Eublepharis macularius (Leopard gecko): 129342620
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Entry
129342620 CDS
T09084
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129342620 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129342620 (NUP188)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129342620 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
129342620
NCBI-ProteinID:
XP_054854452
UniProt:
A0AA97KDL5
LinkDB
All DBs
Position
14:complement(59705677..59757637)
Genome browser
AA seq
1736 aa
AA seq
DB search
MAAGGLCARSSRELWTILLGRSALREPGQIAEELNKHWQRLLEGLSYYKPPSASSAEKVK
ANKNVAAPLKELGLRVSKFLALDEEQSVQLLQCYLQEDYRGTRDSLKIVLQDERQSQSLI
LKLADYYYEERICILRCVLHLLTYFQDERHPYMAQYSQCVEKLDKELVPNYRKQFEELYK
AEAPTWETHGSLMTERQVSHWFVQCLREQSMLLEIIFLYYAYFEMASEELLAFAKMFKDQ
GFGSRQTNRHLIDESMDHLVDRIGYFSALILVEGMEIDSLHERVLDDRTEEHKFAASGQV
RQEMDCLLLTLGDIPHHAPVLLAWALLRHTVSPEESTGVIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDTACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLSPLLQLLTALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQTPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWDYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLASRMPAKVWTDLHHTGFLPFVSNPVSSLSHMISAEGMNAG
GYGNLLMSIEQPQGEYGVTISFLHLVMTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVRERIGCLILQLIHAILNLCPEMDPHSSSAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMATQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSNVVSPLEHALTQ
HGAHRNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFNLGEWSCLHVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSETSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSTEKRFAYWSGYVKSLA
FHVAETEGNGCASMAEYQMLISAWRMMLIISTSHADIMHLSDAEVQQLFLEVLSGTKALL
LVPTSVCCLQLGSMLCTLLLILLRQWKRELGSVDKIIDPLTQILDGVLHADQQLMERTKA
RVFSALITVLQMQEAKVSEIPQYSQLVLSVCETLQEEVVALFDQTRHCLTSGDSADDKDS
METDDASRHKQKDQRDGVCVLGLHLAKELCEVDEDSDCWLQVTRKIPILPTLFTTLEISL
RAKQNLHFTEASLHLLLTLARTQQGAAAVAGAGIMQSVCLPLLSVYQLSSNGAGQVPTSS
RKSLDAPSWPGAYRLSVSLMERLLKTLRYNFLADALDFVGVHQERILQCLNAVRTVQSLA
CLEEADHTVGFLLQLSNFTKEWHFHLPQLLRDVQVNLCYLCQACTSLLHSRKMLQHYLQT
KNGESLPSAVMPRAQRAPQASTKPSPETEAAEQKALRMVQYSLLKILSKCLAALRHFTPD
ICQILLDQSLDLAEYNILFVLSFTTPAFDSEVAPSFGTLLATVNVALNMLGELDKKKEPF
TVAAGLAAQQEGNKTLKSLLMFTMENCFYLLISQAVRYLKDPAVHPRDKQRMKQELSSEL
STLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggcgggctgtgcgcgagaagcagtagagagctatggaccattcttctgggc
agatcagctttgagagaaccaggtcagattgcagaggagttgaataaacattggcagagg
ctgctcgaagggctttcctactacaagccacccagtgcaagttcagcagaaaaagtaaaa
gctaataaaaatgtggctgctccactgaaggaattgggtctgcgtgtcagcaagtttctg
