Eublepharis macularius (Leopard gecko): 129344500
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Entry
129344500 CDS
T09084
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129344500 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129344500 (PRPF8)
Spliceosome [BR:
emc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129344500 (PRPF8)
Complex C
U5 SnRNP specific factors
129344500 (PRPF8)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129344500
NCBI-ProteinID:
XP_054857163
UniProt:
A0AA97LI70
LinkDB
All DBs
Position
17:complement(27307936..27330821)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPFRGPCPPMPAPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFLEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAENPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtgttccccttccgggggccctgccctccgatgcctgctcccttgacccca
ctccctgactacatgtctgaagaaaaacttcaggagaaagcccgcaaatggcagcaactc
caggccaaacgctatgctgagaagaggaagtttggcttcgtagatgcccaaaaagaagac
atgcctcctgagcatgtgaggaagatcatccgtgaccatggtgacatgaccaacagaaaa
ttccggcatgacaagcgggtttatttgggtgctctgaagtacatgcctcatgccgtcctg
aagcttctagagaacatgccaatgccctgggaacaaatacgggatgtgcctgtcttgtac
cacatcactggtgccatctcctttgtgaatgagataccgtgggtgattgagccagtgtac
attgcccaatgggggtctatgtggatcatgatgagacgagaaaagagggaccgccgccac
ttcaagcgcatgcgcttcccgcctttcgatgatgaggaaccgcctcttgactacgctgac
aatattctggatgtggagcccctcgaggccatccagctggaactggaccccgaggaggat
gccccggtcctggattggttttatgaccaccagcctctgaaggacaaccgcaagtatgtc
aatggctccacatatcaacgctggcagttcaccctccccatgatgtccaccctctaccgc
ctggccaaccagctcctcacagaccttgtggatgacaactatttctacctcttcgatctg
aaggccttcttcacctccaaggccctcaacatggccattcccggggggcccaagtttgag
cctctggtccgagacattaacctgcaggatgaggactggaatgaattcaatgacatcaac
aaaatcatcatccgccagccaatcaggactgagtacaaaatcgccttcccctacctttac
aacaacctcccccaccatgtccacctcacctggtatcacacaccaaatgtggtcttcatc
aagactgaggatccagacttgccagctttctactttgacccactcatcaaccccatttca
cacagacactctgttaagagtcaagagcctctccctgatgacgatgaggagtttgagctg
ccagaattcttggagccctttctaaaggacacgcccctctacacggacaacacagctaac
ggcattgcgctcttgtgggcacctcggcccttcaacttgcgttctggccgaacccgccga
gctcttgacatccctcttgtcaagaactggtaccgggaacattgcccagccggtcagcct
gtcaaagtccgggtctcctaccagaagctgctgaagtactatgtcctgaacgcactcaag
catcggccccccaaggctcagaagaagcggtatctcttccgctcattcaaggccaccaag
ttcttccagtcaaccaaactggactgggtggaggtgggcctccaggtctgccgccagggc
tacaacatgctgaacttgttgatccaccgcaagaacctcaactatctgcacctggactac
aacttcaacctcaagcctgtcaagactctcaccaccaaggaaagaaagaagtcccggttt
gggaatgcttttcacctgtgccgagaggtgctgcgccttaccaagctggtggtggacagc
cacgtccagtatcgactaggaaacgtggatgcttttcagttatcagatggtctgcagtat
atctttgcccatgttgggcagctgacggggatgtacagatacaagtacaagctgatgagg
cagatccggatgtgcaaagacctgaagcacctcatttactatcgtttcaatacagggcct
