Eublepharis macularius (Leopard gecko): 129343060
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Entry
129343060 CDS
T09084
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129343060 (HTT)
04131 Membrane trafficking [BR:
emc04131
]
129343060 (HTT)
03029 Mitochondrial biogenesis [BR:
emc03029
]
129343060 (HTT)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129343060 (HTT)
Membrane trafficking [BR:
emc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129343060 (HTT)
Mitochondrial biogenesis [BR:
emc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129343060 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
129343060
NCBI-ProteinID:
XP_054855012
UniProt:
A0AA97KFL4
LinkDB
All DBs
Position
15:complement(24717933..24855932)
Genome browser
AA seq
3098 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQTPAASASASAATPEEPPQRPRKDLSTSKKDRVNHCLTIC
ENIVAQRNSPEFQKLLGIAMELFLLCSDDSESDVRMVADECLNKVIKALMDSNLPRLQLE
LYKEIKKNGASRSLRAALWRFAELAHLVRPLKCRPYLENLLPCLTRVCKRSEESVQETLA
AAIPKIMSAFGNFANDNEIKALLKTFVANLKSSSPTIRRTAAASAVSICQHSRRTQYFYT
WLLNVLLGLLFPIEEEYPTVLILGVLLTLRYLIPLLQQQVKDTSLKGSFGMIRKETEISP
SLNQLIQVYELTLHYTQHQDHNVVTGALELLQQLLRTTPPDLLRALTTAGGIAQGSVSKD
EATSRNRSDSIVELIAGGGSSCSPVFPRKQKAIVVLGEEEGLEDETDGRSEVSNTDFAAS
MKTELAGELTSSSGVPTAGSVASSVANSSGRDIITEQPRSQHTLQPESDLTSCDLTSAAI
KGDSENDLLSGSSSQVSTVLSDPAVDMDGSTQASSPISDSSQTTTEGPDSAVTPSDSSEM
ILESAENQYSGMQIGQLQDEEDEASNVLQEETIDPFRNPYLALQQSHLLKSMGHSRQPSD
SSVDRFLPKEEMEPGDHENKPSRIKGDIGHYTDGDAAPLVHCVRLLSASFLLMGEKGVRV
PDKDVRVSVKALAVSCVGAAVALHPEAFFSKLYKMPLEASEEECEEQYVSDIVNYIDHGD
PQIRGATAILCGTVVCSILTKSRFNVENWLASIRASTGNSFSLVDCIPLLQRTLKDASSV
TCKLACTAVRHCIMSLCSSSYSTLGLQLIVELLTLRNSSYWLVRTELLETLAEIDFRLVS
FLEGRANNLHRGAHHYTGLLNLQERMLNNVVISLLGDEDPRVRHVAAASLIRLVPKLFFR
CDQGQADPMVAVARDQSSVYLKLLMHETQPASHFAVSTITRTYRGYNMLQSPTDVTMENN
LSRVISAISHALTTSSTRSLTFGCCEALCLLSTSFPVCTWNVGWHCGFSVMGSTEEYQKS
CTIGMAGLVLSLLSSAWFPLDLSAHQDALILAGNLLAASSLKSLKNPWTTEEDSNAGAAK
QEEPWPAVANRTLVALVEQIFSHLLKVINICAHVMDDVAPGPAIKATLPSLTNPPSLSPI
RRKGKEKEVVEQASVAIMSPKKSGENSSAPRQMDASGPAPTSKSSLLGNFYHLPSYLKLY
DVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILELATLQDIGKYVEEILGYLKSC
FNREPMMATVCVQQLLKTLFGTNLASQYDCLSSNPSRSQGKAQRLGSSNLRPGLYHYCFM
APYTHFTQALADASLRNMVQAEQEHDTSGWFDVLQKVSAQLKTGLSTVAKHRADKNIIHN
HIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFE
YIEVGLFRGSEAIIPSIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIP
ALQPIVHDLFILRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENE
DKWKRLSRQIADIILPKLAKQQMHIDSHESLGVLNTLFEILAPSALRPVDMLLRSMFVTP
STMGSVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCVTINRLRKRENI
TSAEEQVVEEQGKHLPEETFSRFLLQLVGILLEDITTKHLNVDMNEQQHTFYCQELGTLL
MCLIHTFKSGMFRRITAAAAKLFTGDGSSDVFYTLESLNGLVQSMIPTHPSLVLLWCQIL
