KEGG   Eublepharis macularius (Leopard gecko): 129342475
Entry
129342475         CDS       T09084                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129342475 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:emc03041]
    129342475 (PRPF4)
Spliceosome [BR:emc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    129342475 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_IFT140_1st WD40_like WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 129342475
NCBI-ProteinID: XP_054854240
UniProt: A0AA97LFX2
LinkDB
Position
14:complement(44474609..44485866)
AA seq 520 aa
MAASRSSAGAKTKASDDSEAPPAKKAPIFYGSLEEKERERLSKGESGMLGKDGVKAAIEA
GNINITTGEVFDLEDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF
GEGPAERRERLRNILSVVGTDALKKTKKDDDKSKKLKEEYQQTWYHEGPNTLKTARLWIA
NYSLPRAMRRLEEARLLKDIPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHFSPN
SKLLATACWSGLCKLWSVPDCNLIHTLRGHNTNVGAIVFHPKATISLDKKDVNLASCAAD
GSVKLWSLDSDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQE
GHSKGVYDIAFHVDGSLSGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI
ATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVWTHPGW
SPLKTLAGHEGKVMGLDVSLDGKLIATCSYDRTFKLWMAE
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcggcgtcgagatcctccgcgggtgcaaaaacgaaggcttcagatgacagcgaggct
cctcctgccaagaaggcccctattttttatggaagcctggaggagaaggaacgagagcgg
ctctccaagggagagtcaggaatgttgggcaaggatggggtcaaagctgcaattgaagca
ggcaatatcaacatcaccactggtgaagtctttgacctggaggaccacatcagtgagcgc
caggcagaagtgctggctgagtttgaacgccggaaacgagccagacaaatcaatgtttcc
acggatgactctgaagtcaaggcctgcctgcgagctcttggggagcccatcacgcttttc
ggtgaaggccctgcagagaggagggagaggttacgtaatattctctcagtggttggtaca
gatgccttgaagaagaccaagaaagatgatgacaaatctaagaaattgaaagaagagtat
caacaaacctggtaccatgaaggaccaaatactctgaaaacggccagattgtggatcgct
aactactcactccctcgggccatgaggcgtttggaagaagcccggttgctgaaggacatc
cctgaagccacaaggacgtcccagaaacaggagctgcacaaatctttgaggtctttgaat
aatttttgcagccaaattggggatgaccgtccaatctcatactgccacttcagccctaat
tctaaactcctggccacagcctgctggagtggactttgcaagctgtggtctgtgcctgac
tgcaatctcatccacacattacgagggcacaacaccaatgttggggcaatcgtcttccac
cccaaggcaaccatctccctggacaagaaggacgtgaatctggcctcatgtgcagctgat
ggctcggtcaaactctggagccttgacagtgatgagccagtggctgacattgaggggcac
acagtgagagtggcacgggtggcgtggcacccgtctggccggttcctgggcaccacttgt
tatgatcactcgtggcgtttgtgggacctggaggcccaggaggaaattctacaccaggag
ggacacagcaaaggggtctatgatattgccttccatgttgatggctccctgtctggcact
ggcggccttgatgcattcggccgggtgtgggaccttcgtacagggcgctgcataatgttc
ttggagggtcatctcaaggagatttatgggatcaacttctccccgaatgggtaccacatt
gctactggcagcggcgacaacacctgtaaagtatgggatctccgccagaggaaatgtatc
tacaccattcctgctcaccagaacctggtgactggggtgaagtttgaaccaaatcatggc
aacttcctactcactggtgcctatgacaacacagcaaaggtctggacacacccaggctgg
tctccactgaaaaccctggccggacatgagggcaaagtgatgggcttggatgtctccctg
gatggaaagctgattgcaacgtgctcttacgacaggaccttcaagctctggatggcagaa
tag

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