gtggggaagggccctggctgtggcttctgggcagcaggctggcgcgtgtggctcttcttc
atgcgaggcatcaccccactgctggagcgctggctgggcaaccttctggccaggcagttt
gaaggccgtcactcaaagggcgtggccaagacagtcaccaagcaacgtgtggaatcgcac
tttgacttggagctgcgtgccgctgtgatgcatgatatcctggatatgatgcccgagggg
atcaagcaaaacaaagcccggaccatcctgcagcatctgagcgaagcctggcgctgctgg
aaagccaatatcccttggaaggtgcctgggctacccactccaatcgagaatatgatcttg
aggtatgtgaaggccaaagctgactggtggacaaacacggcccactacaaccgggagcgc
atccgccggggtgccactgtagacaagacagtctgcaagaagaacctaggccgtttgact
aggctgtacttgaaagcagagcaggaacggcagcacaactatctgaaggatggcccatac
atcacagcagaggaggctgtggctgtctacaccacgacggtgcactggctggagagtcga
cggttttcgcccattcctttccctccgctgtcctacaagcatgacaccaagctactgatt
ttggccttggagcggctgaaggaagcctacagcgtgaaatcccgtctgaatcagtcacag
cgagaggaactgggtctcattgagcaggcctatgacaacccccacgaggccttgtcccgc
atcaaacgacacctgctgacgcagcgagccttcaaggaggtgggcattgagttcatggac
ctctacagccacctggtcccagtgtatgatgtcgagcccctggagaaaatcactgatgcc
tacttggaccagtatctgtggtatgaagcagacaagaggcggctctttcctccctggatt
aagccggccgacacagagcctcctccgttgcttgtgtacaaatggtgccaaggcatcaac
aacttgcaggacgtgtgggagaccagcgaaggggagtgcaatgtaatgctagagtcgcgc
tttgagaagatgtatgagaagatcgatcttacgctgctcaacaggctgctgcgcctcatt
gttgaccacaacattgctgactacatgacagccaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcttatgggatcattcgggggctgcagtttgcctccttcatt
gtccagtactacggtctggtaatggacttgcttgtgctcggcctccaccgggccagtgag
atggccggcccccctcagatgcccaatgacttcctcagcttccaggatattgccacggag
gtggcccaccccatccgcctcttctgcagatacatcgaccgcatccacatattcttcaga
ttcacagcagatgaggcaagggacctgatccagcgctacctcacagagcacccagacccc
aacaacgagaacattgtgggctacaacaacaagaagtgctggcccagggatgctcgcatg
cgcctcatgaaacatgatgtcaacctcggtcgtgctgtattttgggatatcaagaaccgc
ttgcctcgttcagtcaccacagtgcagtgggagaacagctttgtgtcggtgtacagcaag
gataaccccaacctgctcttcaacatgtgcggctttgaatgccgaatcctccccaagtgc
cgcaccagttacgaagagttcacccataaggacggcgtgtggaacctgcaaaacgaggtg
accaaagagcggacagctcagtgcttcctaagagtggacgatgaatccatgcagcgattc
cacaacagagtcaggcagatccttatggcctcaggatccactaccttcactaagatcgtg
aataagtggaacacagctcttattggtctgatgacctacttccgcgaggccgtggtgaac
acacaagaactgctggacttgctggtgaagtgtgagaacaaaatccagactcggatcaag
attggcctgaactccaaaatgcccagccgcttcccaccagttgtcttctacacacctaag
gagttgggaggcctgggaatgctgtccatgggccacgtcctcatcccccagtctgatctc
aggtggtccaaacagacagatgtaggcatcactcacttccggtcagggatgagccacgag
gaagaccagctgatccccaacttgtaccgctacatccagccatgggagagcgagttcatt
gactcacagcgggtgtgggcagaatatgcgctgaagaggcaggaggccattgctcagaac
aggcgcctgactctggaggatttggaagactcctgggacaggggcatcccccgcatcaac
accctctttcagaaagaccggcatactcttgcctatgataagggctggagggtcaggaca
gatttcaaacagtaccaggttctgaagcagaatcctttttggtggactcaccagcgccat
gatgggaaactctggaacctgaacaattaccgcacggacatgatccaagctcttggtggt
