Eublepharis macularius (Leopard gecko): 129342127
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Entry
129342127 CDS
T09084
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04140
Autophagy - animal
emc04148
Efferocytosis
emc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129342127 (VPS11)
04148 Efferocytosis
129342127 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129342127 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129342127 (VPS11)
Membrane trafficking [BR:
emc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129342127 (VPS11)
Hops complex
129342127 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf-C3H2C3
TPR_GEMI5
zf-RING_5
DivIC
Beta-prop_EML_2
zf-ANAPC11
zf-RING_11
MPAB_Lcp_cat
zf-RING_UBOX
PEX14-like_2nd
zf-RING_6
CC_Bre1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129342127
NCBI-ProteinID:
XP_054853683
UniProt:
A0AA97LF36
LinkDB
All DBs
Position
14:995364..1007644
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFAFFDREAVKERAGPEGGGGKSLLLPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLELSSFQAYKLRVTHLYQLKQHSILASVGEDEEGINPLVKVWNLEKHDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQTLHEGSYPITG
LAFRQSGKMTHLFVATTESIQCYTLSVKDYPQHELDTRGCGLRCSTLSDPSQDLQFIVAG
DECVYLYQPDERGPCFAFEGQKLIAHWYRGYLVIVSRDRKTSPKSDFAGGDPQNSDKQIL
NVYDLSNKFIAYSSVFDDVVDVLAEWGCLYVLTRDGKLHALQEKDTQTKLEMLFKKNLFE
MAINLARSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDIAKLEEFIKTSESEVHFDVEIAIKV
LRQAGCYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGRLPFEQAESNMKRYGKIL
MHHAPHETTDLLKILCTDYRPAGDGESLLGPEGRKANPEEFIPIFANNSRELRAFLEHMS
EVQPDSPQGVYDTLLELRLQNWAHEQDPKVKERLHNEAISLLKSGRFRSAFDKALVLCQM
HSFKDGVLYLYEQGKLFQQIMHYHMQNEQYRKVVEVCELYGDQEPSLWEQALGYFAHKEE
DCKEYITAVLKHIEAKNLMPPLLAVQTLAHNSTATLSVIKDYLVCKLQKQSRQIDQDEEK
IQKYREETKRIRKEIEELKTSPKIFQKTKCSICTSALELPSVHFLCSHSFHQHCFESYSE
SGSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQMKCSNDSFSVVADYFGRGVFNKLTL
ITDLPPGQSVAGLEAGLQRDLLIHSKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcggcgcttcgccttcttcgaccgcgaggccgtgaaggag
cgcgccgggcccgagggcggcggcggcaagagcctgctgctgccgccgggtattgccgtc
tgcgactcgggccgcggcagcctggtcttcggggatatggaaggccagatatggtttctg
ccgcgctcccttgagctcagcagcttccaggcgtataagctgagagtgactcacctctac
cagctgaagcagcacagcatcttggcctctgtgggcgaggacgaagaaggcatcaaccct
ttggtcaaagtttggaatctagagaaacatgatggtggaaatcctctgtgtaccaggatt
ttcccggcaataccaggcaacaagcctacagttgtgtcctgcctcacagtccatgagaat
cttaacttcatggctattggttttgcagatgggagtgttgtgcttacaaaaggagacatc
acaagagatcggcacagtaagactcagaccctccatgaaggtagttatccaattactggc
cttgccttccgccagtctggcaaaatgactcatctttttgttgctaccactgagagtatc
cagtgctacacactttctgtgaaagactatccacagcacgagctggacacgcgtggctgt
gggctgcgctgctctacgcttagtgacccctcgcaggacctccagtttattgtagcaggg
gatgaatgtgtgtatctgtaccagccagatgagcgtggcccatgctttgcttttgaggga
cagaagctaattgcccactggtatcggggctaccttgtcattgtgtccagggatcggaag
acctctccaaagtctgactttgctgggggcgacccacagaactctgacaagcaaatcctg
aacgtttatgacctgagcaacaagttcattgcctacagttcagtctttgatgacgtagtg
gatgtcctggctgagtggggatgtctgtatgtgctgaccagagatgggaagctccatgcc
ctgcaggagaaggacacacagactaagctcgagatgctcttcaagaagaacctctttgaa
atggccattaacttggccaggagtcaccacctagacagcgatggattgtctgagatcttc
cgccagtatggcgatcatttgtacaacaaaggcaaccacgatggggccattcagcagtat
atccgcacaatagggaaattggagccctcctacgtaatccgtaagttcttggatgctcag
cggatacacaacttgacagcctacttgcaaatgctccacttgcagtccctggccaatgca
gaccacacaacgctgctcctgaactgctacaccaagctgaaggacattgcgaagctggag
gagttcatcaagacaagcgagagtgaggtgcactttgatgtggagattgccatcaaggtg
ctgcgccaggcaggctgctactctcacgctgtctacctggccgagaagcatgcacaccac
gagtggtatctgaagatccagctggaagacatcaagaactaccaggaggccttgcactac
atcggcaggctgccctttgagcaggctgagagcaacatgaagcgctacggcaaaatcctc
atgcatcacgccccacacgagaccaccgatttgctgaagatcctgtgcacagattaccgg
ccagcgggggatggcgagagcctgcttgggccagaagggcggaaggcaaaccctgaggag
ttcattcccatttttgccaacaactcccgggaactgagagccttcctcgagcacatgtca
gaggtgcagcctgactctccgcagggggtatacgacacactgctggagctccgccttcag
aactgggcacacgagcaggatccaaaggtcaaagagagactgcacaatgaagccatttcc
ttgctgaagagtggaaggttccggagtgcctttgataaggctttggttctctgccagatg
cacagcttcaaagacggggtcctgtacctctacgaacagggcaagctgttccagcagatc
atgcactaccacatgcagaatgagcagtacaggaaggtggtggaggtctgcgagctgtat
ggagaccaagagccttccctttgggaacaggccctcggctacttcgcccataaggaggag
gactgcaaggagtacatcacagctgtgctcaagcacatcgaggccaagaacctcatgccc
ccccttctggctgtgcagactctggctcacaattctacagccaccctgtccgtcattaag
gattacctggtctgcaagctgcagaagcagagccgccagattgaccaggatgaggagaag
attcagaaataccgggaggagaccaagcggatccgcaaggagatcgaggagctgaaaacc
agtcccaaaatcttccagaagaccaagtgcagcatctgtaccagtgccctggagctgccc
tcggtgcacttcctctgcagccactccttccaccagcactgctttgagagctactcagag
agtggctcagagtgcccaacctgcatgccggagaatcgcaaagtcatggatatgatccgt
gcccaagagcagaagcgggacctacatgaccagttccagcatcagatgaagtgctccaat
gacagcttctcagtggtggcagactacttcggccgtggtgtcttcaacaagctcaccctc
atcacggacctccctcctgggcagtctgttgctgggctggaggcaggcctgcagcgggac
ctcctcatccactccaagcggagcacctag
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