LLVNYTDCSWWSEVHQTPKRYSLSSTKLLSPQISEGKDEPDSESKLGMCNREIVRRGALI
LFCDYVCQNLHDSEHLTWLIVNHVQDLIDLSHEPPVQDFISAIHRNSAASGLFIQAIQSR
CENFTAPTTVKKTLQCLEGIHLSQSGAVLMFYVDRLLCTPFRVLARVVDTLACRRVEMLL
APTLQNSIAQLPVEELDRIQEYLQNSGLAQRHQRLYSLLDRFRLTVASETSSPPPCVTSH
PLDGENQPALETITPDKDWYVSLVSSQCCTKSDSCLLEGAELVNRLPEPDLSSFMTHKDF
NISLLASCLSLGMRELSRDQKNLFETTRRVTLDHVTATVQKLPISHQVFQPLQPIETSVY
WNKLSDIFGDTVLYQSTMVLSRALSQYLVLLCKLPTSLRIPHDKESDILKFVVMSVEILS
WHLIHEHIPLSVDLQAVLDCCCLMLQQSSLWNLLASALYMTHACSLINCVRFIIEAVAVE
PGNQLLGSERKSPMRAASEDEVDSQAPKFEYITATCETVAELVECLQSVLALGHKRNSQI
PAFLTPVLKNIIISLSRLPLVNSYARIPPLVWKLGWSPKPIGDFGTTFPEIPVEFLQERE
IFKEFIYRINTLGWTNRMQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQ
AITSLVLSALTIPVTGNPAVSSLEQQPRNKALKALDTRFGRKLNVIRGIVEQEIQEMASK
RDNIVTHHLYQAWDPVPSLSPSSSGAVISHENLLLQINTEREIGNMGYKLGQVSIHSVWL
GNNITPLREEEWDEDEDDESEMPAPSSPLSSPINSRKHRAGVDIHSCSQFLLELYTQWIL
PSSPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKMHPAEDEILVQYLVP
ATCKAAAVLGMDKAVAEPVSRLLESTLRSTYMPSRIGALHGILYILECDLLDETAKQLIP
VITEYLLSNLKGIAHCVNVHNQQHALVMCAVAFYLIENYPLDVGPEFSSGIIQMCGVMLS
GSEESTPSIIYHCILRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLT
CMYTGKEKISPGRVTDSNQAAPDSESVIVAMERVSVLFDRVRKGFPFEARVVARILPQFL
DDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHTTGQSSMVRDWVMLSLSNFT
QRTPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNLFCLVAIDFYRHQID
EELDRRAFQSVFEVVATPGNPYHRLLTCLQNVHKVTAC
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagttgatgaaggccttcgagtccctccgctccttccagcagcag
cagacccccgccgcctccgccagcgcctcggctgccacccccgaggaaccgccccagagg
ccaaggaaagacctttctaccagcaagaaagaccgagtgaatcattgcctgacaatatgc
gaaaatatagttgctcaaagaaattctccagagtttcagaaattactgggcattgctatg
gaactttttttgctttgtagcgatgattcagagtcagatgtaaggatggttgctgatgaa
tgtctcaataaagttataaaggctttgatggattctaaccttccaaggttacagttagaa
ctctacaaagagattaaaaagaatggtgcttctcgaagtctgcgtgctgctctttggagg
tttgctgaacttgcacatctcgttcgtcccctaaaatgccgaccatacttagaaaacctg
ttgccctgcctaacacgggtatgcaagcgttctgaagaatcggtacaagagacactggct
gcagcaataccaaaaatcatgtcagcatttggaaactttgcaaatgacaatgaaattaag
gctttattgaagactttcgtagcgaaccttaagagcagttctcctactatccgtcgaaca
gcagctgcatctgctgtgagcatctgtcagcattcacgaagaacgcagtatttttatact
tggctactgaacgtactgctaggtttattgtttcccatagaagaggaatatcccactgtt
ttaattcttggagtattgctcactttaaggtatctaatacctttactgcagcagcaggtg
aaagatacaagtcttaaaggcagcttcggtatgatacgaaaagagactgagatttcccct
tccttaaatcagcttatacaggtttatgaattgaccctgcattatactcagcaccaggat
cacaatgttgtgactggagctttagaattactgcaacagcttctcagaacaacacctcct
gacctcctccgggccttgactactgctgggggtattgcacaaggcagtgtatccaaagat
gaggctactagtaggaaccgcagtgatagcatagtagaacttatagctggaggggggtct
tcatgcagccctgtttttcccagaaaacaaaaagctatagttgttctaggcgaagaagaa
ggtttggaagatgaaaccgacgggagatctgaggtcagcaacacagattttgcagcttct
atgaaaactgagctagctggtgaattgacttcctcatcaggggtgccaacagcagggtct
