Eublepharis macularius (Leopard gecko): 129344004
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Entry
129344004 CDS
T09084
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04137
Mitophagy - animal
emc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129344004 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129344004 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129344004 (AMFR)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
129344004 (AMFR)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129344004 (AMFR)
Multi subunit type E3
ERAD complex
129344004 (AMFR)
LMBR1L-GP78-UBAC2 complex
129344004 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
129344004
NCBI-ProteinID:
XP_054856442
UniProt:
A0AA97LLG8
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All DBs
Position
16:20637074..20673793
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AA seq
645 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALAGSVLSAYRALSQPPEEHLEAPPEPPTAAEAQPPG
ERERPAPALGPRGVDVAYYLCSDSLCVWVLVNTACCILMLIAKLIQCVVFGPLRVSERQH
LKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPT
TPMNSHIRVLTLLVAMLLSCCGLAVVCGVIGYTHGMHTLSFMAAESLLVTVRTVHVILRY
VIHLWDLNHEGTWESKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQ
LRYLFHEVQRRLRRHKNYLRVVGNMEARFAVATPEELAANNDDCAICWDSMQSARKLPCG
HLFHNSCLRSWLEQDTSCPTCRMSLNITDNHRAREDHQRENLDENLAPVAVAEGRPHLNQ
HNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNAMAHQIQEMFPQVPYPLIL
QDLQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPMERHSTDQEDTEEGTQTERV
PLELNSRLEEMAEFSEMEVDSAETEDFEVRGSRFSKSADERQRMLVQRKEDLLHQARRRY
LNKTSDEAPSGIPLQAEGVNSDPITLRRRTLAAAAERRLQKQHPS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctggagcgcttcccgtggcccagcctgcgcacttacacggcgctc
agcgctctggcgttggccggcagcgtcctcagcgcctaccgcgccctcagccagccgccc
gaagagcacctggaagcgccgcccgagccgccgaccgcggcggaggcgcagccgcctggg
gagcgggagaggccggcgccggcgcttgggcctcgcggggtggacgtcgcctactacttg
tgttcggacagcctctgcgtctgggtactcgtgaatacggcttgctgtattctgatgctg
attgctaaactaattcagtgtgtcgtgtttggtcctctccgtgttagtgagagacagcat
ctcaaagataaattttggaatttcatcttctacaagtttatctttatttttggcgtgcta
aatgtccagactgtggaagaagtggtcatgtggtgcctttggttctctggacttgtgttt
ctacacctcatggttcagctttgcaaagacaggtttgaatatctctccttttctcccacc
acacccatgaacagccacatcagagtcctgaccttgctggttgccatgctgctttcttgc
tgtggactggcagttgtgtgtggcgtgatcggatacacccatggaatgcacacgttgtct
ttcatggcagccgagtctctgcttgttaccgtgagaactgttcatgtgattttacgctat
gtcattcatctctgggatctcaaccacgaaggcacctgggaaagcaaagggacgtatgtt
tattacaccgatttcgtcatggagttaactcttctgtctctggatctcatgcatcacatt
cacatgctgctcttcggcaatatctggttgtcaatggccagcctggtgatcttcatgcag
ctgcgttacctgttccatgaggttcagcggcgacttcgtcgccacaagaactatctccgt
gtggttggaaacatggaagcaaggtttgcagtggcaactcctgaagagctagcagccaac
aacgatgactgtgccatttgctgggattccatgcagtctgcacgtaaactcccttgtgga
catctgttccataactcctgtctgcgctcctggctagaacaagacacttcctgccccacc
tgcagaatgtctctaaatatcaccgataaccatcgtgccagggaggatcaccaaagggag
aacctggatgaaaatctggctcctgtggcagtggcagaaggcagacctcacttgaatcag
cacaatcacttcttccactttgacggctcccgcatagctagctggctgcccagcttttca
gtggaggtgatgcataccaccaacatccttggtattgcccaggcaagcaactctcagctt
aatgctatggcacatcagatccaggagatgtttccgcaggttccttaccccctcattctg
caggatctgcagctgactcggtctgtagaaataaccaccgacaacattttggagggccgc
atccaggtgcccttcccaacacagcgatcagagagcatcaggcctgcattgaacagtccc
atggaaaggcacagcactgatcaggaggatactgaagagggtactcagactgaaagagtc
ccgctggaacttaattcacggctggaagaaatggcagagttcagcgaaatggaagtagac
tctgccgagacagaggactttgaagtcagagggagccgtttttccaaatcagctgatgaa
aggcagcggatgttagtgcagaggaaggaagatcttttgcaccaagctcgcagacgttac
ttgaacaaaacttcagacgaggctccctcaggcatccccctgcaggccgaaggggtgaat
tccgaccccatcactttgcggcgcagaacgttggctgccgccgcggaacgaaggcttcag
aaacagcatccatcctaa
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