Exiguobacterium mexicanum: ACNOIU_08500
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Entry
ACNOIU_08500 CDS
T11248
Name
(GenBank) DNA-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
emex Exiguobacterium mexicanum
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emex03019
]
ACNOIU_08500
Messenger RNA biogenesis [BR:
emex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACNOIU_08500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XPL65310
LinkDB
All DBs
Position
complement(1615881..1617059)
Genome browser
AA seq
392 aa
AA seq
DB search
MNYYQQIDPITGSGFDRTRFQLPTVEKASTRLTDLTDGTPVQTKALVSTVEVREGKSGAK
WLQLNLTTSSGLIRAKQWLRGNEEQLLPIYESGVIELEGKIDVYPKPDGAKSITIDRAKP
IARDEAVSLLPGLPGDETMEQYADELFAILSTLSPDYQAIAMSLLDRYWDDFVLAPAALY
HHHNYVGGLLKHTVCMLRLGYRIQEQDDHLAMAFRVIKEAEQLHKVDVWNTMNGVKVEQA
FRGTFESLYAACEAIAELKEPLRWDELALGILFHDIGKLFEYSHLLSSPNRFEQLFSVKG
TSETTGISINPMGSFIGHMPYGGLLFEKSQQAASVTLSLDAHHRIWHMILSHHGKREWGS
SVLPVTTEAWMLHLIDLLDARYEKWARVHENL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattaccaacagattgatccgatcacggggagcggcttcgaccggacgcggttc
caactcccgaccgtcgaaaaagcgtcgacgcgattgactgaccttacggacgggacaccg
gtccagacgaaagcgctcgtcagtacagtcgaagtgagagaaggcaaatcgggtgccaaa
tggctgcaactgaatttgacgacatcgagcggacttatccgtgccaagcaatggttgcgt
ggcaacgaagagcagttgttaccgatttacgagtctggtgtgatcgagcttgaagggaaa
atcgacgtctatccgaaaccggacggcgccaagtcgatcacaatcgaccgggccaaaccg
attgcccgggacgaggcagtctcattgttgccaggtcttcctggagacgagacgatggaa
caatacgccgatgagctgttcgcgattctgtcgacgctctcgcctgactatcaagcgatt
gcgatgtcgctactcgaccgctattgggacgatttcgtactcgcaccggctgcactgtat
catcatcataactatgtcggcggcctcttgaagcatacggtctgtatgcttcgactcggt
tatcgcatccaagaacaggacgaccatttggcgatggcgttccgggtcatcaaagaagcc
gagcagttgcacaaagtagacgtatggaatacgatgaacggtgtaaaagttgaacaggcg
ttccggggcacgttcgagtcgctttacgcggcctgcgaggccatcgcggaattgaaggag
ccgctccgttgggacgaactcgcgctcgggattttattccatgatatcggcaagttgttc
gagtacagtcacttgctgtcgtccccgaatcggttcgagcaactgttctcggtcaaaggt
acaagtgagacgaccggcatctcgatcaatccgatgggaagcttcatcggacatatgcca
tacggcggactgttgttcgagaagagtcaacaggccgcaagtgtcacattgtcgctcgac
gcccatcatcggatttggcatatgattttatcccaccacggcaagcgcgagtggggatcg
agcgtgttaccggtcacgacagaagcgtggatgctacatttgatcgacttgctggatgcg
cgctatgagaaatgggcgcgggtccacgaaaatttataa
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