Eublepharis macularius (Leopard gecko): 129343882
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Entry
129343882 CDS
T09084
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emc03036
]
129343882 (TDRD12)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
129343882 (TDRD12)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129343882 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
129343882
NCBI-ProteinID:
XP_054856240
UniProt:
A0AA97KDI6
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All DBs
Position
16:complement(32425882..32467651)
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AA seq
1282 aa
AA seq
DB search
MIDIFILKIENPGCFWVHVKEGGRFVENETDYKKLHEEMNLFYNKSYKGVEEVKPSVLEE
GQVCVVYWQELKSWCRAIVKSIISCTEYYLVECFLVDHAKSVPVKTDRICVALESFMRLP
YRAKKFRLYCIKPVTLRFNYCNNNAEIVPTNRWDVAAIKYFQNLLNGTAKVEAKLCAIED
DNFDVYLYVTVKGQKVCVNDDLVAKNFAYYETKKDKLLSIVEKQKIQPSLSPEFYSEVMN
PAFVLWPTLLQAKESSDFKTCAAVSDNTEKIKCKRLEETASHNGITESNIVVAVPPLEKG
VTVSAQVDGKTDSTLHQKTAQNQEEPEKDLDKNTVCLKLLQFLNPDPLKASDRYDEKEGF
HVNVSTRLPIVLSNGIDPCTTLETAPLFPELRKELLRNQVLGPNHIQSYSWPPIARGCDS
VIIFPENDPLVYLPPLITFLQSRSCYVSLPARSGPVALIVCPGWKKAEQVFELLEIYTRC
SRPLHPMLLLLGLNKEDIKSVKIPRGCEVIITTPHNVTRLFEWHSLMFLKLCHLVFDEVE
VLFSKANEQMLNILDYYKNHLITEERESAPQQIVAVGSHWNKSLQYLTKEYMNDPYVVIT
SMEEAAIYGNVQQVVQLCLECDRVSTLLQVLDFTPTNGQKTLVFTRSTEETDTVSKAVES
TSIFCLKIQPGIDFDYAVALWNQRFSSGTHTVLVLTDDCMPALGITDATCVVHFSFPTSP
RIFGARLYSMSANFQNSFEKVLSLDQGEPKAKSILLLTEKSACHAAGVLRYLERTEAKIP
PELCDFIAGVLEAKEDSKSGRPLCHYLKAYGVCKDKHRCPDRHQINLQIDSPRKVTDETL
PIAGNVTILPLFIVDATRYFGRIVGKPKDQYTSLAEELKEYYKKASNRISVDTVEKLAMC
GLQEENSFHRVQVLEVAAKEENCVFYSVCIKYIDEGRSGQVQNYQLLNLPEKFQVFPPQA
VEFIVCRVKPIDKETEWHPKVTRYIHQKIRGKPHEAKIILTLGNTIWVDPMVRVTRLLDL
KTSINEYNVRSEILSTGMGVDNPEHTQELQRLFQNAGLAPEKKDLPPLMHLLKCGASELA
TPASQNGSDQVGVSSESIQEEVSSSVPSAEDNAIIDDDEAIQNKKAEESPKPHDKCFYPV
IKWFDKRDVVVMKIKLQNVTNYDCRFFTQRIIFSAFAGDKYYLADMELQDSILKEKSACL
LKSDEPVITLAKEKEEPWCNLLKHKNPNVTFDFDHLEDSEQKSPFPVGVGSKKVYQLAIE
EEEEEEESSEASDTESDDLSAD
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatatttatactgaagattgaaaatccaggctgcttttgggttcatgtaaaa
gaaggtggaagatttgtagaaaatgagacagactataaaaaacttcatgaagaaatgaat
ttgttttataataaatcgtacaaaggtgtggaggaagtcaagccatctgtgttagaagaa
gggcaggtttgtgttgtttattggcaggaactgaaatcctggtgcagagccattgttaaa
tcaattatatcatgtacggagtattaccttgttgagtgtttccttgtagaccatgccaag
agtgttcctgtgaaaacagacaggatttgtgttgccttagaatcatttatgagactgcct
tacagagcaaagaagtttaggctgtactgtataaaaccagtaacgctgcgtttcaactac
tgtaacaacaatgcagagatagtccctactaacagatgggacgttgcagctatcaagtat
ttccaaaacctcctgaatggaaccgccaaagttgaggcaaagttatgtgctatcgaagat
gacaattttgatgtgtatctttatgtcacagtaaagggtcaaaaggtatgtgtaaatgat
gatcttgttgcaaagaactttgcctactatgagacaaaaaaagacaaactgctgagtatt
gtggaaaaacaaaagatacagccatcattaagccctgagttttattcagaggtgatgaat
cctgcatttgttctgtggccaacattgttgcaggccaaggaatccagtgattttaaaaca
tgtgctgctgtttctgataatactgagaaaataaaatgcaagcgtctagaggaaactgcc
tcccataatggaataactgagtcaaatatagtggtggctgttcctcctttagaaaaaggc
gtaacagtttctgcacaagtggatgggaagactgacagcacattgcatcagaaaactgct
