KEGG   Eublepharis macularius (Leopard gecko): 129343549
Entry
129343549         CDS       T09084                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129343549 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emc03400]
    129343549 (XRCC1)
DNA repair and recombination proteins [BR:emc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     129343549 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2
Other DBs
NCBI-GeneID: 129343549
NCBI-ProteinID: XP_054855789
UniProt: A0AA97KJ61
LinkDB
Position
15:complement(50148215..50168166)
AA seq 714 aa
MPEIAIRHVVSASSSDPTHCAENLLKADTYRKWKAAQAGEKQVSVILQFEKEEQIHSIDI
GNEGSAFVEVLVGSSASSSEQNYEVLLVTSSFMSPSESKSGTNLNRVRMFGSDKLVKATA
EKKWDRVKIVCTQPYSKSLAYGLSFVRFHSPPENNEINSKTSSPKVTKLGQFKVKDEDSD
SASLKPGALFFSRASKPLVSPSKASQNNQQVPSYATASLQTSMTSSPEPAPSAAEKPTVK
ASPKEPTPVKRKFEFSKENTSLPSTPKKTDPDTPRPALPPSKKHKASPSAPPPPKTPPSK
KPPQAQSSEGSAEGPFQHLLQGTVFVLSGFQNPFRSDLRDKALEMGAKYRPDWTPDSTHL
ICAFANTPKYSQVKGLGGIIVRKEWILDCYRTRRRLPCKRYLMDSPDSSSSEEESEEETS
ARHRKPLPHRQRADLSSSNHKPKTPSSPKAARPMQKKASSGEEEEEPGTSQNSNIHNNSR
VPEADSAASSDDEEPSGFRDNGEEGSGDTDDELRRVEEEHRKKQQGGRRAAPEPEDDPYG
GSTDENTDVEEKGEPDQPIPELPGAWRYSARPGVYVHWEFYTESDHCECEARYLLLFITS
RRSWGVFPITCFLGCRESNWPPSACKAEALSLSYDPVGYTCMIFILTSKKQSVLEPENFR
LHLPWGENLRAGVVGVPDSTLIYPGSRLQSTMEAQWMTLGLSPTLSLTHLTGLL
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgccggagatcgcgatccgacatgtggtgtcggccagcagctccgacccgactcactgt
gcggagaacctgctcaaggctgacacttaccgcaaatggaaagctgcccaggctggagag
aagcaagtttcggtcatattacagtttgagaaagaggagcaaattcacagcatcgacatt
ggcaatgaaggctctgcgttcgtggaagtgctggtcggcagctcggcctcctccagtgag
cagaactatgaggtcttgctggtcacgtcttccttcatgtctccctcggagagcaagagt
ggcaccaacctgaacagagtccgaatgtttggatctgacaagctggttaaagccacagct
gaaaagaagtgggaccgggtgaaaattgtctgcacgcagccgtacagcaagtccttggct
tacggcctctccttcgtgaggttccactcgcctcccgaaaacaatgagattaattccaaa
acatcgtccccaaaggtgaccaagctgggacagttcaaggtgaaggacgaggacagcgac
tccgcctccttgaagcccggcgctctgttcttcagccgtgccagcaaaccgctggtctcc
ccctcaaaagcctcccagaataaccagcaagtgcccagctacgctactgcctccttgcag
accagcatgaccagtagccctgagccagccccatcagctgcagaaaagcccaccgtcaaa
gcttctcctaaggagcccacaccagtcaagagaaagtttgaattcagcaaggaaaacacc
agtctcccctccacacctaagaagactgatcccgatactccccgccctgcactcccaccc
tccaagaagcataaagcatctccttcagcgccacccccaccaaagacacccccttccaaa
aagccccctcaagcccagtcttcggagggctcggccgaaggacctttccagcatcttctg
cagggcaccgtgtttgtgctgagtggtttccagaaccccttccgctcagacctgcgggac
aaagccctggagatgggggccaaataccggccggactggacccctgacagcacacacctt
atctgtgcctttgccaacacgcccaaatacagccaggtgaaagggctcgggggcattatc
gtgcgcaaggaatggatcctggactgttaccgcacgcgccggcgcctaccttgcaagcgc
tacctgatggacagccctgattcatccagcagcgaggaggagagcgaagaagagacctct
gctcgacaccgcaaaccccttcctcatcggcagagagctgacctctccagctccaaccac
aaacccaagacgcccagcagccctaaagcggcgcggcctatgcagaagaaggcatcctct
ggagaggaggaggaggagcccggcacatctcagaacagcaacatccacaacaactcacgg
gtgccagaggctgactctgcagcttccagtgatgacgaggaaccttcgggctttcgagac
aatggagaagaggggtcgggcgacacagatgatgagctgagaagagtagaagaggagcac
cgcaaaaagcagcaaggggggcggagggctgctccagagccagaagatgacccgtatggc
ggctccacagatgagaacacggatgtggaggagaagggagagccggaccagcctattccc
gagctaccaggggcttggaggtacagtgcaaggccaggagtttacgtacactgggagttt
tataccgaatcagaccattgtgaatgtgaagctcggtatttattgctttttattaccagc
aggagatcttggggggtctttcctatcacatgcttcctgggatgccgagaatcaaactgg
ccgccttctgcatgcaaagcagaggctctgtcactgagctatgacccagtgggatacaca
tgcatgatctttatccttactagcaagaagcagtctgtgctggaacctgagaacttccgt
cttcatctgccctggggagagaacctgagagccggtgtggttggagtgccggactcgact
ctcatttatccaggttccaggctccaatctaccatggaagctcagtggatgaccttgggc
ctctcacccactctcagcctaacccacctcacagggttgttgtga

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