gtggagggtatcctggagcacacgcttttcaaagggacctatttcccaacctgggagggt
ctcttctgggaaaaggcaagtgggtttgaggagtctatgaagtggaagaagctgaccaat
gcccagcgctcgggtctgaaccagatccccaacaggaggttcactctctggtggtctccc
accatcaacagggccaacgtgtacgtgggcttccaggtgcagcttgacttgacaggcatc
ttcatgcatggcaagattcccaccctgaaaatctcccttatccagatcttccgggcccac
ttgtggcagaagatccacgagagcattgttatggacctgtgtcaggtgtttgaccaggaa
ctggatgccctggagatcgagacagtgcagaaggaaacgatccaccccaggaagtcctac
aagatgaactcctcctgtgcagacatactcctctttgcctcatacaagtggaacgtgtca
cgaccatcgctgctggcagactccaaggatgtgatggacagcaccaccacgcagaagtac
tggatcgacatccaactgcgctggggcgactatgactcccatgacattgagcgctatgct
cgggccaagttcctggactacaccacggacaacatgagcatctacccatcccccacaggt
gtcctcattgccatcgacctggcctacaacctgcacagtgcctatggcaactggtttcca
gggagcaagcctctgatccagcaggccatggccaagatcatgaaggcaaaccctgctttg
tacgtgctgcgggagcggatccgcaaaggccttcaactttactcttcagagcctactgag
ccctacctatcttctcagaactacggggagcttttctccaaccaaatcatctggttcgtg
gatgacaccaacgtttacagggtcaccattcacaagacatttgaagggaacttgacgacg
aagcccatcaatggggccatctttatcttcaatccccgcacggggcagctcttcctgaag
atcatccatacatctgtgtgggcagggcagaaacgattgggccagctggccaagtggaag
acagctgaggaggtggcggccttgatccgatccctgcctgtggaggagcagccaaagcag
ataattgtaacccggaagggcatgttggaccctctggaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagctgcagttacctttccaagcctgcctgaaagtggag
aagtttggagacctcattttgaaggccacagaaccccagatggttctcttcaacctctac
gatgactggctgaagaccatttcttcctacacggcattctcccgtctgattctcattctt
cgggcactgcatgtgaacaatgaccgggcaaaggtaatcttgaagcctgacaagacgacc
atcacagagcctcaccatatctggcccaccttgacagatgaagagtggatcaaagtggag
gtgcaactgaaagatctgatcttggcagattacggcaagaaaaacaatgtgaacgtggct
tctctcacacagtctgagatccgagacatcatcctgggcatggagatctctgctccttcg
cagcagaggcagcagatcgcggagattgagaaacagaccaaggaacagtcacagctgacg
gccactcagacgcggacggtgaataaacacggggatgagatcatcacgtcgaccaccagc
aactacgagacacagaccttctcctccaagacggagtggcgtgtcagggccatttctgca
gcaaacctccacttgcggacaaaccacatctatgtctcgtcagatgacatcaaggagact
ggctacacgtacatcctacctaagaacgttctgaaaaaattcatctgcatttcagacttg
cgtgcacagattgcaggatacctgtatggcgtgagccctcctgataacccccaggtgaag
gagatccgctgcatcgtgatggtgcctcagtggggaactcatcagacagttcacctccct
ggccagctaccccagcatgagtatctcaaggaaatggagcctctgggatggattcatacc
caaccaaatgagtctcctcagctctcacctcaagacgttacgactcatgccaaagtcatg
gctgagaatccctcatgggatggagaaaagactatcatcatcacctgcagcttcacccct
ggctcctgcactttgacggcctacaagctaactcccagtggctacgagtggggcaggcag
aacaccgacaaaggaaacaaccccaaaggctacctgccttctcactacgagcgggtccag
atgctcttgtctgaccgtttcctgggcttcttcatggtgccagcccagggctcctggaac
tacaatttcatgggtgtccgtcatgatcctaacatgaaatatgagctacagttggcaaat
ccaaaggaattctaccacgaggtccatcggccgtcccatttcctcaactttgccctcctc
caggagggcgaggtgtactccgctgatcgagaagacctctatgcctag
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