gctttagatgaagagcaaagtgtgcagctgttacaatgttaccttcaagaagattataga
gggaccagagactccttaaagattgtcttgcaagatgaaagacaaagtcagtctctcata
ctgaagcttgctgactattattatgaggaaaggatttgtattcttcgctgtgtccttcac
ctcctcacttatttccaagatgagaggcacccctatatggcccagtattcccagtgtgtg
gaaaaattagataaggaacttgttcctaattatcgaaaacaatttgaagagctgtataaa
gcagaagcaccaacatgggaaacacatggaagtctaatgacagagcggcaagtatctcac
tggtttgtgcagtgcctccgtgagcagtccatgctgctggaaatcatctttctttactat
gcctattttgaaatggcatctgaggaactgctggcttttgccaagatgttcaaagaccag
gggtttggctccaggcagaccaacaggcatctgattgacgaaagcatggaccaccttgta
gatcgtattggctatttcagtgctctaattcttgtggaaggcatggaaattgactctctg
catgagcgtgtattggatgatagaacagaagagcataaatttgctgccagtgggcaggtc
cgccaggaaatggattgcctgctgctaacacttggtgatatcccccatcatgcccctgtt
ctcttggcctgggctttgctccgccatacagtgagccctgaagagtcaaccggtgtgatt
aggcgaatgggaagcactgctatccagctgaatgtattccagtatctcacaaagctgctc
cgatcgctaagcagcggaggaaaaaattgtactgccagcacagcatgcatgtgtatttat
ggtctgctttcctttgtcttgacctcactggagttgcacactctaggcaatcaacaggac
atcattgatacagcctgtgaagtgctagctgcatcaagcattcctcaactgttctggaag
actgagccaacggcaggtctgggcattatcttggacagcgtatgcgggatgttccctcac
ctgctgtctccccttttgcagttactcacagccctcgtttcggataaatccacagcaaaa
aaggtgtacagtttcttggataagatgtctttctatattgagctgtataagcacaagccg
cctgatgtgatctctcatgaagacggtacactgtggcggaggcagacaccaaagctgctc
tatccccttggtctgggccaaaccaacctccggatacctcagggaacagtgggccaggtg
atgctggatgaccgagcctacttggtacgatgggattattcctacagcagttggacattg
ttcacttgtgaaattgagatgctgctccacgttgtgtcaacagcagatgtaattcagcac
tgccagagggtaaagccaatcatcgacctggttcacaaagtcatcagcacagatgtgtcg
atagcagattgcctcctgcccatcacatcgcgaatctacatgctgttacaaaggttaacc
actgtgatttctccccctgttgatgttattgcttcttgtgtcaactgtttgacggtcctg
gcttcccggatgcctgcaaaggtttggaccgaccttcaccatacaggatttttaccattc
gtttctaatccagtttctagtctgagtcacatgatcagtgcagagggaatgaatgctgga
ggctatggcaacttgcttatgagcattgagcagcctcaaggtgaatatggtgtgaccatc
tccttcctacatttagtcatgacgcttgtccgggggcagcttggaagtacccaaagccag
ggcttggtgccttgcatcgtgtttgtcttgaaggagatgttgccaaattaccacaaatgg
cgctataactcccatggagtgagagaacggatcggatgccttattttgcaattgatccat
gctatcttgaatctgtgccctgaaatggatcctcatagcagcagtgcccccagcctgcag
tccctttgcatcttcagcctggccaacacggaagcaggacaggccgtcatcaacataatg
gggatcggtgtggacaccattgatatggtgatggccacgcagtctagtagtgatgagtcg
caggggcaggggcagctgctgatccagaccgtgaagctggcattctcggtcaccaacaac
gtcatccggttgaaaccaccctcaaacgtagtgtctcctctagagcatgccctgactcag
catggtgcccacaggaacaacctgattgctgtcttggccaagtacatctaccacaagcat
gacccagccttgccccgccttgctatccagctcctgaagcgactggccacagttgctcca
atgtctgtctacgcctgccttggcaatgatgccgcagccattcgcgatgcctttctgacg
cgcctccagagcaaaattgaagacatgcgcattaaagtcatgattctggaattcctcaca
