Eublepharis macularius (Leopard gecko): 129343967
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Entry
129343967 CDS
T09084
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129343967 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129343967 (EDC4)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129343967 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
129343967 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
ApoLp-III
WD40_Prp19
Beta-prop_TEP1_2nd
CelTOS
WDR55
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
129343967
NCBI-ProteinID:
XP_054856383
UniProt:
A0AA97LHI0
LinkDB
All DBs
Position
16:complement(31375861..31411431)
Genome browser
AA seq
1402 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPGGSVNENQRPPSSYNGDLNGLLVPDSVAGGDGASLA
KTVPQTVPLGTLQEKQVICLSGDDSSTCMVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYEWEQKYYYGNLIAVSNAYLAYAIRVASNGSAMVRVLSISTAERTLLKGFTGGIADL
AFAHLNSNQLACLDEAGNLFVWRLAMENGKIQEEILVNIKRPDGTPLNSFRRIIWCPFIP
EENEEACEEGSQTLALLHEDRAEVWDLDIIRANHSSWPVEVTGIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSVLPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQDEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDGLTTEGTQGTGTVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAAPILPHGSHE
DFAFPDHLADLGTEGLGSEKGSMHGSQPDVRRISELSVPVDFLSPSSDMKPKLMTPDAFM
TPSTSLQQITVSPGSSISSLTAVTAMSSSSVNEPSIPRQAEEVSLSPKLPLDPSLTLSSS
TSSLQTSPRNHSVLLPGLPDKLTPKAPVPVSPANPPLSLERQDVEPLSVPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRSFGAAPSGLPAEGLEPNHHADSMASAASALHLLSPR
NRHGSEHSHHSLDMASAEVDMLSAPSLLEAALPQENAASDTSVGQPWPAAPDITRETRNS
MADSPRNEVEEKHKSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTAVGFGAKAAAQ
RLPVKDWKAKGSPRASPKLKRKGKKEDGSRDMNQSPRSYDQQVPPEYQDELLCLLRSQQR
EIADLRQSQTELTQRLTDHLDAVQSSLMGHIERVMDSQQEQEQRRLDQVLAEGQQRNGQL
QEHLSQQLSQSLSAAACNRLERTIREEMKKTVSPCVSKTLDPITGQLSNTVAAKLTAIEG
TLKENVIKLVKSKNLTDAIARAAADTLQGPMQTAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKNKKAREQDARDSLLGQLRQLVNSFQSTTDQLASTIASSVHSE
VQHQLHILVGNMQESILAHVQRVIKGEVSTAMKEQQAAVTSSIMQAMRSAAGTPIPAAHL
DFQSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLL
SLIQQLSSDLGARTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHN
SLSKPARRLMIMLQGLVTPSMS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccagcatcgacatcgaggacgccactcagcacctgcgggacatcctcaag
ctggaccggccgggcggttcagtgaatgaaaaccagagaccgcccagttcgtacaacgga
gacttaaatggtttgctggtgccggattctgtggcaggtggagatggagcctccttggcc
aagacagtgcctcaaacggttcccttgggaacactgcaagagaaacaagtcatctgcctt
tctggtgacgacagttctacctgtatggtgataacagctaaagacgttgagatagtagcc
agcagcgactccagcatcaccagcaaagctagagggagcaacaaggtaaaaatccaaccg
gtagcaaggtatgaatgggagcagaagtattactacggcaacctgatcgctgtgtccaat
gcctacctggcatatgccattagagttgccagtaacggctctgccatggtgcgggtcctg
agcatcagcacagctgagcggactttgctgaaaggcttcacgggtggtatagcagacctg
gcttttgcccacctcaactccaaccagctggcctgcctggatgaagccggcaacctcttt
gtctggcgcctggccatggagaatgggaagatccaagaggagatcttggtgaacatcaag
cgacctgacgggacccccctgaacagcttccggaggatcatatggtgtcccttcatccca
gaggagaacgaggaggcttgtgaggaaggcagccagactctggccttgttgcacgaagat
agggcagaggtttgggatcttgatataatccgggccaaccacagttcatggccagtggaa
gtgaccggcatcaaagagggcttcatcgttgtgaaaggacacagcacgcgcctgagcgaa
ggagccctttccccagatggaactgtcttggccacagcaagccatgatggatatgtcaaa
ttctggcagatctacatagaagggcaagatgaaccaaggtgccttcatgagtggaagccc
