Eublepharis macularius (Leopard gecko): 129343828
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Entry
129343828 CDS
T09084
Symbol
GARRE1
Name
(RefSeq) granule associated Rac and RHOG effector protein 1
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129343828 (GARRE1)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129343828 (GARRE1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4745
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
129343828
NCBI-ProteinID:
XP_054856175
UniProt:
A0AA97LHX2
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All DBs
Position
16:15509288..15595669
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AA seq
1057 aa
AA seq
DB search
MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELGRTLSTPLASPATTSPLVSPAAA
GSCNHATPIADIQQGISKYLDALNVFCRASAFLTDLFSSVFRNSHYSKAAMQLKDVQEHV
MEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQFLSQ
ALQKVQPVAHSCFAEVVAQERKNSSMAETSSANPTTELEEAVRSWRGAAEATSRLRERGC
DGCLAGIEVQQLFCSQSVAIPEHQLKELNLKIDSALQAYKIALESLGHCEYAMKAGFHLN
PKAIEASLQGCCSDAEAQQAGRRQTPPQPIQCELPTVPIQIGAHFLKGISFNESAADNLK
LKTHTMIQLIKETGCHNGVTPRDDSPVTEILNQVCPSTWRGACKTAVQLLFGQAGLVVVD
TAQIENKEAYAPQISLEGSKIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTA
VFDLSRWKEGREQALPCIQIQLQREICDFGSHIDLPPGNGSKSTGGLQKTFSKLTSRFTK
KTSCASSSNSGSYSIPSTPSKNLFIANNSEDKAKMPNNTDTRLQSILNIGNFPRAVESAQ
PGQSPSKQAVNGFLLDRRDIGKADSGKDAKGMNLPTDQEMQEVIDFLSGFNMGKSQQTSP
LVKRRNSVASSSAVAEQKPAAMQQQSSSHTPLHHLQPGLSQQPQKQQQQMQFYQHLLQPI
GPQQPQQQQPPPRPPGKWPTGSSQQPAQTVSPGLSHMPQWSSHAFSDLSSDLYSLGLVNS
YMDNMMSEMLGQKPPGPRNNTWPNRDQNDGIFGMLGEFLPFDPAVGSDPEFARYVAGVSQ
AMQQKRQAQHFRRPSNARSNWPHPDDPHRTWPFPEYFTEGEMTSSWSGTQGDSASSSDET
SSANGDSLFSMFSGPDIIAAVKQRRKHSSGEQDPTTLPSPPLLSTVDDHNQDNKTKTWPP
KAPWQHALPSQSMSLYQMSNPASQWDDTMQILQSPVWSTANDCTPSTGISSTFAYAQQQQ
QSPQQPPPPPSQHKPMNKGFKPFPVKHERRPSYMHQY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtattgctgcagtgcacaggaaagtaaaatggactataagaggcgctttttgcttggc
gggtccaagcaaaaagtgcagcaacaccagcagtatcaaatgccagagctaggcaggacc
ctgagcacgcctttagcatctccagccacgacatcccctctggtttccccggctgctgct
ggcagctgcaaccatgctactccaattgcagacatccagcagggaatctccaaatatctg
gatgcactcaatgtcttttgccgtgcgagcgctttccttacagaccttttcagcagcgta
tttcggaactcgcactattctaaggcagctatgcaactgaaagacgtgcaggaacatgtc
atggaagcagcgagtcgactcacggcagcaataaaaccagaaatagcaaaaatgcttatg
gaactgagtgctggagcagcaaactttaaagatcagaaggagttcagcctgcaagacatt
gaggtgcttggacgatgtttcttgacagtgatgcaggtacactttcagtttctatcccaa
gctctgcagaaggtccagcctgtggctcattcatgttttgctgaagtggtggctcaggaa
agaaagaattctagcatggctgagacatccagtgcaaaccccacaactgaactagaagaa
gctgtgcgatcttggagaggcgcagcagaggccacatcacggctgagagagagaggttgt
