Exiguobacterium mexicanum: ACNOIU_12830
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Entry
ACNOIU_12830 CDS
T11248
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
emex Exiguobacterium mexicanum
Pathway
emex03420
Nucleotide excision repair
emex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACNOIU_12830 (pcrA)
03430 Mismatch repair
ACNOIU_12830 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emex03400
]
ACNOIU_12830 (pcrA)
Enzymes [BR:
emex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACNOIU_12830 (pcrA)
DNA repair and recombination proteins [BR:
emex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACNOIU_12830 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ACNOIU_12830 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XPL66124
LinkDB
All DBs
Position
complement(2452908..2455124)
Genome browser
AA seq
738 aa
AA seq
DB search
MYNLSEELVKGMNPPQAEAVKYTDGPLLIMAGAGSGKTRVLTHRVAYLMASKQIAPWNIL
AITFTNKAAREMKDRIARLVGGVADDIWISTFHSMCVRILRRDIDRIRYDRNFSILDSSD
QLTAIKQVLKELNLDPKKYEPRTLLGMISNHKNELRTPQDAAALVGNNPYEKVISDVYTA
YEKKLKQNNVLDFDDLIMKAIQLFQEAPDVLAFYQKKFQYIHVDEYQDTNRAQYTLVKLL
AQAHENLCVVGDSDQSIYRWRGADIANILTFEKDYPSAHVILLEQNYRSTKRILEAANGV
IQNNSGRKDKQLWTENVEGEKLLLHVASDDRDEAFFIINQMKELRQEGIDYGEMAVLYRT
NAQSRGLEEMLLKSNIPYKMVGGTKFYERKEIKDILAYLRLIANPDEDISFVRVVNEPKR
GIGAATVDKLGDFAGMQGVSLMEAIRDIELSGIAPRTATKLAEFRQLMVDLRQMADYLSI
SELIEEVLKKSGYEEMLKIEKTLEAESRLENLQEFLSVAQNFEKESDEQTLVAFLTDLTL
VSDLDTLEEVDELHQVTLMTLHSAKGLEFPVVFLIGMEEGLFPHSRALNDPEEMEEERRL
AYVGITRAEKRLYLTRAQSRMLYGRFQNNPESRFLHELPETLLERSGKAKKPMPWNPVES
PGKLPVNGFSSKPKPKLAQSSGAESIGWNVGDKANHKKWGQGTVVQTRGEGDQLELDIAF
PAVGIKRLLAKFAPIEKA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtataacttgagtgaagaattagtcaaaggcatgaaccctccgcaagcggaggcggtc
aaatatacggacggcccgttgctcatcatggccggagcagggtctgggaaaacacgtgtc
ttgacgcatcgcgtcgcctacttgatggcgtcgaaacaaatcgcgccgtggaacattctc
gccattacgttcacgaacaaagcggcccgcgagatgaaagaccggatcgcccgcctcgtc
ggtggcgtcgcggacgatatttggatttcaacgttccactcgatgtgcgtccggatttta
cggcgcgacatcgaccgcatccgttatgaccggaacttctcgattctcgactcgtccgat
cagttgacggccatcaaacaagtgcttaaagagttgaaccttgatccgaaaaaatatgag
ccgcggacgctcctcggtatgatctcgaaccataagaacgagctccgcactccacaagac
gcggccgcactcgtcggcaacaacccgtacgagaaagtcatctcggacgtctacacggcg
tatgagaagaaattaaagcaaaacaacgtgctcgactttgacgacttgatcatgaaggcg
attcagttgttccaagaagcgccggacgtgctcgcgttttatcagaagaaattccaatac
atccacgtcgacgagtatcaagatacgaaccgggcccaatacacgctcgtcaagttgctc
gcgcaggcacatgagaacttgtgtgtcgtcggtgactcggatcagtcgatttatcgctgg
cgcggtgccgatatcgccaacatcttgacgttcgagaaggattacccgagcgcgcacgtc
atcttgctcgaacaaaactatcggtcgacgaagcggattttggaagcggcgaacggtgtc
attcaaaacaactcgggtcgaaaagacaagcagctttggaccgagaacgtcgaaggcgag
aaactcctcttgcatgtcgcctcggatgaccgggatgaagcgttcttcatcatcaatcag
atgaaggagctccgccaagaaggtatcgattacggcgagatggccgtcctgtaccggacg
aacgcccaatcgcgtggactcgaggaaatgctcctcaagtcgaacatcccgtataagatg
gtcggcgggacgaagttctatgaacgaaaagaaatcaaggatatcttggcgtatttgcgc
ttaatcgccaacccggacgaggacatctcattcgtccgtgtcgtcaacgaaccgaagcgc
ggcatcggcgccgcgacggtcgataagctcggcgacttcgccgggatgcaaggcgtgtcg
ctcatggaagcgattcgtgacatcgaactgtcgggcattgcgccgcgcacagcgacgaag
ctcgccgagttccgtcaattgatggtcgatttgcgtcaaatggccgactacttgtccatc
tcggaattgattgaagaagtgttgaagaagtcaggctacgaagagatgctcaaaatcgag
aagacgctcgaagccgagagccgccttgagaacttgcaagagttcctctcggtcgcccaa
aactttgagaaagagagtgacgagcagacactcgtcgcctttttgaccgatttgacgctc
gtctcggacctcgacacgctcgaagaagtcgacgagttacaccaagtcacactcatgacg
ctacactcggccaagggacttgagttcccggtcgtcttcttgattgggatggaagaaggg
ttgttcccgcacagccgtgccttgaacgacccggaagagatggaagaagaacgccgtctc
gcgtacgtcggcatcacgcgggccgagaagcgtctctatttgacacgggcccagtcccgc
atgttgtacgggcgtttccaaaacaacccggagtcgcgcttcttgcacgagttgccagag
acgctcttggagcgctcgggcaaagcgaagaagccgatgccatggaatccagtcgagtcg
ccggggaaacttcctgtgaacggcttcagctcgaaaccgaaaccaaaacttgcccagtcg
tccggcgccgaatcaatcggttggaacgttggggacaaggccaatcataagaaatgggga
caaggcacggtcgttcagacgcgtggcgaaggcgatcagctcgagctcgatatcgctttc
ccggcagtcggcatcaagcgcctgctcgccaagtttgccccaatcgaaaaagcgtga
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