Exiguobacterium mexicanum: ACNOIU_09190
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Entry
ACNOIU_09190 CDS
T11248
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
emex Exiguobacterium mexicanum
Pathway
emex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNOIU_09190 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emex03019
]
ACNOIU_09190 (pnp)
03016 Transfer RNA biogenesis [BR:
emex03016
]
ACNOIU_09190 (pnp)
Enzymes [BR:
emex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACNOIU_09190 (pnp)
Messenger RNA biogenesis [BR:
emex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACNOIU_09190 (pnp)
Transfer RNA biogenesis [BR:
emex03016
]
Prokaryotic type
tRNA degradation factors
ACNOIU_09190 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XPL65439
LinkDB
All DBs
Position
complement(1745573..1747789)
Genome browser
AA seq
738 aa
AA seq
DB search
MLGTKQVFSTEWGGRPLSVEVGQLAKQANGSALVRYGDTVVLATVTASKAPKDLDFFPLT
VNYEEKLYSVGKIPGGFLRREGRPGENAILTSRLIDRPIRPLFPDGFRHDIQVMIYVMSN
DPDCPAEMAGMLGTSIALSISDIPFDGPIAGATVGRVNGEFVVNPTTAQLEQTDLELQVA
GTATAINMVEAGANEVPEDVMLESILFGHEEIKKLVAFQTEIVEAVGKPKFEYTVSKFDD
ALTAELEAARPEINAAVQVEEKHARDAAINEVIAKYVAIYEERLVDEPAKLKEVSGILNK
FVKDEVRRLITVDKVRPDGRRPEVIRPLASETGLLPRAHGVGLFTRGQTQVMSVATLGVI
GDAQIIDGIGLEENKRFMHHYNFPPFSVGEARPVRAPGRREIGHGALGERALLPVIPKEA
DFPYTIRLVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLIMEGEHYTVLT
DIQGLEDHLGDMDFKVAGTKDGITALQMDIKIAGITREILEEALEQARSGRLHILNHMLE
TLDAPRPQLSKYAPKIVTMTINPDKIRDVIGPGGKMINSIIDQTGVKIDIEQDGTVFIAS
TDQDGIDMAMALIGDIVREVVVGEEFDATVRRIEKFGAFVELFKGKDALVHVSEFSLERV
ANVEDVVKLGDTIKVRVTEIDDKGRVNASHKVLIFEGLSPEEREAYEAKRKAQRESRPPR
DSRPPRRDGDRRPPRSTN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtacgaaacaagtattttctacagaatggggcgggcgtccgctgtctgtagaa
gtcgggcaacttgcgaaacaagcaaacggctcggcactcgtccgttatggggacacggtc
gtgctcgccacggtcacagcatcgaaagcgccgaaggatttagatttcttcccgctcacg
gtcaactatgaagaaaaattatactcggtcggtaaaattccaggaggtttcctccgtcgg
gaaggtcgtcctggggagaacgcgattttgacatcgcgcctcatcgaccgtccgatccgt
ccgcttttcccggatggcttccgtcatgatatccaagtgatgatttacgtcatgtcgaac
gacccggactgcccagctgagatggccggcatgctcggaacgtcaatcgcactctcgatt
tcagacatcccgttcgatggcccgatcgccggtgcgacagtcggacgcgtcaacggtgag
ttcgtcgtcaacccgacgacggctcagctcgaacagacagacctcgaactccaagtcgcc
ggaacggcaactgcaatcaacatggttgaagcaggcgccaacgaagtaccggaagacgtc
atgctcgagtcaatcttgttcggtcatgaagagatcaagaaattggtcgctttccaaacg
gaaatcgtcgaagctgtcgggaaaccgaagttcgaatacacggtatcgaagtttgatgac
gccttgacggctgagcttgaagcagctcgtccagaaatcaacgctgcagttcaagtcgaa
gagaagcatgcgcgtgacgcagcaatcaacgaagtgattgccaagtacgtcgccatctac
gaagagcgcctcgtcgacgagccggccaagttgaaagaagtgtctggcatcttgaacaaa
tttgtcaaagatgaagttcgccgtctcatcacggtcgataaagttcgtccggacggtcgt
cgcccggaagtcatccgtccacttgcgtcggaaacgggcttattgccacgcgcccacggc
gttgggttgttcacacgtggacaaacacaagtcatgtcggtggcgacactcggcgtcatc
ggagatgctcaaatcatcgacggcatcggtctcgaagagaacaagcgcttcatgcaccat
tacaacttcccgccgttctcggtcggagaagctcgtccggtgcgtgcgccaggtcgtcgt
gaaatcggtcacggtgccctcggagaacgtgcgttgctcccggtcatcccgaaagaagcc
gacttcccgtacacgattcgtctcgtctcagaagtactcgagtcgaacggttcaagttca
caggcgtcaatctgtggctcgacactcgctctcatggatgcaggggttccaattaaggca
ccggttgccgggattgcgatgggtctcatcatggaaggcgaacattacacggttctcacg
gacatccaaggactcgaagatcacctcggtgacatggacttcaaagtcgctggaacgaaa
gacgggatcacggcgctccaaatggatatcaaaatcgccggaatcacgcgtgagattttg
gaagaggcactcgaacaagcacgttcaggccgtctccacatcttgaaccatatgcttgag
acgctcgatgcaccgcgtccgcagttgtcgaagtatgcaccgaaaatcgtgacgatgacg
atcaatccggataagatccgcgatgtgattggaccgggcgggaagatgattaacagcatc
atcgaccaaacgggcgtcaaaatcgatatcgagcaagacggaacggtcttcatcgcgtcg
accgatcaagatggcatcgatatggcgatggccctcatcggcgacatcgtccgtgaagtc
gtcgtcggcgaagagttcgatgcaacggtccgccgcatcgagaagttcggtgcgttcgtc
gaattgttcaaagggaaagacgcgctcgtccacgtctctgagttcagcttagagcgtgtc
gcgaacgtcgaagacgtcgttaaactcggcgatacaatcaaagtccgtgtgacagagatt
gacgacaaaggccgagttaatgcctcacacaaagtgctcatctttgaaggattgtcaccg
gaagaacgtgaagcatacgaagcaaaacgtaaagcgcagcgcgaaagccgtccaccacgt
gacagccgtccgccgcgtcgtgacggagaccgtcgtccgccacgctcgacaaactaa
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