Eublepharis macularius (Leopard gecko): 129344887
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Entry
129344887 CDS
T09084
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emc03036
]
129344887 (CHD5)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129344887 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
129344887
NCBI-ProteinID:
XP_054857777
UniProt:
A0AA97LLR0
LinkDB
All DBs
Position
17:complement(16116280..16191451)
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AA seq
1984 aa
AA seq
DB search
MRGAEEPELGEDASEEDDGVLEALEDFYPEEPVNPPKKKKPKKLKENKASKIKRKKKEGC
LDDEISENEEELLGEKSDSEGSDYSPNKKKKKKLKEKKEKKAKRKKKEDEEDENEDGGLK
EPKTSAQLMEEWGLDDVDYAFSEEDYHMLTNYKAFSQFLRPLVAKRNPKIPMSKMMTVLG
AKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPAPLSTSMPQPLLPQPAIRKAKTKEG
KGPGVRKKIKSTKDSKKKGKGKKVAGLKFRFGGIANKRKKGSSSEEEEREESDLDSASIH
SSSMRSESSAGLGKKGKRQKKKKRLEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHL
VCLDPELEKAPEGKWSCPHCEKEGIQWEPKDEEDEEEEIGEEEDDHMEFCRICKDGGELL
CCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWIWKEPPAPLLSALA
SADPDLVIPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMD
EPPAFDYGSGDEDGKSEKRKNKDPQYAKMEEKYYRYGIKPEWMMIHRVLNHSFDKKGDVH
YLIKWKDLSYDQCTWEAADINIPDYENFEQQYWDHREMMLGEDTSCPPERLNKERKKLDK
LQRPPETPIVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLG
KTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVI
RENEFSFEDNAIRTGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAH
RLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD
ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKLILTKNFEA
LNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQ
KMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPG
AQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT
RASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMIS
QGQRIGLPEAMTPFTETPVSKGGTVTPSMKKKHGGTPPGDNKEVEDSSVIHYDDAAISKL
LDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLR
HHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEE
RPEGQSGRRQSRRQLKNDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQD
AFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIG
VMSLVRKKVQEFEPVNGKYSTPDLIPEGPDVKKGSEVLSSDPNTPVPASPAHGPLGPMSQ
PEKGDAHLGISEEKEQVEEKIKKPRDVQVSSDGEKIENDEREESAESQAKSGEEKPEEGE
KAEPHSEQPSKDEASQENEKPAEKPEINTSPCKGSSKDSKPDDTKAEEKGQAEAPQNGEK
EDDEDGKKDDKSGIRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAG
IVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLR
RAAYLNMSQEPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEEL
LSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGSDPTVQQASFGSSQIYSNNF
GPNFRGPGPGGIVNYSQMPLGPYVTATPNGPPPSYPDKKIPEPLKEGTALECKGRHHDII
CIED
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggcggaggagccggagctcggcgaggacgcgtcagaagaagatgatggggtg
ctggaagccttggaggacttctatcccgaggagccggtgaaccccccgaagaagaagaaa
cccaagaagctgaaggagaacaaggcttccaaaatcaagcgaaagaagaaggaggggtgc
ctcgatgacgaaatctcagaaaatgaggaggagctgctgggagaaaagtcggacagtgaa
