Eublepharis macularius (Leopard gecko): 129342531
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Entry
129342531 CDS
T09084
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
emc03037
]
129342531 (WHRN)
Cilium and associated proteins [BR:
emc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129342531 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
T15H9-4_C
HHD_RTEL1
USH1C_N
Motif
Other DBs
NCBI-GeneID:
129342531
NCBI-ProteinID:
XP_054854330
UniProt:
A0AA97LG12
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All DBs
Position
14:complement(50023607..50198609)
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AA seq
922 aa
AA seq
DB search
MSADLDRASLNSCASSSASLGSATGAPPALGGQPAGAGIRLLSANVRKLHGALNLLLSEA
EREQFIHCLNVYHCRRNVFDLVQTLKVLLDGPEKRQLLPMLRLVIPRSDQLLFDQYTSEG
LYLKADFVPGNANGGEVRQVTLKRNKAQEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG
LRVGDQILKVNDKALDKVTHAEAVKALKGSKKLNLSVLSVGRIPGGYVTNHIYTWVDPQG
RSVSPPTGLPQHQSSSLRKEGEKRSHLQLLQEGDEKKVNLVLNEGRSLGLMIRGGAEYAL
GIYITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRL
PHARTTVDETKWIASSQIGETVVNPAGAIGDHIAEVTTKPSFYRGLAGSQVTLSSLMNQS
RVMLEEHARHLLNEPERATMGYYLDEYKEDNISVDALVMALFELLNTHAKFSLLSEVRGV
ISPQDLDRFDNLVLKREIEFMKARQPSGTGTGTDSYSIMSYSDTVSSTGSHFTSTTVSSA
RNTSDLEGSGNGCQSSINALPDISLDEVSSFSEEPPAFKPPPPSPSSQTADSSTSQNRNP
AKDTLKRPSSESSQSGLFFMAPRVPTPSPSLSEKDTSSIASTATSSTEDSASSTIYASIS
RRPMDAHLSLVNQHPIGPFPRVQSPTRLKTPSPEATPASSLPSPKALSPSPPPPPSHPAP
PPPSEKGGPESSTTQHFIMVEVHRPNSEPDVNEVRSLPQARVSTLSQLSDSGQTLSEDSG
VDIGDAELSTKDRSRLQGPIKSRSPQEALRSDGQAETGPKPPGLLEPTSHLIRVTKSAPT
LGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGMALRGKEHREAARIIA
EAFKTKEKDYVDFLVTEFNIAL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggatctggaccgcgcgtctctcaactcgtgcgcttcctcctccgcctctttg
ggctccgctacgggggcgccgccggcccttggggggcagccggccggggcagggatccgg
ctgctgtcggccaacgtgcggaagctccacggggcgctcaacctgctgctgagcgaagcc
gagcgggagcagttcatccactgcctgaacgtctaccactgccggaggaacgtcttcgac
ctggtgcagaccctcaaggtcctcctggacggcccggagaagaggcagctgctgcccatg
ctgcgcttggtcatcccccgctccgaccagctcctcttcgaccaatacacctccgagggg
ctctacctaaaggccgacttcgtgcccgggaacgccaacgggggggaggtcaggcaggtg
accctcaagaggaacaaagcccaggagggcttgggcttcagcatccgaggcggctccgag
cacggcgtgggcatctacgtctccctggtggagcctgggtccctggccgagaaggagggc
ctccgagtcggcgaccagatcttgaaagtcaacgacaaagccctggacaaggtgacgcac
gccgaggctgtcaaggctctgaaagggtccaagaagctgaatctttctgtcctctcggtc
ggacgcatccctgggggttacgtcaccaatcacatctacacttgggtggatccccagggc
cgaagcgtttccccacccactggcctgcctcagcaccagagcagttccctgcgcaaggaa
ggcgagaagaggagccatctccaacttctgcaagaaggggacgagaagaaggtgaacttg
gtgctgaacgaagggcggtctctgggcctcatgatccgcggaggagccgaatatgccctt
ggaatttacatcacaggcgtggacaaaggctccgaagcagaaagcactggcttgaaggtt
ggggatcagattctggaggtgaatggcagaagtttcctgagtatcccacacgacgaagcg
gtgaaactcctcaagtcctcgcgccacctcatcatgactgtcaaagacattgggcggttg
cctcatgctcggaccacagtagatgagaccaaatggattgccagttctcagattggagag
accgtggtcaacccagcaggggccattggagaccacatagcagaggtgaccaccaagccc
tctttttacaggggtctggcaggatcccaggtaaccctgagcagcctcatgaaccaaagt
cgagtcatgttggaagagcatgcacgccatctcctgaatgagccagagagagccacgatg
ggctactacctggatgagtacaaggaggacaacatctcggtggatgcccttgtcatggcc
ctctttgaactgctcaacactcatgccaagttctcactgttgtccgaggttaggggggta
atatctcctcaggacctcgaccgtttcgacaacttggtcctgaagagagagattgaattc
atgaaagctcggcagccctccgggacagggactggcacagactcctactccatcatgtct
tacagcgacaccgtctcttctaccgggagtcacttcacctccactacagtcagctcggct
cggaatacatccgacttggaagggagtggaaacggatgccagagcagcatcaatgctcta
ccggatatctccctggatgaggtctcatctttctctgaggaacctccggctttcaagcct
ccgccacccagtccttcttctcaaacagcggactcctccacttcccagaacagaaaccca
gcaaaagataccctcaagaggccttcctcggaatcttcccagtcaggcttgttcttcatg
gctccgcgggtccccacgccgtctcccagcctctcagagaaggacaccagcagcattgcc
tctacagccacttcctccacggaggattctgcctccagcaccatctatgcatccatctcc
agaaggcctatggatgctcacttgtcattggtcaaccaacacccaataggacctttcccc
agggtccaatcaccgaccaggttgaagactccttcccctgaggctactccggccagcagt
ctcccaagccccaaagcattgtccccttctcctcctcctccaccatcccacccggctcct
cctccccccagtgaaaagggtggcccagagtccagcaccacgcagcatttcatcatggtg
gaagtccatcggcccaacagtgagccagatgtcaacgaagtgaggtctttgccccaagct
agagtttccacgctttcccagctctccgacagcgggcagactcttagtgaagacagcggc
gtggacatcggggatgcagagctaagcaccaaagacaggagccggctgcagggtcctatc
aagagcagaagtccccaggaagcattgaggagtgatgggcaggctgaaacaggccccaaa
ccaccaggcctcttggagccaacgtcccatctgatccgggtgacaaagagcgcaccgact
cttggaatcgccattgaggggggagccaacactcggcagcccctgcctcgaatagtgacc
atacagcgaggaggttctgcccacaactgcgggaagctgaaggtgggccacgtgatcctg
gaagtaaatggcatggccctacgggggaaagagcaccgtgaagcggcccgcatcatcgca
gaggcctttaagacgaaggagaaagactatgttgatttcctggtcactgaatttaacatt
gcactttag
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