gatggctgtctagccggaattgaagtccaacagctcttctgttcccaaagtgtggcaatt
cctgagcaccagctgaaagaactgaacttgaaaatagacagtgctttgcaggcatataaa
atcgcattggagagtttgggtcactgtgaatatgcaatgaaggctggcttccatttgaac
ccaaaagctattgaagcaagtttgcagggctgctgcagtgatgccgaagcccaacaagct
ggtcggagacagactcctcctcagccaatccagtgtgaactcccaacagttcccattcag
atcggtgcacacttcctgaaaggaatatcctttaatgaatctgcagcagacaacctgaaa
ttgaaaacgcacactatgatacagctgatcaaagaaactggctgccataatggagtgacc
ccaagggatgactctcctgtgactgaaatactgaaccaggtttgtccttccacatggcga
ggagcgtgtaaaactgcagtacagttgctctttggccaagctgggctggtggttgtggac
acagcacagattgaaaacaaagaggcctatgcaccacagatcagtttagaaggttccaaa
atcgtggttcaagtaccatcaacttggtgcctaaaagaagatcctgcaacaatgtctctg
ctacagagaagcctggatccggagaagactttggggctggtagacgttctctataccgca
gtgtttgacctaagtcggtggaaggaaggaagggagcaagctttgccctgcattcagatc
cagctccagcgtgagatctgtgactttgggagccacattgacttgccacctggaaatgga
agcaaatcaacaggtggcttgcaaaagactttctccaagctgacgtcacggtttacaaag
aaaacctcttgtgcaagttcaagcaacagtgggagctactccattcctagtactccttcc
aaaaacctttttatagcgaacaactcggaggacaaagcaaaaatgcccaacaacacggac
acacggctgcaaagcattctgaacatcggtaacttccccagggcagtagagtcagcgcag
ccagggcagagcccaagcaagcaggctgtcaatgggttccttcttgacagacgggacatc
ggcaaagctgacagtggcaaggacgccaaaggcatgaatttaccaactgaccaggaaatg
caggaggtcatagatttcctctccggtttcaatatgggcaaatctcagcagacctcccca
ctggtaaaaagaagaaactccgttgcatcatcttcggccgtagcagagcagaagcccgca
gccatgcagcagcagtcttcatctcacacacctttgcaccatcttcagccagggctgtcg
caacagccacaaaagcagcagcaacaaatgcaattttatcagcatctgcttcaacccatt
gggccccagcagccgcagcagcagcagccgccaccgcgtccccctggcaagtggccaact
ggttccagccagcagccagcccagactgtcagtccgggattatctcacatgcctcagtgg
agcagtcatgccttttctgatctaagctccgatttgtatagtttgggcctggtgaacagt
tacatggacaacatgatgtcagagatgttgggacagaagccgccaggacctcgaaacaac
acgtggccgaatcgtgaccaaaacgatggaatcttcgggatgctgggagagttcctgcct
ttcgaccccgcggttggatctgatccagagtttgcccgctatgtggctggggtcagccag
gccatgcaacagaaaaggcaagcacagcacttccgtcgccccagcaatgcacgtagcaac
tggcctcatcctgatgacccgcacagaacctggcccttccctgagtactttacagaaggt
gagatgaccagcagctggtcgggtactcagggcgattctgccagctccagcgatgagacc
tcctctgccaatggagacagtttgttttccatgttctcagggccagacatcattgctgca
gtcaagcaaagaagaaaacacagcagtggcgagcaagatcccaccacgcttccatcccca
ccactcctttctacagtggatgatcataatcaggacaataaaaccaaaacctggcctcct
aaagccccttggcagcacgcactgccgagtcaaagcatgtctttgtaccagatgagtaac
cctgccagccagtgggatgacaccatgcagattctgcagtcaccggtttggtcaacagcc
aacgattgcactccatcgacagggatttcctccacttttgcctatgcgcagcagcagcag
caatcaccgcagcagccgccgccgccgccgtctcagcacaaaccgatgaataagggcttt
aaacctttcccagtcaagcacgaacgtagaccatcctatatgcatcagtactga
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