ggcagtgattattcccccaacaaaaagaagaagaagaagctgaaagaaaagaaggagaaa
aaagccaaacggaaaaagaaagaggacgaagaggacgagaatgaagatggaggtttaaag
gagcccaagacctcggctcagctcatggaagagtggggcttagatgatgtagactacgct
ttttctgaagaagactatcacatgctgacgaactacaaggcttttagccagtttcttcga
cctctggttgccaagcggaatcccaaaatcccgatgtccaagatgatgaccgttctggga
gccaagtggcgggagttcagtgccaataaccccttcaaaggcagttcggcagcggcagcg
gcagccgccgtggctgcagctgttgagacggtggccattgctccggcgccactttctacc
agcatgccgcaaccactgctgccccagcctgccatcaggaaagccaaaaccaaggagggc
aaaggtcctggcgtgcggaagaaaattaagagcaccaaagacagcaagaaaaaaggaaaa
gggaagaaagttgctggcctgaaattccgctttggggggattgccaataaaaggaaaaaa
ggctcctcaagcgaagaggaggagcgagaggagtctgacctggacagcgccagcatccac
agctcctccatgcgttcggagtcctcagccggcctgggcaagaagggcaagcggcagaag
aagaaaaaaagacttgaagaaggtgacggttatgagacggaccaccaggattactgcgaa
gtgtgccaacagggtggggaaataattctgtgcgacacgtgtcctcgggcctaccacctt
gtctgtttggacccggagctggagaaggccccggagggaaagtggagctgcccgcactgt
gagaaggaaggcatccagtgggaaccaaaggacgaggaagacgaggaagaggagattggc
gaagaggaagacgaccacatggaattctgccgcatctgtaaagatggaggagagctcctc
tgttgcgacacctgcccgtcctcttaccacctgcactgcctgaacccgccgctgccagaa
atcccaaacggtgaatggctctgcccgcgttgtacatgcccaccgttaaaaggcaaagtc
cagcgaattcttcactggatctggaaggagcccccggccccacttttgtctgccttagcc
tcagcggatcccgacttagtgatccctcctccaaagcctttagaagggatccctgaacga
gaattctttgtgaaatgggctggtctctcctactggcactgctcctgggtcaaagagctg
cagctggagctctaccacactgtgatgtaccgcaactaccaaagaaagaacgacatggat
gagccgccagcttttgattacggctctggagacgaggatggaaaaagcgagaagagaaag
aacaaagaccctcaatatgccaagatggaggagaagtattaccgctacggtatcaagcct
gagtggatgatgattcaccgtgttcttaaccacagttttgacaagaagggagacgtccac
tacctgatcaagtggaaagacctctcctacgaccagtgcacctgggaagccgccgacatc
aatatcccggactatgaaaattttgagcagcaatattgggatcacagggagatgatgttg
ggggaagataccagctgtccacctgaaaggctgaacaaagaaaggaagaagctggacaaa
ctgcaaaggcccccagagacgcccattgtggatcctacggtgaaatttgacaagcaacca
tggtatattgatacaacaggtgggacactgcacccttaccagctggagggcctcaactgg
ctgcggttttcctgggcacaaggaacggatacgatccttgctgatgagatgggccttggc
aagacggtccagaccattgtgttcctctactctctctacaaagagggccactccaaaggt
ccgtatctggtcagcgctcctctctcgacgatcatcaactgggaacgagagtttgagatg
tgggctcctgatttctatgtggtcacatacacaggggataaggagagtcggtctgtgatc
cgcgaaaatgagttctctttcgaggacaatgccatccggactgggaagaaggtgttccgg
atgaaaaaagaagctcaaataaaattccacgtcttgctcacatcctacgagctcatcaca
atcgatcaggccattctgggatctatagagtgggcatgtctggtggttgatgaagcgcat
aggttgaagaacaaccagtccaaattctttagagtgctcaacagctacaaaattgactac
aagctgctactcactgggacgcccctgcagaataacctggaagagctcttccatctgctc
aactttctcacgccagagaggttcaacaacctggaaggattcctggaagagtttgcagat
atatccaaggaagaccagattaaaaaactgcacgaccttttgggccctcacatgttacgg
aggctgaaggctgatgtgtttaagaacatgcctgccaagacagagttgattgtgagggtg
gaactcagtcagatgcagaaaaagtactacaagctcatcctgacgaagaactttgaggcc
ctgaactccaaaggaggtggcaaccaggtgtcgctgctcaacattatgatggatctgaag
aagtgctgcaaccacccgtatcttttccccgtggcagccgtggaagccccagtattaccg
aacgggtcctatgatggcaactcgctggtgaagtcttcggggaagctgatgctgctgcag
aaaatgctgaaaaagctgagagatggaggccatcgggtgctcattttctctcagatgaca
