Eublepharis macularius (Leopard gecko): 129344919
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Entry
129344919 CDS
T09084
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129344919 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129344919 (SCARF1)
Membrane trafficking [BR:
emc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
129344919 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
129344919
NCBI-ProteinID:
XP_054857809
UniProt:
A0AA97LJK8
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All DBs
Position
17:complement(27280108..27291000)
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AA seq
824 aa
AA seq
DB search
MEPLSFLVLFLLVQGLGIGSFASELDPNGKHVCRSDSHSHVLTCCPGWKQEGRECTLALC
EGAAACQEDEVCVRPGFCRCKPGFFGASCNTRCPDEYWGPDCKENCLCFPNGKCDPASGE
CTCHPGRWGALCQFACQCGPHGHCNPTTGACHCKPGWWAPDCKKQCLCNLAGSRCDPATG
RCICDQGWWGRKCSSPCHCNHSPCAQESGRCECRAGLWGASCQHQCQCVHGTCSPQDGQC
LCDAGYQGQRCTDPCPAGTFGPQCRYNCGHCKQEQPCSPVDGFCLACDSGWNGTRCNQPC
PPGHYGENCAQLCPRCHRGETCHPKTGECRNCEPGLRGARCELPCPPGLFGKGCQLVCPS
CFNGSCDPVSGMCVCQAGYWGASCNQTCLEGFYGPNCSELCQCPWGPCHPSSGDCQWRGK
RQEVLLVGILVPLLLLLLLCICCCFCCRSAPVATNGRVAAADGDPVSQVKLHVQGALANL
RSSFPCFSLGGYKLPRVTVSHHDAEIPFNPSFLESPSAAWPIDSSFSDTDEEEDTACHLP
TKEGRVVCNAPDVEPQPGLLPEVSALNLESFVIPRTSSIAKAKRPSVSFAEGTCFGPQSA
RSSTETLHLSQKPKTMRSVSQVALLHQPGPGREQGNLAECCYENLEASSRMEEGHRPSPR
STPGGPRKRISNSRHVAQRVEALEAALSAQGKESCITTIYVTVGKGEGRGKGPEQAALQQ
SEGPKLGRSIEGLQMPPGRTPDSDKGTRGPLSQGKPDPESKFSEAEAQGLLGSLPAAACE
EAAQNKRPSQSHSQTEVEAGASNEEAQEPKYENVSGLIQLPIAS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggagccgctgtccttcttggttctctttttgctggtccagggactgggaattgggagt
ttcgcctctgagctggaccccaacgggaagcatgtctgcaggtcagacagccattcccac
gtccttacctgttgccctggctggaagcaagagggccgagagtgcacacttgctctgtgc
gaaggagctgctgcctgccaagaagacgaggtgtgtgtgagacccggtttttgccgctgc
aagcccggcttctttggggccagctgtaatacacgttgccctgatgaatactggggcccc
gactgcaaagagaactgcctttgctttcccaatgggaagtgtgaccctgccagtggagaa
tgcacctgccacccaggccgctggggggcactctgccagtttgcctgccagtgtggcccc
catggccactgcaaccccaccactggagcctgccactgcaagccaggctggtgggcacca
gactgcaagaagcaatgcctgtgcaacctggctggctctcgctgtgatccagctactggt
cggtgcatctgcgaccaaggatggtggggcaggaagtgctcctctccctgccactgcaac
cactccccctgtgcccaagaatctggccggtgcgagtgccgggcagggctatggggtgca
tcctgccagcaccagtgccagtgcgtgcatgggacctgcagcccccaagatggacagtgc
ctctgtgatgccggctaccagggccagagatgtacggacccctgtcctgctgggaccttt
gggccacagtgcagatacaactgtggccactgcaaacaggaacagccctgctctccagta
gacggcttctgcctggcctgtgactctggctggaatggaacccgctgcaatcagccgtgc
ccaccagggcactatggggaaaactgtgcccaactctgcccacgctgccatcggggggag
acttgtcaccccaaaacaggggaatgtcggaactgtgaaccaggcctcagaggtgccagg
tgtgagctgccctgcccccctggcctgtttggcaagggctgccaacttgtctgtccaagc
tgcttcaacgggagctgtgatccagtgtccgggatgtgtgtgtgccaggctgggtactgg
ggcgctagctgcaaccagacctgcctggaaggattttatgggcccaactgctctgagctc
tgccagtgcccctggggcccgtgccacccatcttctggggactgtcagtggagaggcaag
aggcaagaagtccttctcgtgggcatcctggtcccattgttgctgctgctcctgctctgc
atttgctgctgcttctgctgcagatcggctccagtggccaccaatggcagggtggcagct
gctgatggggacccagtctcccaggtgaagcttcacgtgcagggggcgctggccaacctc
cgctccagctttccctgcttctctttggggggctacaagcttccacgggtgacagtctcc
caccacgacgcagagatccccttcaaccccagcttccttgagtccccatctgctgcctgg
cccattgacagctctttctccgacacagatgaggaggaagatacagcctgccacctccct
accaaggaaggaagagttgtgtgtaatgctccagatgttgagccacagccgggcctcctc
cccgaggtgtcagccttgaatttggagtcctttgtcatccctcgcacatccagcattgcc
aaagccaagagaccctctgtgtcctttgcagaaggcacctgctttggcccgcagagtgcc
agaagctccacggaaaccctccacctctcacagaagccgaagacgatgcggagcgtctcc
caagtggccttgcttcaccagcctggcccgggccgtgaacagggcaatttggcagagtgc
tgttacgagaacttggaggctagctcacggatggaggagggccacaggccatctccacgg
agcaccccaggtggccccaggaaacggatctccaactcccggcacgtggcgcagcgagtg
gaagctctggaggcggccttgtcagctcaaggcaaagagtcgtgcatcaccaccatttat
gtgacggtgggcaaaggggaagggaggggcaaagggccggagcaggctgccctgcaacag
agtgaggggcccaagcttgggcgaagcatcgagggcctccagatgccccctgggaggaca
ccagactcagacaaaggtactagggggccgctgtcccaaggcaagcctgacccggaatcc
aagttttccgaggctgaggcccagggtcttctgggaagcctgccagctgctgcctgtgaa
gaggctgcccagaacaagcgccctagccaaagccacagccagacggaggtggaagcaggt
gcctccaacgaggaggcccaggagccgaagtatgagaatgtctctgggttgatccagctt
cccatagcttcctaa
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