Eublepharis macularius (Leopard gecko): 129343478
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Entry
129343478 CDS
T09084
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129343478 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emc01009
]
129343478 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emc04515
]
129343478 (PCDH7)
Protein phosphatases and associated proteins [BR:
emc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129343478 (PCDH7)
Cell adhesion molecules [BR:
emc04515
]
Cadherins
Protocadherins
129343478 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
LYRIC
DUF6479
Syndecan
Motif
Other DBs
NCBI-GeneID:
129343478
NCBI-ProteinID:
XP_054855661
UniProt:
A0AA97LHK5
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Position
15:complement(5811327..6458112)
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AA seq
1260 aa
AA seq
DB search
MRALLGFLRSCYCCCCFLLFLPPPLWVSLAAAKQLLRYRLAEEGPADIRIGNVASDLGIV
TGSGDVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVIG
PSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIE
RYELLQEPAGEGSRRGSSGGAGSAAAASDSALYPGGSKRRQEAEGAARSSVFELQVADTP
DGEKQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSV
YEADLAENSSPGTPILQLRAADSDVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHR
IDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASV
AEDVLVDTPVALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSA
PLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFGQAVLEVSFPENNSPG
ERVATVLATDADSGKNAEIAYSLEASPLAPEAPAGLFTIDPDSGDVRVQAALDREQKDTY
EFQVSARDKGVPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMD
ADKGRNAELSLSIQPGEREPGAPGIFSIENETGTIFSTVSFDRELQTSYTFKVKAVDGGE
PARSATATVSLFVMDENDNAPAVTAPANGSYELLRPSSQVRTVVAAVQARDADAGQNAEL
SYSLVGGNPFKLFEVDPSSGVVSLVGKLAPKHYGLHRLVVQVNDSGQPAQSATALLHVFV
NESLGNASLVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVVGVVAGVMAVVLLILLVV
LARYCRAKGKHGGYEAGKKDHEDFFAPQPHDKAKKPKKDRKGKKGGKQPLYSSIVTVEAS
KPNGQRYDGVNEKLSADSPAMSRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGK
KHQAVQELPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVTQPQDPHQ
GSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLP
DVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEQLANGEAS
LMGDRNRNLLSKKLTSSYETYSAASFSKNEEASPEDIPLTQTGEYKPSPVSTLTRREVYL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgctgctgggctttctgcggagctgctactgttgctgctgcttcctccttttc
ctgccgccgcctctgtgggtcagcctggcggcggcgaagcagctcctccgctaccggctg
gccgaggaagggccggccgacatccgcatcgggaatgtggcttcggacctgggcatcgta
acgggctctggcgacgtgacgttcagcctggagtccggctcggactacctgaagatcgac
aacatgacgggcgagctgagcaccaccgagcggcgcatcgaccgggagaagctgccgcag
tgccagatgatcttcgacgagaacgagtgcttcctggacttcgaggtgtccgtcatcggg
ccctcgcagagctgggtggacctcttcgagggccgggtcatcatcctggacattaatgac
aacacccccaccttcccctcgccggtgctcaccctcaccgtcgaggagaatcgcccggtg
ggcaccctctacctgctgcccaccgccaccgacagggacttcggccgcaacggcatcgag
cgctacgagctgctccaggagcccgcgggtgaggggagcaggcggggcagcagcggagga
gcgggctcggccgccgccgcctctgacagcgccctctaccccgggggcagcaagcggcgg
caggaggccgagggcgcagcgcggagcagcgtgttcgagctgcaagtggccgacaccccc
gacggcgagaagcagccgcagctgattgtcaaaggggcgctggaccgcgagcagagggac