aaaatgctggacttgttggaggatttcttagaattcgaaggttacaagtacgagcggatc
gatggggggattaccggagggctgaggcaggaagccatcgacagattcaatgctcctggg
gctcagcagttctgtttcctgctctctacccgagccggcggtctgggcataaaccttgct
acggccgacacagtcataatttacgattctgattggaatccccacaatgacatccaggcg
ttcagcagagcccaccggatcgggcagaacaagaaagtaatgatctaccgctttgtgaca
agggcctctgtcgaggaacgcatcacccaggtggccaagaggaagatgatgctgacccat
ctggtggtgcgtccaggccttggctccaagtccggctccatgacgaaacaggagctggat
gacatcttgaagtttggaacggaggagctgttcaaggatgacgtagaaggcatgatatct
cagggccagcgaatcggactgcctgaggccatgacccctttcacagagactccagtctct
aaaggagggacggtgactcccagcatgaagaagaaacatggcggcaccccacctggtgac
aacaaagaggtggaggacagcagtgtgatccattacgatgatgcggccatctcgaagctg
ctcgaccgcaaccaggacgccactgatgacacggagcttcagaacatgaacgagtatctc
agctcttttaaagtggcccagtatgttgtgagagaagaggatggtgtggaggaggtggag
cgtgaaatcatcaagcaggaagagaacgtggaccctgattattgggagaaattgttgagg
caccattacgagcaacagcaggaggatttggcccgtaatcttgggaagggcaagagagtc
cgcaaacaagtcaactacaatgatgcatcgcaagaggaccaagagtggcaagatgaactc
tccgacaatcagtcggaatattccattggctccgaagatgaggatgaagactttgaggag
aggccggaaggtcagagtggccggaggcagtcacggagacagttgaagaacgaccgggac
aagcccctcccaccgttattggcaagagtcggtgggaacattgaggtgctggggttcaat
gcccgacagcggaaagctttcttgaacgccatcatgcgctgggggatgcccccgcaagac
gccttcaactcccattggctcgtgcgagacctccgtggaaaaagcgagaaagagttcagg
gcttatgtgtccttgttcatgaggcatctgtgtgaaccaggcgcggacggtgctgagacc
tttgctgacggcgtcccccgcgaggggctgtctcgccagcacgtgctgacacgcatcggt
gtgatgtcactagtaaggaagaaggttcaagagttcgaacccgtcaatgggaagtacagc
actccagatctgatcccagaaggaccagatgtcaagaaaggcagcgaggttctttcttcg
gacccaaatactccggtcccggccagcccagctcatgggccactgggacccatgtcacaa
ccagaaaaaggggatgcacatcttgggatttctgaggagaaggaacaagtggaagagaag
attaaaaagccccgggatgttcaggtgtcatctgatggagagaagattgaaaatgacgaa
agagaggagagtgccgagagccaagcaaaatcaggagaggaaaagccagaagaaggagag
aaggcagaacctcattctgaacagcctagtaaagatgaggcttcccaggagaacgagaag
cctgcagaaaagccggaaataaatactagtccctgtaaagggagctctaaagactccaag
ccagacgacaccaaggcagaagagaaggggcaagcggaggctccacagaatggagaaaag
gaggatgatgaggatggaaagaaggatgacaagagcgggatccggttcatgttcaacatc
gcggatgggggcttcacagagctgcacacgctgtggcagaatgaggagagagctgctgtt
tcctcggggaagatttatgacatctggcaccggaggcacgattactggctcttggcagga
atcgtcacccatggctatgctcgctggcaagatatccagaacgatccccgttacgtcatc
ctcaacgagccattcaagtcggaaatccacaagggcaactacctggagatgaagaacaag
ttcctggctcggcgattcaagttgctggagcaggcgttggtgatcgaggaacagctgcgc
agggccgcgtacctcaacatgagccaagagcccaatcatccggccatggccctgaatgcc
cgcctggccgaagtggagtgccttgccgagagccaccagcatctctccaaagaatctctg
gctgggaacaagcctgccaatgctgtccttcataaagtcctaaaccagctggaagagctg
ctgagcgacatgaaagcagatgtgactcgcttgccctccatgttgtcccggatcccgcct
gtcgctgctcgcctgcagatgtctgaacggagcatcctgagccgcctgacgaaccgagga
agcgatcccacagtccagcaggcatcttttggctcctcccagatctacagcaacaacttt
ggaccaaatttccgaggtccaggaccaggtggaattgttaactacagccagatgcccctg
ggaccttatgtgactgcgacacccaatgggccacccccgagctaccctgataaaaagata
cccgaaccgctgaaagaaggcacagccttagaatgtaaaggacggcatcatgatatcatc
tgcatcgaagattaa
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