gtcgcaagctctgtggctaattcctccgggcgtgacatcataactgagcagccacgttct
cagcacaccttgcagccagagtcagacttgacaagctgcgatttgaccagtgcagctatc
aaaggagattctgagaatgacctcctcagcggcagctccagtcaggtcagcacggtcctg
tcagaccctgcagtggacatggacggcagcactcaggcctcctctcccatcagtgacagc
tcccagacgacgacagaaggtcccgattcagctgtcacaccttctgacagttctgaaatg
attctagagagtgctgagaaccagtattctgggatgcagattggacagctgcaagatgaa
gaagatgaagcctccaatgtcctccaggaggagaccattgatcctttcagaaatccttat
cttgcccttcaacagtcccatttgttaaagagcatgggacatagtagacagccatcagac
agcagcgtggacagatttttgccaaaagaagaaatggagcctggtgatcatgaaaataag
ccttccagaataaaaggagatataggtcattatactgatggcgatgctgctccgctagtc
cactgtgtgcgcctcctgtcagcctcttttctgcttatgggggaaaaaggtgtgcgggtg
cctgataaagatgtccgggtcagcgtcaaagccttagcagtgagctgcgtgggagcggct
gttgctctccatccggaagcgttcttcagcaagctctataaaatgcctcttgaagctagc
gaagaggaatgtgaagagcagtatgtgtctgatattgtgaattatattgatcatggagat
ccccagatcagaggagcaacagccattttatgcggaaccgtcgtttgttccattcttact
aaatctcgtttcaatgtggaaaactggctagcaagcatcagagcttccacagggaacagt
ttctccctggtagactgtatacctttgctacaaagaactctgaaggatgcgtcttctgtt
acatgcaagttggcttgtacagctgtgaggcattgcatcatgagtttgtgcagtagcagc
tatagcactttaggtttgcagttaatagttgaactcctaacattgaggaatagttcctat
tggctggtaaggactgagctgttggaaactcttgctgaaattgattttcggttggtcagt
tttttggaaggaagagccaataacttgcacagaggggctcatcattacacagggctgtta
aatcttcaggagcgtatgctcaataatgtagtcatttctttgcttggagatgaagaccca
agagtgcggcatgttgctgcagcttctttaataaggcttgtcccaaagctgttttttcgt
tgcgaccaaggacaagctgaccccatggtggctgtggccagggaccaaagcagcgtctat
ttaaaactactaatgcacgaaactcagcctgcttctcacttcgcagtaagcaccatcacc
agaacatacagaggatataacatgctacaaagtccaacagatgtcacaatggagaacaac
ctttccagggttatttcagcaatttcccatgccttgacaacatcatccacaagatctcta
acatttggctgctgtgaagctttgtgtcttctgtctacgtcgtttccagtttgcacctgg
aatgtaggatggcactgcggtttttcagtgatgggttctacagaggaatatcaaaagagt
tgcaccattggaatggctggtttggttctctctctcctttcgtcagcatggttcccactc
gatctctctgcccatcaagatgctttgatactggcaggaaacttgcttgcagctagttct
ttaaaatctttgaaaaacccctggaccactgaggaggacagtaatgctggtgcagcgaag
caggaggagccgtggccggctgtggccaacagaactctggttgctttggtagagcaaatc
ttttctcacttgctgaaggtcattaatatttgtgctcatgtaatggacgatgttgcgcca
ggcccagcaataaaggcaacattaccatctttaacaaatcccccctctctgagtccaatt
cgacgcaaaggaaaagagaaggaagttgttgaacaagcatctgtagcaataatgagccct
aaaaaaagcggtgaaaacagctcagctccaaggcagatggatgcttcaggtccagctcca
acaagcaaatcatcccttctgggcaacttctaccatctcccttcctatctcaagctatac
gatgttttgaaagcaacccacgccaactataaggttaccctggatctccagaacagcaca
gagaagtttggtggtttcctgcgatctgccctagatgtcctgtctcagattttagagctt
gcaacacttcaagacattggaaaatacgttgaagaaattttgggttatctgaaatcctgt
ttcaacagagaaccaatgatggcaactgtgtgcgtacagcagctgctgaagacattgttt
ggcacaaatttggcttcccaatatgattgcttgtcttcaaaccccagcagatctcaaggg
aaagcacagcgcttgggctcttccaatctgaggcccggcctttatcattattgcttcatg
