Eublepharis macularius (Leopard gecko): 129342870
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Entry
129342870 CDS
T09084
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129342870 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129342870 (DHX15)
03009 Ribosome biogenesis [BR:
emc03009
]
129342870 (DHX15)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129342870 (DHX15)
Spliceosome [BR:
emc03041
]
Complex A
U2 snRNP components
U2 related factors
129342870 (DHX15)
Complex B
129342870 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129342870 (DHX15)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
90S particles
Helicases
129342870 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
DUF3915
Motif
Other DBs
NCBI-GeneID:
129342870
NCBI-ProteinID:
XP_054854794
UniProt:
A0AA97LGR0
LinkDB
All DBs
Position
15:13853544..13911150
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYGSSKKRVASDGKDRDRERERDDRSKDRDRDRDRERERDKEKDLRPST
NSALIAGVGLPSLKPAVLPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgccaccgccttgacctcggggacgactacggctccagcaagaagcgcgtc
gcctccgacgggaaggatcgggatcgtgaacgggaacgtgatgaccgctccaaagaccga
gaccgagatcgagatcgtgagagggaacgagataaagaaaaggatttacgcccttcaacc
aattctgcactcattgctggcgttgggttgccatctttaaagccagctgtgcttccgcag
ggtataaatccgtttacaaacctaccacacacacctcgttattacgagatcttaaagaaa
cggcttcagctccctgtctgggaatacaaggaaaggtttactgatatcttgattcggcac
cagtcttttgtacttgtgggtgagacaggctctggtaaaacaacacagatccctcagtgg
tgtgttgactacatgcgatcactgccggggccgaagagaggtgtggcgtgtacccagcct
aggagagttgccgcgatgagcgttgcacagcgggtcgctgatgagatggatgtgatgttg
ggccaagaagtaggttactccattcgatttgaagactgcagtagtgcaaaaactattctc
aagtacatgactgatggtatgctgctgcgtgaagctatgaatgaccctttgctggaacgt
tacggagtaataattcttgacgaagcccatgaaagaaccttggctactgatattttgatg
ggagttttgaaagaggttgtaaggcagagatctgatttaaaggttatagttatgagtgct
actctagatgccggcaagtttcaaatttattttgataactgtcctctcctcactatccct
ggccgtacacatcctgtggagatcttttatactccggaacccgagagagattaccttgag
gcagctattcgtactgtaatccagatacatatgtgtgaagaggaggaaggagaccttctt
ctcttccttactggccaagaggaaatagatgaagcctgtaagagaataaaacgtgaaatt
gatgatctgggccctgaagttggtgacattaagatcattccattatattcgacacttcca
ccacagcaacagcagaggatttttgagccaccccctcccaaaaaacaaaatggtgcaata
ggacggaaagtggttgtatctactaatatcgctgagacatcactaacaatagatggtgtc
gtgtttgtcattgatcctgggtttgctaagcaaaaggtatacaatcctcgtataagagta
gaatctctcttggtgactgcaataagcaaagcttctgctcagcaaagggctggtcgtgct
ggtcgtactagaccaggcaaatgttttcgactgtatacagagaaggcttacaaaactgag
atgcaggacaacacctatccggaaattttgaggtctaatttgggttctgtggtattacag
ctgaagaaacttggtatagatgacttggttcactttgattttatggatccaccagctcca
gaaaccttgatgagagccctagagcttttgaattacctggctgctttaaacgatgatgga
gacttgactgaattgggatccatgatggcagaatttccactcgatccacagctggctaaa
atggttattgcaagttgcgactacaactgttctaatgagattctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagccaagaaagcggcagatgaggcc
aagatgaggttcgcccacatagatggagatcatctgaccttgctgaatgtctatcatgct
ttcaaacaaaatcatgaatcggttcagtggtgctatgacaacttcatcaactacaggtcc
ctgatgtctgcagacaatgtgcgccaacagctgtcacgaatcatggatagatttaatttg
ccacgtagaagtacagacttcacgagcagagactattatatcaatatcaggaaagcgttg
gttactggttacttcatgcaggtggcccatttggaacggacaggacactatctaacagtg
aaagacaaccaggtagtgcagttgcatccttccaccgttcttgatcacaaacctgaatgg
gtgctttacaacgaatttgttcttaccacaaagaactacatacgcacttgtacagatatc
aagccagaatggttggtgaaaattgcccctcaatattatgacatgagcaatttcccacag
tgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtccaaggaatactca
cagtactga
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