Eublepharis macularius (Leopard gecko): 129342467
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Entry
129342467 CDS
T09084
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129342467 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129342467 (USP39)
Spliceosome [BR:
emc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
129342467 (USP39)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129342467
NCBI-ProteinID:
XP_054854229
UniProt:
A0AA97KG18
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All DBs
Position
14:complement(39934021..39945801)
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AA seq
548 aa
AA seq
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MSVRVKRERSAREPPPRNSLSSRIKQEPGRESSASRGLVGRDPVRVKREPEDNEPRIKRE
PEEEEEDDEPTVKYGRFDPEDRRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLV
CGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFT
KQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAILQALSNVPPLRNYFLEEEN
YKNIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGD
GVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLLNDE
YQEKMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGIMEKEYKTYKENFL
KRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYD
LIANIVHDGKPAEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNE
EETNQQGA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcgggtgaaacgggagcggagtgctcgtgagccgcctccgcggaactcgctt
tcgagccggattaagcaagagccgggtagggagagcagcgcatctcgaggcttggtgggt
cgagacccggtgcgtgtgaagcgggagcccgaagacaacgagcctcgaatcaagcgggag
cccgaagaggaagaagaggacgatgagcccaccgtgaagtatggtcgatttgaccccgaa
gaccggaggagcaggcactgcccatatttggacaccataaacaagagtgttctggacttt
gattttgagaagttgtgttcaatctcgctctcgcatatcaatgtctacgcgtgtttggtg
tgtggaaaatatttccagggtcgaggcttgaagtcccatgcttacattcacagtgtccag
ttcagccaccatgtcttcctcaaccttcacaccttgaagttctactgcctgccagacaac
tatgaaatcattgattcttcccttgaggatatcacttatgttttgaagcccacctttact
aagcagcaaatagccaacttggacaagcaggccaaactttctcgggcctacgatggtacc
acatacctgcccggcattgtgggactgaacaacatcaaagctaatgactatgccaatgcg
atactccaggcactatctaatgtcccacccctgcggaattatttcctggaggaggagaac
tataagaatatccagcgccctccaggggacatcatgtttctgctggtccagaggtttggc
gagctcatgaggaagctgtggaatccacgaaacttcaaggctcatgtttctccccatgaa
atgctgcaggctgtggttctctgcagcaagaagaactttcagatcactaagcaaggtgat
ggagttgactttctttcctggttcttgaatgcattgcactctgcccttggtgggacaaag
aagaagaagaaaaccattgtgacagatgtcttccagggctccatgcggatattcaccaag
aaattgccacacccagatttgccagcagaggagaaggagcaactgctcctgaatgacgag
taccaggaaaaaatggtggaatccaccttcatgtacctgaccttggacctccccacggcc
cctctttacaaggatgagaaggagcagcttattattccccaggtgccacttttcaatatc
ctggccaagttcaatggaattatggagaaggaatataaaacctacaaggagaatttccta
aagcgtttccagctgaccaagttacctccttacctcatcttctgcatcaaaaggttcacc
aagaacaatttctttgtggagaagaaccccaccattgtcaatttccccatcacgaatgtg
gatctccgggaatacctctctgaagaagtacaggctgtgcataagaatacaacctatgat
cttatcgcaaacattgtgcatgatgggaagccagctgaaggggcatacaggatccatgtg
ctgcaccatggcacaggcaagtggtatgagctgcaagacttgcaggtgacggacattctc
ccccagatgatcacactttctgaggcttacattcagatctggaagagaagagataatgaa
gaagagaccaaccaacaaggggcttga
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