gctccttacacacattttacgcaagccctggctgatgctagtttaaggaatatggtgcag
gctgaacaggagcacgatacttctggctggtttgatgtattgcaaaaggtttctgcacaa
ctgaaaactggcctaagcactgtggcaaagcatcgtgctgacaagaatattattcataat
cacattcgtttgtttgagccccttgtcatcaaagcattaaagcaatatactacaacaaca
tctgtacagctgcagaggcaagttctggatctccttgcacaactggttcagctacgagtt
aactactgccttctcgattctgatcaggtattcattggatttgtgctaaagcagtttgaa
tacattgaagtgggactgttcaggggatcggaagcaattattcctagtatatttttcttc
ctggttctgttgtcttacgagcgctaccactccaaacagataattggaattcctaaaatt
atccaactctgtgatgggataatggcgagtggaaggaaagctgttactcatgcaattcca
gctctgcaacccattgttcacgatctctttatattaagaggagcaaacaaagctgatgct
ggtaaagaactggaaacacaaaaagaagtggtggtttcgatgctgttgaggctaatacag
taccatcaggtactcgagatgttcatcctcgtactccaacagtgtcacaaagagaacgaa
gacaagtggaaaaggttgtctcgacagatagcggacataattctgccaaagttagcaaaa
caacagatgcatatagattcgcatgaatctcttggggtcctgaacactttatttgaaata
ttagcaccatcagctctccgtccagtggatatgcttttgaggagcatgtttgtcactccc
agtacaatgggctccgtgagcactgtccagttatggatatctggcattcttgctattctt
cgagttttgatttcacagtccacagaagacattgtcctttctcgtatccaggagctgtct
ttctccccttatttaatctcatgtgtgacaattaacagattaagaaaacgtgaaaacata
acttcagctgaagaacaagttgtcgaagagcaaggtaaacatctacctgaagagacattt
tccaggttcttgttacagctggtgggcatcctgttagaagatattaccaccaaacatttg
aatgtggatatgaatgaacagcagcataccttttattgccaagagttgggcacgttgctt
atgtgtttaattcacaccttcaaatcaggaatgttcagaagaatcactgcagcggccgcc
aagctctttacaggagatggatcatcggatgttttctatacccttgaaagcttaaatggt
cttgttcagtccatgatacccacacatccttcgttagtgctcctgtggtgtcaaatcttg
ctccttgttaattacaccgactgcagctggtggtcagaagttcatcagactccaaagagg
tacagtctttccagtactaaactgcttagccctcagatatctgaaggcaaagatgaacca
gattctgaatcaaaacttggtatgtgtaaccgagagattgttcgaagaggggctctcatt
cttttctgtgattatgtgtgccaaaacctgcacgattccgaacatttgacctggttgata
gtgaatcatgttcaagaccttattgacctctctcacgagcctcccgtgcaagacttcatt
agtgccattcacaggaattcagctgccagtggacttttcatccaggccattcagtcacgg
tgtgagaacttcacagctccaactacagtgaagaagactttacaatgcttagaaggaatt
catctcagccagtctggtgctgtgttaatgttttatgtggacaggcttctatgcactccg
ttccgcgtactggctcgcgtagttgacactcttgcttgccgacgagtagaaatgctttta
gctccaacgctgcagaacagcattgctcagttaccagttgaagaactagataggattcaa
gaatatcttcaaaacagtggactagcacaaagacaccaaagactctactcgctcttggat
aggtttcgcctcacagtagcctcagaaacaagtagcccacccccctgtgtaacttcacac
ccattggatggagagaaccagccagccctagaaacaataactccagacaaagactggtat
gtttcactagtgagttcacagtgctgcacaaaatcagactcctgcctactggaaggtgca
gaattagtgaatcggctccctgaaccggatctcagttctttcatgacccataaggacttc
aatataagccttctagcttcatgtctaagcctcggcatgcgggaactctccagggatcag
aagaacctttttgaaacaacccgtagggtaactcttgatcatgtgactgctacagtacaa
aaacttcccatcagtcatcaagtctttcagccattacagccaattgaaacatcagtgtac
tggaacaagctgagtgatatatttggtgacacagtgctttatcagtctacaatggtcctg
tctcgtgctttaagtcaatatctggtgttactttgtaaactgccaacctctctccgcatt
ccacatgacaaagagagtgacattctgaagtttgttgtaatgtctgtagagatactttca