cacgacggcagacccctctcctgtttgctgttctgtgacaaccataaaaaacaagaccct
gaagttcctttctggaggtttctcatcacgggagcagatcagaaccgagagctgaaaatg
tggtgcacagtatcctggacgtgtctgcagactgtccgattttcaccggatatcttcagc
tccatgagcgtccttcccagcctcaaggcctgcctggacctctcagccgagtacctgatc
ttgagcgacgtgcagcggaaggtcttgtatgtgatggagctggtgcagaaccaggacgag
ggtaaagcatatttcagctccatctcagagttcctgttgacccacccagtcctgagcttt
ggcatccaggtggtcagccgctgccggctgagacacacagaggtccttccggctgaagag
gagagcgatggcctgacaacagaaggcactcaggggactggaactgtcgaatcggctgca
ggggtgctgatcaaactcttctgtgttcacaccaaggcccttcaagatgtgcagatcaga
tttcagccactccacagtccggacacagctgctccaatccttccccatggttcccatgaa
gattttgcattcccagaccacttggctgacttaggcacagaagggttgggatctgaaaaa
gggtccatgcatggttcgcagcctgatgtacgacgcatttcagaactgtctgtaccagtg
gacttcctctccccctcaagtgatatgaagcccaagctaatgactcctgatgcattcatg
actcccagtacatctttgcaacagatcacagtttcgcctggaagcagtattagttccctc
acggccgtcaccgccatgagcagttcttcggtcaacgagccatccattcctaggcaggct
gaagaagtgtccttgagcccaaagttgccgcttgacccaagtctcacgctgagctccagc
accagtagcctgcagactagtcccaggaaccattcagtcctcctccccggccttcccgac
aaactgaccccaaaggccccagttccggtttccccagcgaaccctccactctcgctggag
cggcaggacgtagagcctctgtcagtgcctcagtcttcccccacccgcgaacgctcgccc
gatgtcatttcctcggcttccaccgccatgtcccaggacatcccggagatcgcctcggag
accctgcagcgcagcttcggtgcggccccctccgggctccctgctgaaggcctggaaccc
aaccaccacgctgacagcatggcgtccgcagcgtcggctctgcacttgctctctccacgg
aaccggcatggctccgagcacagccaccactccctggacatggcctctgccgaggtggac
atgctgagtgccccttccctactagaggcagccttacctcaggaaaatgcagcttctgac
accagtgtgggccagccctggccagcagcccctgacattaccagagagaccaggaatagc
atggcagacagcccaaggaatgaagtagaggagaaacataagagctcctatcacaggcac
agttaccatctgcttcaacatgacagtcaggacgccagtgctgagcaaagtgatcatgat
gatgaagttgccagcttggcttctacagcagttgggttcggtgccaaagcagctgcccag
cggctccctgtgaaggattggaaagccaaggggtccccacgagcttcacctaagctaaag
cggaaagggaagaaagaggacggttccagggatatgaaccagtccccgaggtcctacgat
cagcaggtgcctcctgagtatcaggacgagttgctgtgtctgctaaggagccaacagagg
gagatcgctgatctgagacagagccagacggagctgacgcagaggctcacggaccacctg
gacgctgtgcagagctccctgatgggccacatagagcgagtgatggattcccagcaagag
caggagcagcggcggctggaccaggtcctagctgaggggcagcagcgcaacgggcagctg
caggagcacctgtcccagcagctttctcagtccctttctgcagctgcctgcaatcgcctg
gagaggaccattcgcgaggagatgaagaagaccgtgtccccctgtgtttccaagaccttg
gaccccatcactggacagctgagtaacactgttgcagccaagctaacagccatcgaagga
accctgaaggagaatgtcatcaagctggtgaaatccaagaacctgacagatgccattgcc
cgagcggccgccgataccctgcaaggccccatgcagacggcataccgggaggcatttcag
agcgtggtgctgcctgcttttgagaagagctgtcagtccatgttccagcagatcaacgac
accttcaagcaaggcacacaagaatatattcagcagctagaaacacacatgaagaacaag
aaggcccgtgagcaggacgcccgggactctctgctgggtcagctccggcagctggtcaac
tccttccagagcacaaccgaccagctggcatccaccattgcgtccagtgtgcactcggag
gtgcagcatcagcttcacatcctcgtgggcaacatgcaggagtccatcctggcccacgtg
caacgagtgatcaagggggaggtgagcacagccatgaaggagcagcaggccgccgtcacc
tccagcatcatgcaggcgatgcgctcggccgccggcacgcccatccccgccgctcacctc
gacttccagtctcaacaggctcatgtgctgcagctcttgcaacaggggcacctcaatcaa
gccttccagcaggccctcacggcagccgacctgaacttggtcctctacgtctgcgagacc
gttgacccccagcaggtgtttgggcagcacccttgcccgctctcccagccggtcctcctc
tctctcattcagcagctctcctcggacttgggggcccggacagaactcaagctcaattac
ctagaggaggccgtgatgcacttggaccacagcgatcccatcacccgtgaccacatgggt
tcggttatgaaccaggtgcggcagaagctcttccagttcctgcaagcggagcctcacaac
agcctgagcaagcccgcccgccgcctcatgatcatgctgcaaggcttggtcacacccagc
atgtcctaa
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integrated database retrieval system
