Exiguobacterium mexicanum: ACNOIU_06605
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Entry
ACNOIU_06605 CDS
T11248
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
emex Exiguobacterium mexicanum
Pathway
emex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNOIU_06605 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emex03019
]
ACNOIU_06605 (rny)
Messenger RNA biogenesis [BR:
emex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACNOIU_06605 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
V-ATPase_G
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-ProteinID:
XPL67829
LinkDB
All DBs
Position
1259605..1261167
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AA seq
520 aa
AA seq
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MMEWLLELILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQARQQSEAMQKEARL
EVKEEMIQLRNETEQELRERREEQKVKENRFVQKEELLDRKADMLERKEDALDEREAALA
KRKREAETLESKVEELYEEARQELVRVAALSKEEARTIIMDEAKQEALHDAALLQKEIEQ
KAKLEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIR
EYGEEATFSAGIHGVHPDLVKTLGRMRYRTSYGQNVLAHSVEVAHLAGMMAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDVEATSTIAVLV
AAADALSAARPGARQETLESYIRRLERLEAICESFEGVEKSYAIQAGREVRIIVRPDVVD
DVVANKMARDICKRIEDELDYPGQIKVTVIRETRAVDYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatggctattagagcttattctgatcctccttttgccgatagcttttgttgca
ggtttttttgtgcgtaaatcgatcgccgaagcgaagattcaaggtgccgagacggaagcg
accaagattgtagagcaagcgcgacaacaatcggaagcgatgcaaaaagaagcacggctt
gaagtaaaagaagagatgattcaacttcgcaatgaaaccgaacaagaattgcgcgaacga
cgtgaagagcagaaagtgaaagaaaatcgtttcgtccaaaaggaagagcttctcgaccgg
aaagcagacatgcttgaacggaaagaagacgccttggatgaacgtgaggctgcactcgcg
aaacggaagcgtgaagcggaaacgctcgagagcaaagtggaggaattatatgaggaggca
cgccaagaactagtacgcgtggcagccttgtcgaaagaagaagcacggaccatcatcatg
gacgaagcgaagcaggaagcgcttcacgatgctgctctccttcaaaaagaaatcgagcaa
aaagcaaaattagaagctgataaaaaagcgaaacacctcttgtctctcacgatgcaacgt
tatgcggccgaacacgtcgccgagacgaccgtatcagtcgtcaacttgccgagtgatgag
atgaaagggcggattatcggacgtgaaggacgtaacatccgcacgctcgagacactcacc
ggcatcgacctcatcatcgatgacacgccggaagcggtcatcctgtctggatttgacccg
gtccgtcgtgaaatcgccaagatgacgctcgaaaaactcgttcaagacggtcggatccat
ccggcccgcatcgaagagatggtcgagaaatcacgtcgtgaagtcgatgaacgcatccgt
gaatacggggaagaagcgacattctcagccggcatccacggagtccacccggacctcgtc
aagacgctcggtcgaatgcgttaccggacgagttacggtcaaaacgtgctcgcccactcg
gtcgaagtggcccacctcgccggcatgatggccgccgagctcggggaagacgtcacgctc
gccaagcgagcgggtctcctccacgatatcgggaaagccatcgaccatgaagtcgaaggc
agccacgtcgagatcggtgtcgagctcgccacgaagtacaaagagcatccggtcgtcatc
aactcgatcgcctcgcaccatggggacgtcgaagcgacatcgacgatcgcggttctcgtc
gcagcggctgacgccttgtcagcggcgcgtccaggagcccgtcaagagacgctcgaaagc
tatatccgacgcctggagcgcctcgaagcgatctgtgagtcgttcgaaggcgtcgagaag
tcatatgccatccaagcgggacgtgaagtccggatcatcgtccgcccagacgtcgtcgat
gacgtcgtggcgaacaagatggcccgtgacatctgtaaacggatcgaagatgagcttgac
tatccaggccaaatcaaagtgacggtcattcgcgaaacgcgtgccgtcgattatgcgaag
taa
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