tggcatttgatacatgaacatattccactgagtgttgatctccaggctgtgttggattgc
tgctgcctgatgttgcaacaatccagtttgtggaacttgctggcttcagccctgtacatg
acacatgcttgttccctgatcaactgtgtacggtttattattgaagcagtggcagttgaa
cctggaaatcagcttcttggttcggaaaggaagagtcccatgagagctgccagtgaagac
gaagtagattctcaagcaccaaaatttgagtatattacagcaacttgtgaaaccgtagct
gaactggtggagtgtctgcaatctgtcttggctttgggacacaaaagaaacagccaaatc
ccagcatttctaacaccggttcttaaaaacatcatcatcagcttgtccaggctgccttta
gtaaacagctatgcaagaattcctcctctggtctggaagttgggttggtctccaaagcct
ataggtgattttggcacaactttcccagaaatccctgtagaatttcttcaggagagagaa
atattcaaggagttcatctatagaattaacacactgggatggacaaaccgtatgcagttt
gaagaaacctgggctacccttcttggtgtgcttgtaacacagccaattgtaatggatcaa
gaggaaaaccagcaagaggaagacacagaaagaacccaaataaacgttctcgctgttcaa
gccataacatccttggtgttgagtgcgctgaccataccagtgacaggcaatccggcagtt
agcagcttggaacagcaacctcggaacaaagcattaaaagctttggatacaaggtttgga
aggaaattaaatgtcatcaggggaattgtggagcaagaaatacaagaaatggcatctaaa
agagacaacattgttacccaccatttgtaccaagcctgggatcccgttccatctctgtcc
ccatccagttcaggtgctgttatcagccacgaaaaccttctgctgcaaatcaatacagag
cgtgaaataggaaatatgggttataaactaggacaggtttctatccactccgtgtggtta
ggaaataacatcactccattgcgggaagaagagtgggatgaagatgaagatgatgagagt
gagatgcctgctccttcttcacccctgtcctctcccatcaattccaggaaacaccgtgcg
ggcgtggatatacattcttgttcccagttcttgttggagttgtacactcagtggatcctg
ccatcaagcccaagcaagaggactccagtaatcctgatcagtgaagttgttcgatctctt
ttggcagtgtccgacttatttacggaacggaatcagtttgagatgatgtacacaacatta
acagagctgcggaagatgcatcccgcagaagatgagattcttgttcaatatttggtccca
gcgacatgtaaagcagctgctgttcttggaatggataaagctgtagctgagccagtgagc
cgcctcctggaatccacattgcgcagtacttacatgccaagccgaataggagccctacat
ggcattctttacatcctggaatgtgacctccttgatgaaacggccaaacagctcattcca
gttatcacggaatatctgctttctaacctgaaaggcatagcccattgtgtgaatgtccac
aaccagcagcacgccttagtaatgtgtgcagtggcattctatttaatagaaaattaccca
cttgatgtcgggcctgagttctcttcaggaattatacagatgtgtggagtgatgctgtct
ggaagtgaagaatccacaccctccattatttatcactgcatcctgagaggcttggaacgg
ctcctcctttcagagcaactctctcgactggatagtgaatccttagtgaaactgagtgta
gaccgtgtgaatgtacagagcccccacagagccatggcggcgctggggttaatgctgact
tgcatgtatacaggaaaagagaaaatcagcccaggacgagttacggattccaatcaagct
gccccagatagtgagtctgtaattgtggctatggagcgtgtttctgttctttttgacagg
gtccgaaaaggatttccctttgaagccagggtagtagctcggatactccctcagtttctt
gatgattttttccctccgcaagatgtaatgaataaagttattggagaatttttatctaac
cagcagccatacccacagtttatggcaactgtggtgtataaggtatttcagaccttgcat
actactggccagtcatccatggtccgtgattgggtgatgctgtcgctctccaatttcaca
cagagaacacctgtcgccatggcgatgtggagtctgtcttgtttttttgtcagcgcttcc
accagccagtggatttcagctatccttccacatattatcagcagaatgggaaaatcagaa
caagtggacgtaaacctcttttgcttggtggccatagacttttacagacatcaaatagac
gaagaactggaccgcagagcctttcagtccgtatttgaggtggtagcgacacctgggaac
ccgtatcaccgcttgcttacatgtttgcaaaacgttcacaaggtcacagcatgttga
DBGET
integrated database retrieval system
