Exiguobacterium mexicanum: ACNOIU_00025
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Entry
ACNOIU_00025 CDS
T11248
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
emex Exiguobacterium mexicanum
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emex03032
]
ACNOIU_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
emex03400
]
ACNOIU_00025 (gyrB)
Enzymes [BR:
emex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACNOIU_00025 (gyrB)
DNA replication proteins [BR:
emex03032
]
Prokaryotic type
DNA Topoisomerases
ACNOIU_00025 (gyrB)
DNA repair and recombination proteins [BR:
emex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACNOIU_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XPL66616
LinkDB
All DBs
Position
4236..6164
Genome browser
AA seq
642 aa
AA seq
DB search
MSNENEKQMQDYGADQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAG
HCDTITMTVEPGNSIVVEDNGRGIPVDVQKKTGRPAVEVIFTVLHAGGKFGGGGYKVSGG
LHGVGASVVNALSTKLEVFVRRNGNVYYQSFKRGVPQGELEIVGTTDTTGTTVRFFPDGD
IFEETLEYDFDLLATRLRELAFLNKGLRIVAKDERSDETIERNYHYEGGIKSYVEHLNRS
KASIHDEPVYVHGTKDGIEVEIALQYNEGFASNIYSFTNNIPTHEGGTHETGFKTALTRS
INDYAKRFGLMKEADGSLSGDDVREGLTAIVSVKHPSPQFEGQTKTKLGNADARTATDSL
FTDTFEQFLLENPSVGRLIVDKGLMAARARLAAKRAREMTRRKGILEVSSLPGKLADCSS
KDASKSELYIVEGDSAGGSAKSGRDRHFQAILPIRGKIINVEKARLDKILANQEVRTIIT
ALGTGIAEEFDLGKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMRPLVESGYVYIAQPP
LYGLKHGKDVTYVQNDRELQEAIKQLPENARYSVQRYKGLGEMDPEQLWSTTMNPETRSM
LRVDLQDAIEADEIFETLMGDNVEPRRDFIQSHAHYVKNLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaaaacgaaaaacaaatgcaagattatggtgctgatcagattcaagtgctt
gaagggttagaagccgttcgtaaacgcccggggatgtatatcggttcaacgagctcacga
ggactccaccacttggtgtgggaaatcgtcgacaactcgattgatgaagcgctcgccgga
cactgtgacacgatcacgatgacagtagaaccaggcaactcgattgttgtcgaagataac
ggacgcgggattccagtcgatgttcaaaagaaaacgggccgtcctgccgtcgaagtcatc
ttcaccgttcttcacgccggaggtaagtttggcggcggcggatacaaagtttcaggcggt
ctgcacggtgtcggggcctcggtcgtcaacgcgttgtcgacgaagcttgaagtgttcgtc
cgtcgtaacggcaacgtctactatcagtcattcaaacgcggtgtcccacaaggcgaactt
gaaatcgtcggtacgaccgatacgactggtacaactgtccgtttcttcccggatggggat
atcttcgaagagacgctcgaatatgactttgatttactcgccacacgtttgcgcgaactt
gccttcctgaataaaggactccgcatcgtcgccaaagacgagcgcagcgatgagacgatt
gaacgcaattatcactacgagggtggaatcaagtcatacgttgaacatttgaaccgctcg
aaagcctcaatccacgacgagcctgtctacgtacatggcacgaaggatggaattgaagtc
gagattgcgcttcagtacaacgaaggatttgcgagcaacatctattcattcacgaacaat
attccgacccatgagggcggaacgcacgagactggatttaaaacggcgctcacacgttca
atcaacgactatgcaaaacgcttcggtctcatgaaagaggctgatggtagcttgtcaggg
gatgacgtacgtgaaggattgacggcgattgtctcggtcaaacacccgtcaccacagttc
gaagggcagacgaagacgaaacttggtaacgcagatgcacgtacagccacagactcgctc
ttcacagacacgttcgagcaattcttgcttgaaaatccatctgtcggtcgattgatcgtc
gacaaaggcttaatggcggcccgtgcccgtctcgcagcgaaacgcgctcgtgagatgaca
cgccgtaaaggaatccttgaagtcagttcattgcctgggaaactagccgactgttcatcg
aaagatgcatcgaagtctgaactgtacatcgttgagggtgactcggccggtggttcagcg
aagtcaggccgtgatcgtcatttccaagcgattttgccgatccgcggtaaaatcatcaac
gtcgaaaaagcgagacttgataagattttggccaaccaagaagtacgtacgattattaca
gcgctcgggacagggattgcggaagagttcgatctcgggaaggctcgttatcataagtta
attatcatgaccgatgccgacgtcgatggagcccacattcgtacactgctcttgacgttc
ttctatcgctacatgcgtccgctcgtcgagagcgggtatgtctatatcgcgcaaccacca
ctttacggcttgaagcacgggaaagacgtcacttacgtgcagaacgaccgtgaactgcaa
gaagcgattaaacagcttccggaaaatgctcgttacagcgttcagcgttacaaaggtctc
ggtgagatggaccctgaacaactgtggagcacgacgatgaatccagagacacgctcgatg
cttcgtgtcgaccttcaagacgccattgaggcggatgagatctttgagacgctcatgggt
gacaatgtcgagccgcgacgtgatttcatccaatcacatgcgcattacgtgaaaaacctc
gatatttaa
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