Eublepharis macularius (Leopard gecko): 129344274
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Entry
129344274 CDS
T09084
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129344274 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129344274 (VPS35)
Membrane trafficking [BR:
emc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
129344274 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
ADIP
Motif
Other DBs
NCBI-GeneID:
129344274
NCBI-ProteinID:
XP_054856815
UniProt:
A0AA97KIS7
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Position
16:complement(36394231..36423701)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKSKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTEEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNNALTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPAEDPD
PEDFADEQGLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFGEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPSLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLII
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtccccgcaagatgagcaggagaaactcctagatgaagctatt
caggccgtcaaggtccagtccttccaaatgaaacgatgcttggataaaagcaagctaatg
gatgctttgaaacatgcctctaatatgctcggtgagttacggacttccatgttgtctcca
aagagctattatgaactctatatggctatttccgatgagctccactacttggaagtgtat
ctgacggaagagtttgccaagggacggaaagtggcggatctctacgagctggtacagtac
gctgggaacatcatcccgcgcctctatttactgataacagttggggttgtctacgtgaag
tccttccctcagtccaggaaggatattttaaaagacttggtggagatgtgtcgcggagtc
caacatcctctgagaggcctctttctccgcaactaccttcttcagtgcacgcggaatatc
ttgcctgatgacggagagcaacccgatgaagaaaccaccggggacatcagcgactccatg
gattttgtgctgctgaactttgcggagatgaacaagctctgggtgcgcatgcagcaccag
gggcacagccgggaccgcgagaagagggagcgcgagaggcaggagctaagaatcctcgtg
gggaccaacctggtccgtctcagccagctggagggagtcaatgtagaaagatacaagcag
attgttttgccgggcatattggagcaagtcgtcaattgcagggatgcgctagctcaagaa
tacctcatggagtgtatcatacaggttttccctgatgaatttcacctccagaccttgaat
ccgtttctccgagcatgtgcagaattgcaccaaaatgtgaatgtcaaaaatattattatt
gcattaattgataggctcgcgctgtttgctcatcgagaggacggaccgggaatccctgct
gatataaagctctttgacattttctcccagcaggtggctaccgtcatacagtccaggcaa
gacatgccttcggaggacgtggtgtccttgcaagtctctctcattaacctggccatgaag
tgctacccggatcgtgtagactacgttgacaaagtcctggagactacggtggaaatcttt
aataagcttaatctcgaacacatcgcaacgagcagtgctgtttcaaaggagctgacacgg
ctcttgaagatccccattgatacttacaacaacgcccttaccgtcttgaagctgaaacat
ttccatccccttttcgagtatttcgactacgagtccagaaagagcatgagttgttacgtg
cttagcaatgtgctagattataacacggaaatcgtctcccaagaccaggtagactccatc
atgaatcttgtatccacgctgatccaggatcagccagatcagcccgctgaagatccggac
cccgaggatttcgccgacgagcagggcctggtgggcaggtttattcacctccttcgttcc
gaagatcctgaccaacagtacctgatcttaaacacggctcggaagcacttcggcgcagga
gggaaccagcgcatccgtttcacgctgccgcctttggtctttgcggcctaccagctcgcg
ttccgctataaggagaactccaaagtggatgacaaatgggagaagaaatgccagaaaatc
ttttcctttgcgcatcagacaatcagtgctttgatcaaagctgagctggcagagctgccc
ctgcgcctcttcctccaaggggctctcgctgcgggggaaattgggtttgagaaccacgaa
acggtggcctatgaattcatgtcccaggcattctctctgtatgaagacgaaatcagtgat
tcaaaagcgcagctggccgcaatcaccttgataattgggacgttcgagcggatgaagtgc
ttcggcgaggagaaccatgagcccttgagaacgcagtgcgccttggcggcctccaaacta
ctgaagaagccagatcagtgccgggctgtcagcacctgcgctcatctcttctggtccggc
cggaacacggacaagaacggggaagagcttcatggcgggaagagagtcatggagtgccta
aaaaaggcgttaaagattgccaatcagtgcatggacccctctctccaagttcagctcttc
atcgagattctgaaccgatacatctacttctacgagaaggaaaacgatgcggtgacaatt
caggttttgaatcagctcatacagaaaatccgggaagaccttccgagcctggaatcgaca
gaggaaaccgagcaaatcaacaaacactttcacaacacgctggagcacttgcgattgagg
agggagtcgccggagtccgaggggcccatctacgaagggctgatcatttaa
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