcatca
gcaatccgacagcagattgaatcttaccctacagacagtatcctggaggaccaatcagat
cagcgtgtcattattaagctcaacatacatgtggggaacatctccctggtggaccaattc
gagtgggatatgtcggagaaagagaattccccagagaagtttgcactgaagctgtgctca
gagcttgggctgggtggtgagtttgtcaccactattgcttacagcatccggggacagctg
agctggcatcagaagacgtatgcattcagtgagaaccctctaccaacagtggagattgcc
attcgtaacactggagatgctgaccaatggtgccctctacttgaaaccctgacagatgca
gagatggagaagaaaatccgtgaccaggacagaaacacaaggcgtatgaggcgtttggcc
aacactgctcccgcctggtaa
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