Eublepharis macularius (Leopard gecko): 129344894
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Entry
129344894 CDS
T09084
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129344894 (TRIM50)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129344894 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Trimer_CC
zf-Nse
ATG17_like
zf-RING_4
Sina_RING
Dynactin_p22
U-box
CorA
zf-RING_6
Rep_trans
Exonuc_VII_L
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
129344894
NCBI-ProteinID:
XP_054857784
UniProt:
A0AA97KN10
LinkDB
All DBs
Position
17:18713395..18722292
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AA seq
497 aa
AA seq
DB search
MARKMSINELEDQLLCPICLEIFKEPLMLQCGHSYCKSCVVALSGDLETQFLCPVCRKAV
DCSSSPPNVNLARIIEALHAVSNSDPNEESCPDHRNPLSLFCEQDREVICGLCGTIGTHQ
QHKVMPVSTVYSRMKEELAALITVVQQQKRSLDEHISKLMNNKTRITNESDVFKRVIWKQ
FQELHRYIDEEKANFLEQAERQAAHLIASIEVQVKQTANALQKLKELERSLEKLNNEGHL
DFIRKYGSLPSRSKLPRQHPADGTFSAVSFNPGFHQDDIKMTVWKRLLRKILPAPEMLKL
DPVSAHPILELTKGNTVVQCGNLLFQRRDSNPDRFDYSNCILANKGFSWGKHYWEIIVGT
KSHWRLGIVKASVSRKGKLSRSPEHGAWLIGLKDGKVYEAFNSPRVVLPLLAHPQRIGVY
LHYEKGELTFYNADSPDELVAIYTFHAEFQGKLYPILDLCWHERGTNSLPIVLPTPTVAQ
DSWAQDSSSEFQEPTKL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagatgagcattaatgagctggaggaccagctgctgtgtcccatttgcttg
gaaatcttcaaggagccgctgatgctccagtgcggacactcctattgcaagtcctgcgta
gtggccctctcgggtgacttggaaactcaattcttgtgccctgtgtgccggaaagctgtg
gattgcagcagttccccgcccaacgtgaatttggcccgcatcatcgaggcgctgcacgcc
gtcagcaactcggatcccaatgaggaatcctgtcctgaccatcggaaccccctcagtctc
ttctgcgagcaagaccgggaggtgatctgtgggctgtgtggcaccattggcacccaccag
caacacaaagtcatgcccgtctccactgtctacagccggatgaaggaagaactcgctgca
ttgataactgtagtacaacagcaaaaaaggagcctggatgagcacatcagcaagttgatg
aacaacaaaactcgcatcacgaacgagtcagacgtcttcaaacgtgtgatttggaagcag
ttccaggagttgcacaggtacattgacgaagagaaggccaacttcctggagcaggctgag
agacaggcagcccacctcattgcctccatcgaggtccaggtgaagcagacggcaaacgcc
ctgcagaagttgaaggaactggagaggtccttggagaaactcaacaacgaaggccatctg
gatttcatcaggaaatacggatctctaccctcaaggtccaagctccctcgccagcaccca
gccgatggcacattcagtgcagtctcttttaatcccggcttccaccaagacgacatcaag
atgaccgtgtggaagcgtctgctacgcaaaatcctaccagctccagagatgctgaagctt
gaccccgtgagtgcgcatcccatcctagagctgaccaaggggaacaccgtggtgcagtgt
gggaatctactcttccagcggcgggacagcaaccctgaccgcttcgactacagcaactgc
atcctagccaacaaagggttttcatggggaaagcactactgggagattatcgtgggcacc
aagagccactggcgcctggggatcgtcaaggcttcggtcagccgcaaaggcaagctgagc
cgaagcccagagcatggggcgtggctcattggtttgaaggacggcaaggtctacgaggcc
ttcaacagcccccgagtggtgctgccgcttctggctcacccccagcgcattggggtgtac
ctgcactacgaaaagggcgagctgaccttctacaatgcggacagtcctgacgagctagtg
gccatctatactttccatgcagagttccagggcaagttgtacccgatcctggacttgtgc
tggcacgaacggggcaccaacagcctgcccattgtactgcctactcccactgtggcacag
gattcctgggcccaagacagcagctcagaattccaagagcctactaagctatag
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