Exiguobacterium mexicanum: ACNOIU_05830
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Entry
ACNOIU_05830 CDS
T11248
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
emex Exiguobacterium mexicanum
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emex03019
]
ACNOIU_05830
03009 Ribosome biogenesis [BR:
emex03009
]
ACNOIU_05830
Enzymes [BR:
emex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACNOIU_05830
Messenger RNA biogenesis [BR:
emex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACNOIU_05830
Ribosome biogenesis [BR:
emex03009
]
Prokaryotic type
rRNA helicases
ACNOIU_05830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XPL67683
LinkDB
All DBs
Position
1118534..1119886
Genome browser
AA seq
450 aa
AA seq
DB search
MYRLNSFQQFKLLPFIVDALTEKRITVPTDIQARIIPAAMNGRDIIGKSQTGTGKTLAFL
LPILEAIDPKEESVQAIVVAPTRELAWQIHEELKTLLVKQPDYIKTSLIVGGTDRERQID
KMKNPPQLIIGTPGRLLDLMKVQALFPHKVTHFVVDEADQMLDMGFLPEVDRIAQALPEK
LQTMVFSATIPEKLQPFLKKYLHDPRYAEASEEHRVVPKIKHHVIPVRHRDRKALTVEIA
KTINPFVCLVFTNTKQDADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQFVI
ATDLAARGIDIKGVSHVINFGIPKDLDFYTHRVGRTGRAGETGEAYTLYEDHENGPINRL
EERGFTFKHVDVRNGSLQEIKTRKRRTTDRKMKVSQTAHSRMAGEIKKAKKKVKPGYKKK
FKYKLKETASREHMQSQRKERREVRKKNRR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcgattgaacagcttccaacagttcaaattgttaccgtttatcgtcgatgccttg
acagaaaagcgcatcacagtaccgacggacattcaggcccggattatcccggctgccatg
aatggccgcgatatcattgggaaatcacaaaccggaacggggaagacgcttgcgttcctc
ttacctattttagaagcaatcgatccgaaagaagaatcggtccaagccatcgtcgtcgca
ccgacgcgcgaactcgcttggcagattcacgaagagttgaaaacactcctcgtcaaacag
ccggactatattaagacaagtctgattgtcggaggaactgaccgggaacgacaaatcgac
aagatgaaaaacccaccacaactgatcatcgggacaccaggtcgtttgctcgacttgatg
aaagtccaagcgttattcccgcacaaagtcacgcacttcgtcgtcgatgaagctgaccaa
atgctcgacatgggcttcttgcctgaagtcgaccgtatcgcgcaggcgttgccagaaaaa
cttcaaacgatggtcttctcagcgacaatccctgagaagttacagccgttcttgaagaaa
tacttgcacgacccacgctacgcggaagcgagtgaagagcaccgtgtcgttccgaaaatc
aagcatcacgtcatcccggtacgtcaccgtgaccgtaaggcgttgacggtcgaaatcgcc
aaaacgattaacccgttcgtctgtctcgtgttcacgaacacgaaacaggatgcagatgag
ttggagacttcgttccgcgaggcgggactcaacgtcggcacgcttcatggggacatgcaa
gctcgtcgccgcaagcaagccatcaaagacataaacgacgcgaaatatcagttcgtgatt
gccaccgacttagcagcgcgcggcatcgatattaaaggtgtatcgcacgtcatcaacttc
ggaattccgaaagacctcgacttctatacgcaccgtgtcggccggacgggccgcgccggt
gagacgggcgaagcgtacacgttatatgaagatcacgagaacggtcccatcaatcgactc
gaagagcgtggtttcacgttcaagcacgtcgatgtgaggaacggatcgctccaagagatt
aagacgcgcaaacgccgcacgaccgaccggaagatgaaagtctcgcaaacggcgcacagc
cggatggcgggcgaaatcaagaaggcgaagaaaaaggtcaagcctggttacaagaagaag
ttcaagtataagttgaaagagacggcctcacgtgagcatatgcagagccaacgtaaggaa
cgtcgcgaagttcgtaagaagaaccgtcgctaa
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