Eublepharis macularius (Leopard gecko): 129342130
Help
Entry
129342130 CDS
T09084
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129342130 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129342130 (DDX6)
03036 Chromosome and associated proteins [BR:
emc03036
]
129342130 (DDX6)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129342130 (DDX6)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129342130 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
129342130 (DDX6)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129342130 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
129342130
NCBI-ProteinID:
XP_054853688
UniProt:
A0AA97KBC1
LinkDB
All DBs
Position
14:complement(870008..889563)
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSSGPGGGGTQAQQQMNQLKHPNTINNGTQQQAQ
GMPSTLKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEE
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggccagaacagagaaccctgttataatgggtctctccagtcaaaatggacag
ttgaggggcccagtaaaacccagcagtggcccaggaggcgggggaacacaggctcagcag
cagatgaaccagctgaaacatcccaacacgatcaacaatggcactcagcagcaagcccag
ggtatgccctccactctcaaacctggcgatgactggaagaagactttaaaactccctcca
aaagatctgcggatcaaaacttcggatgtgacctccactaaaggaaatgagtttgaagat
tactgtctgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaagccatct
ccaattcaggaggagagcattcccatagctctgtctgggagggacatcttggcaagagca
aagaatggaactggcaagagtggtgcctacctcattcccttacttgaacgacttgactta
aaaaaggacaacatacaagcaatggtgatcgtccccacgcgggagcttgccctgcaggtc
agccagatctgcatccaggtcagcaagcacatgggaggggcaaaagtgatggcaaccaca
ggaggaaccaacctgcgtgatgacatcatgaggctagatgatacagtgcatgtggtgata
gctacaccagggaggatcctggaccttatcaagaaaggagtggcaaaagtggaccatgtc
cagatgattgttctcgatgaggcagacaagttgttgtcccaagattttgttcaaataatg
gaggacattattctcacgctacctaaaaacaggcagatcttgctatactcagccactttc
cctctaagtgtacagaagtttatgaattcccacttgcagaaaccttatgagattaacttg
atggaagagctgacactgaagggagttacccagtactacgcctatgttactgagcgccag
aaagtgcattgcctcaacacgttattctccaggctccaaattaaccaatcgatcattttc
tgcaactcttcccaacgggttgaactgctagccaagaaaatctcccagctgggatattca
tgcttctacattcatgcaaagatgaggcaggagcaccgcaatcgagtgttccatgatttc
cggaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgttgtgataaactttgattttccaaagctggcagagacttatctccac
cgtattggcaggtcaggtcgatttggccatctcggcctcgccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaagagcagctggggacagaaatcaaacccatt
cccagcaacattgacaagagcctgtatgtggcggaataccacagtgagcctgtcgaggag
gagaaaccttaa
DBGET
integrated database retrieval system
