Eublepharis macularius (Leopard gecko): 129344130
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Entry
129344130 CDS
T09084
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emc03000
]
129344130 (CTCF)
03036 Chromosome and associated proteins [BR:
emc03036
]
129344130 (CTCF)
Transcription factors [BR:
emc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129344130 (CTCF)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129344130 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
129344130
NCBI-ProteinID:
XP_054856610
UniProt:
A0AA97LID1
LinkDB
All DBs
Position
16:complement(31722060..31747445)
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AA seq
740 aa
AA seq
DB search
MEELLLESALEGDMEGEAVEAIGEESETFIKSKERKTYQRRREGGQEEDACPMPPNQADG
TEVVQDVTGGVQMVMMEQLDPTLLQMKTEVMEGTVQPDAEAAVDDTQIITLQVVNMEEQP
INLGELQLVQVPVPVSVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVV
KVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYD
FEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKS
HTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTH
EKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPY
ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGK
KCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSH
CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCTKCGKTFTRRNTMARHADNCTGPDGVEGEN
GGEPKKGKRGRKRKMRSKKEDSSDSEENAEPELDDNEEEEETAVEIEAEPEVEPVAPAPP
PAKKRRGRPPGKANQPKQPQPTAIIQVEDQNTGAIENILVEVKKEPEAETVAATAGAQPV
AVEAPNGDLTPEMILSMMDR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctgttgcttgaaagtgctctggaaggtgacatggaaggagaagcagtggaa
gctattggtgaggagtctgaaacgttcattaaaagcaaagaaaggaagacctatcaaagg
cgcagggaaggtgggcaggaagaggatgcttgcccaatgccgcccaaccaggcagatggg
actgaagtggtgcaggatgtcaccggtggcgtccagatggtaatgatggaacagttagat
ccaacgctgcttcaaatgaaaacagaagtaatggagggcaccgtgcaaccagacgctgag
gctgccgtggatgacacccaaataataacccttcaggttgtcaacatggaggagcaacct
ataaaccttggagaactacagctggtccaggtgcctgtcccagtgtctgtaccggttgct
accacttctgtggaagaacttcagggggcctatgaaaacgaggtctccaaaggaggccta
caggagggggagcccatgatctgccacaccctcccgttgccagaaggcttccaagtggta
aaagttggtgcaaacggtgaagtggagacactggaacaaggtgaacttcaaccacaggaa
gatcctaattggcaaaaggacccggactatcagcccccagccaaaaagacaaagaaaacc
aaaaagagtaaactacgttacactgaggaggggaaagacgtggacgtatctgtatatgat
tttgaagaggaacagcaagagggcttgctctcagaggtcaatgcggagaaggtggtgggc
aacatgaagccccctaagccaacaaaaattaaaaagaaaggagtgaagaagacattccag
tgtgaactgtgcagttatacttgtccacgccgttctaatctggaccgccacatgaaaagc
cacactgatgagaggccgcataagtgccacctctgtggtagagccttccggacggtcaca
ctgctgagaaaccatctcaacactcacacaggtactcgtcctcacaagtgccccgactgc
gacatggcctttgtgacaagcggtgagttggttcggcatcgccgctacaaacatacccac
gagaagccattcaagtgttccatgtgtgactacgccagtgtggaggtcagcaagttgaaa
cgtcacattcgctcgcacacaggggagcgtccattccagtgcagcttgtgcagctatgcc
agcagggacacttacaaactgaagcggcacatgagaactcattccggcgagaagccctat
gagtgttacatttgccatgctcgcttcacccagagtggaacgatgaagatgcacatcctg
cagaagcacacggagaatgtggccaagttccactgccctcactgtgacacggtcattgca
cggaaaagcgacctgggtgtccacttgcggaagcagcattcctatatcgagcagggcaag
aagtgtcgttactgcgatgctgtgttccatgagcgatatgcactcatccagcaccagaaa
tcccacaagaacgagaagcgcttcaagtgtgaccagtgcgattatgcgtgtcgacaggaa
cggcacatgatcatgcacaagcgaactcacactggagaaaagccttatgcctgtagccat
tgtgacaaaaccttccgtcagaagcagctgcttgacatgcacttcaagcgctaccacgac
ccgaactttgtcccagctgcctttgtctgcaccaagtgtggcaaaacgttcacgcgccgt
aacaccatggcccgacacgcagataactgcacaggccctgatggggtagaaggagagaat
ggaggagaacccaagaaggggaagcgtgggcgaaagagaaagatgcgctccaagaaagag
gactcttccgacagtgaagaaaatgcagagccagagttggatgataatgaagaggaggaa
gagacggcagttgaaatagaggctgagccagaagtagaacctgtggctccagcaccaccg
ccagcaaagaaaagaagaggaaggccgcccggtaaagccaaccaaccaaaacagccccag
ccaacagcaatcattcaggtggaagaccagaacactggtgcaattgaaaacattttagtg
gaagtcaagaaggagcccgaagcagagactgtagccgctacagcaggagcacagccagtt
gcggtggaagcgcccaatggagacctcaccccagagatgattctcagcatgatggaccgg
tga
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