caaaaccaggaggagccagagaaagatcttgataagaatactgtctgtttgaagctccta
cagtttttaaaccctgatcctctgaaagctagtgacagatatgatgagaaagagggattt
cacgtgaatgtcagcacacgtcttcccattgttcttagtaatggaattgatccgtgcacc
actcttgaaactgcaccactctttcctgaactgagaaaggagcttctccggaatcaggtc
ctaggtcctaaccacatacagtcatattcctggccaccaatagctcgtgggtgtgattca
gttatcatctttcctgaaaatgatccacttgtatatcttccaccacttattacattcttg
cagtcaaggagttgctatgtgtccctgccagctaggagtggtccagtagcattaattgtg
tgccctggatggaagaaggctgaacaggtgtttgagttactagaaatctacacccgttgt
tctaggcctctgcaccccatgttgcttttattgggattgaacaaagaagatatcaagagt
gtgaaaattccaagaggatgcgaggtcattataacaacccctcataacgttacacggctg
tttgaatggcatagtttaatgttcctcaagctttgccatcttgtgtttgatgaggtcgag
gtgttgttctctaaagcaaatgaacaaatgttaaacattttagactattacaaaaaccac
ctcatcactgaagagagggaatctgcaccacagcagattgttgctgttggaagccattgg
aacaaaagcctacagtatttaaccaaagagtacatgaatgatccatatgttgtgatcaca
tccatggaagaagcagccatatacgggaacgtacaacaggtggtacagctatgtcttgag
tgtgacagagtctctacattacttcaagtattggattttactcctactaatggtcagaag
acattggttttcacccgttctacagaagaaacagatacagtttccaaggcagtggaaagc
acttcaattttttgcttgaaaatacagcctggaattgattttgattatgctgtagcactg
tggaaccaaagatttagctctggcacacatactgtattagttttaactgatgactgcatg
ccagccctaggaattactgatgcaacatgtgttgtccatttcagttttcctacctcccca
agaatcttcggtgcgcgtttatacagcatgtctgctaacttccaaaattcatttgaaaag
gtattgtctctggaccaaggagaaccaaaggcaaaatccatcttgttgttgacagagaag
agtgcgtgccatgctgctggggtgcttcgttatttggaacgcacagaagccaaaatacca
cccgaactgtgtgactttatagctggagtgcttgaagccaaagaagatagcaagagtggg
aggcctctctgtcactaccttaaagcatatggagtttgcaaggataaacaccgctgtcca
gatcgacatcaaattaatttgcaaatagattcaccccgaaaagtgacggatgaaactctc
cctatagcaggaaatgtaacgatactaccacttttcattgtggatgccacacggtacttt
ggccgcatagtaggtaaaccaaaggatcagtatacatctcttgctgaagagctgaaagag
tattacaaaaaagctagcaatcgtatttctgttgacacagtggagaagctggcaatgtgt
ggattgcaagaagaaaattctttccacagggttcaagtactggaagtggcagcaaaagaa
gaaaattgtgtattttatagtgtttgtatcaagtacatagatgaaggtcgatctggtcaa
gtccagaattatcagttgctgaacctgccagaaaaatttcaagtcttcccccctcaggct
gtggaatttattgtttgtagggttaaacctattgataaagaaacagagtggcatccaaag
gttactagatacatccatcaaaagatcagaggaaaaccacatgaagcaaaaataatactt
accttgggaaacactatttgggtggatccaatggttcgggtcactagactcttagatctg
aagacttctatcaatgaatacaatgttcgctctgagattctgtcgactggaatgggagtt
gacaatccagaacacacacaagaactccagaggttgtttcaaaatgctggactagcccct
gagaaaaaagacttgcctccattaatgcatcttctgaaatgtggagcaagtgagctggcc
acgcctgcttcacaaaatggctcggatcaagtcggggttagttcagagagcatccaagaa
gaggtcagttccagcgtgccaagtgcagaagacaatgccattattgatgatgatgaagcc
atacaaaataagaaggccgaagaatctccaaagccacatgacaaatgcttctatccagta
ataaagtggtttgacaagagggatgttgtggttatgaagataaaattacagaatgtgacc
aactatgactgcagatttttcactcagaggatcattttcagtgcttttgcaggagacaaa
tactatttggctgacatggagctgcaagatagtatcctcaaagaaaaatctgcatgcctt
cttaagagcgacgagcctgtgatcaccctggcaaaagagaaggaggaaccttggtgcaac
ttgctaaagcacaaaaaccctaatgtgacttttgattttgatcacttggaagattccgaa
caaaaaagcccctttcctgttggcgttggttctaagaaggtgtatcagcttgctatagag
gaagaggaagaagaggaggaatcttcagaagccagtgacacagagagcgatgatttgtct
gctgattaa
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