tcctacgagttgagcctgcgggtgcgggacgggggagaccccgcacgctcctcgcaggcc
atcctgcgggtgctgatcaccgacgtgaacgataacagcccccgcttcgagaagagcgtc
tacgaggccgacctggccgagaacagcagccccggcacaccgatcctgcaactgagagca
gccgactcggatgtcggagtgaacgggcagatcgagtacgtctttggggcagccaccgag
tcggtgcggcggctgctgcgcctggacgagtcctctggctggctaagcgtcttgcaccgc
atcgaccgagaggaggtgaaccagctgcgcttcaccgtcatggcccgggaccgcgggcag
ccgcccaagaccgacaaagccactgtggtgctcaacatccgggacgagaacgacaacgtg
cccaccatcgacatccgtaagatcgggcgcatcccgttgcgcgacggggtggctagcgtg
gctgaggacgtgctggtggacacccctgtggccctcgtgcaggtctcggaccgggaccag
ggcgagaacggcgtagtgacctgcaccgtggtgggggacgtgcccttccagctcaagccg
gccagcgaaggggaaggggagccccagaacaagcgcaagtacttcctccacacctcggcc
cccctggactacgaggccgtgcgcgactacaacgtggtcatcgtggctgtggactcgggc
agccccagcctgtcgagcaacaactctctgctggtgcgagtcggggacaccaacgacaac
ccgcccgtcttcggccaggctgtgctggaggtctccttccccgagaacaactcccccggc
gagagggtggccacggtgctggccaccgatgccgacagcggcaagaacgccgagatcgcc
tactcgctggaggcctcgcccctggcgcccgaggcccctgccggcctcttcaccatcgac
ccggactccggggacgtgcgcgtgcaggccgcgctggaccgcgagcagaaggacacctac
gagttccaggtgagcgcccgcgacaaaggggtgccctcgctgcagggctccaccacggtg
gtggtgcgggtggccgaccgcaacgacaacgagccgcgcttcatgcaggacgtcttcacc
ttctacgtgaaggagaacctgcagcccaacagccccgtggggatggtgacggtgatggac
gccgacaaggggcgcaacgccgagctcagcctgtccatccagcccggcgagcgcgaacca
ggcgcgccgggcatcttctccatcgagaacgagacgggcaccatcttctccaccgtctcc
ttcgaccgcgagctgcagaccagctacaccttcaaagtgaaggcggtggacggcggcgag
ccggcccgctcggccaccgccaccgtctccctcttcgtcatggatgagaacgacaatgcg
cccgcggtcacagccccggccaatggctcctacgagctgctgcggccctccagccaggtg
cgcaccgtggtggcggcggtgcaggcccgggacgccgacgcgggccagaacgccgagctg
agctacagcctggtgggcggcaacccgttcaagctcttcgaggtggacccgtcgagcggc
gtggtgtcgctggtgggcaagctggcgcccaagcactacggcctgcaccgcctggtggtg
caggtcaacgacagcgggcagccagcccagtcggccacggcgctgctgcacgtcttcgtc
aacgagagcctgggcaacgccagcctggtggagagccaggtggcgcgcagcctgcacacg
ccgctggcccaggacatcgccggggaccccagctacgagctcagcaagcagcggctcagc
atcgtggtgggcgtggtggccggcgtcatggcggtggtgctgctcatcctgctggtggtg
ctggcccgctactgccgtgccaagggcaagcacggcggctacgaggccggcaagaaggac
cacgaggacttcttcgcgccgcagccgcacgacaaggccaagaagcccaagaaggaccgc
aagggcaagaagggcggcaagcagccgctgtacagcagcatcgtcaccgtggaggcctcc
aagcccaacgggcagcgctacgacggcgtcaacgagaagctctccgctgacagcccggcc
atgagccgctaccgctccgtcaatggcggccccggcagcccggacctggcgcgccactac
aagtccagctcgccgctgcccaccgtccagctccacccgcagtcgcccacggccggcaaa
aagcaccaagccgtgcaggaactgcccccggccaacaccttcgtgggcgccggggacaac
atctccatcggctcggaccattgctccgagtacagctgtcaggccagcagcaagtacagc
aagcagccgtttcgtagagtgacgttttcagttgtgactcagcctcaggacccgcatcaa
gggtcactgcagagttgctatgacagcggtctggaggagtcagaaacaccaagcagtaag
agttcttcagggccgcggctgggcgcccttccactcccagaggacaactacgaaaggact
acgccggatggcagtgttggtgaggcagagcatatggaaaatgattcacggcctttacca
gacgtcgccctgactgggaagtgcacgcgggagtgtgacgagtacggccattcggactct
tgctggatgccggtccgcacttcgcccgagaggaagcagaagagccagccaaagctctcc
actttcatgcctgttgatgaacggggcagtcaagagcagctggccaatggagaagcctct
ctcatgggtgaccgcaacagaaatctccttagcaaaaagttgacctcgtcctacgagacc
tacagtgcagctagtttcagcaaaaatgaggaagccagcccagaggatattcccctcaca
cagacaggggaatacaagccatctcctgtcagcacgttaactagaagagaagtttatctt
tag
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integrated database retrieval system