Eublepharis macularius (Leopard gecko): 129341821
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Entry
129341821 CDS
T09084
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129341821 (TIA1)
03041 Spliceosome [BR:
emc03041
]
129341821 (TIA1)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129341821 (TIA1)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129341821 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
129341821
NCBI-ProteinID:
XP_054853116
UniProt:
A0AA97KCH7
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All DBs
Position
14:37446321..37471524
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AA seq
392 aa
AA seq
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MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKNTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPIQQQNQV
GYPPPYGQWSQWYGNTQQIGQYMPNGWQVPAYGMYGQPWNQGFNQTQSSAAWMGASYGVP
PPPPPPPPPPQGQNGSVLTSQTGYRMAGFETQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaatgcccaagaccctgtatgtggggaacctatcaagagatgttactgaa
gctctaattctccagctgttcagccagattggaccatgtaaaaactgcaaaatgatcatg
gatacggctggaaatgatccatactgttttgtggagttctatgaacatcgtcacgcagct
gcagctttagctgctatgaatggacggaagataatgggtaaggaagtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcaacacactg
cgttcacaagaccacttccatgtctttgttggagacctcagcccagaaattacaacagaa
gacataaaagcagcttttgcaccatttggaagaatatcggatgcacgagttgttaaggac
atggcaacaggaaaatctaagggatatggctttgtttctttcttcaataaatgggatgcc
gaaaacgctattcagcagatgggcggacagtggcttggtggaagacaaatcaggactaac
tgggcaacgcgcaaacctccagctccaaagaatacatacgaatcaaatgccaaacagctc
tcctatgatgatgttgtaaatcagtccagtccaagcaattgcactgtgtactgtggtggt
gttacttcagggctaacagaacagctaatgcgccagacgttttctccttttgggcagata
atggaaattcgggtcttcccagataaagggtactcctttgtgcggttcaattctcatgaa
agtgctgcacatgcaattgtttcagtcaacggcacaaccatagaagggcatgttgtgaaa
tgttactggggcaaagaaacaccagatatgatcagtccaatccagcagcagaatcaagtg
ggatatccacccccttatggacagtggagccaatggtatggaaacacacaacagattggt
cagtatatgcctaatggctggcaagtccctgcatatggaatgtatggacaaccgtggaat
cagggatttaatcagacacagtcttctgcagcatggatgggtgcaagttacggcgtacca
ccacctccaccaccccctccacctcctccccagggacagaatggaagtgttctaactagt
caaactggatatcggatggcaggttttgaaacacagtga
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