gttgctgtagaaacacaaccggggctcatcgagctgtttctcaacttggaggtgaaagat
gggagtgatggatccaaggaattcaacttaggtgaatggagctgccttcatgtggtcttg
gagctgatagactccaagcagcaggaacggtactggtgcccaccccttctgcaccgagca
gcaatcgcctttctgcatgccctgtggcaggaccgacgcgacagtgccatgttagtcctg
cggaccaagccaaagttttgggagaacctaaccaacccgctctttggaactcttccgcct
ccctctgaaacatccgagctcagcgtcttggatacctgcgccttgatcatgaaaataatt
tgcctggagatctactatgtggtcaagggttctctggaccagtcactgaaagacacgctg
aagaagttttccacagagaaacgctttgcttattggtcaggctacgtgaagtccctggca
ttccacgtggcggagactgagggcaatggctgtgcctccatggcagagtaccagatgctg
atctcagcctggcggatgatgctgataatttccaccagccacgctgacataatgcatctg
agtgatgctgaagtccagcagctgtttctggaggtgctgagtggaaccaaggctttgttg
cttgtccctacctcggtgtgctgccttcagctgggatccatgctgtgcactctgctgtta
atcctgctcaggcagtggaagagagagttgggctctgtggataaaatcatagatcccttg
acgcagatcctggacggagtgctgcacgccgaccagcagctgatggagcgaaccaaagct
agagtgttctctgctctcatcacggtcctgcaaatgcaggaggcaaaagtgagtgagatc
cctcagtattctcagctggtgctgagcgtgtgcgagactctccaagaggaagttgtggct
ctctttgaccagactcggcactgcctgacctctggagactctgccgatgacaaggacagc
atggagacggatgatgcctcccggcataagcagaaggaccaacgagatggggtgtgtgtg
ttggggcttcacctggcgaaggagctctgcgaagtggatgaggacagcgattgctggttg
caggtcactcggaagatcccaatactccccactctcttcaccaccctggagatcagcttg
agggcaaagcagaaccttcacttcacagaggcctcattacacctgctattgaccttggcc
aggacgcagcagggtgcagcagctgtggctggagcgggaatcatgcaaagcgtttgtttg
cccctcttgagtgtgtaccagctgagcagcaacggcgccggtcaggtaccaacttcgtcc
cggaagtctctggatgccccctcctggcccggtgcctaccgcctctccgtgtcgctgatg
gagcgccttctgaagaccctgcggtacaacttcttggcagacgccttggacttcgtgggt
gttcatcaggagaggatccttcagtgcctgaacgctgtccggacagtacaaagtctggcc
tgccttgaggaagcagatcacactgtcgggttcctccttcagctttccaacttcacaaag
gaatggcatttccatttgcctcagctcctgagggatgtgcaggtgaacttgtgttacctg
tgccaggcctgcacctccctcctgcatagccgaaaaatgcttcagcactatctacagacc
aagaatggagaatccttgccctctgccgtcatgcctcgggcccaacgtgcccctcaagcc
tccaccaagccaagcccagagacagaggctgccgaacagaaggccctgcgcatggtgcag
tacagcctcctgaaaatcctcagcaaatgcctcgctgctttgcgccacttcacccctgac
atttgtcaaatccttttggaccagtcactggacctggctgagtacaacattctttttgtg
ttgagcttcaccactccagcctttgattctgaagttgccccctcttttgggaccctcttg
gccactgtcaatgtggccctcaacatgttaggggagctggataagaagaaggagcccttc
actgtagctgcgggactggctgcccagcaggagggaaacaagacgctcaagtccctgctt
atgtttacgatggaaaactgcttttacctgctcatctcccaagctgtccgctatttgaaa
gatccagctgtgcacccccgtgacaagcagcggatgaaacaagagctcagctctgagctg
agcactcttctctccagcctatcccgctacttccgccgtgggggcccctcttctcctgcc
agcggtgtccttccctctccacagggaaaatctgcctcaaagctaggaccggaaggccag
gagcctctcttccagctggtacaggcctttgtcagacatgtgcaaagataa
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