Exiguobacterium mexicanum: ACNOIU_13035
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Entry
ACNOIU_13035 CDS
T11248
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
emex Exiguobacterium mexicanum
Pathway
emex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
emex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACNOIU_13035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emex03000
]
ACNOIU_13035
Transcription factors [BR:
emex03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACNOIU_13035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
HTH_3
TPR_8
HTH_31
Mad3_BUB1_I
TPR_MalT
RPN7
SNAP
Arc_C-lobe
OKR_DC_1_N
TPR_11
T6SS_VasJ
Motif
Other DBs
NCBI-ProteinID:
XPL66152
LinkDB
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Position
complement(2497944..2499224)
Genome browser
AA seq
426 aa
AA seq
DB search
MQNNYGNLIKVERLRRNMKQSVLARGICSVSYLSKIENNQTIPSEEVLDLLFRKLDLDIP
LYVTVTDNEIEKIKVEILRLIKEAVLSRNLNETAENLKKIERYKKDHRIYKHKPLYILML
LVLARFDFMPGGKQGYLTELEWLQDQFTSEDRIRFNILKALKSFSLNDKDTALDLMQQVR
EELDTTYLEEWEIADINYIIGGMYYKYTDYLQAIEHVNRALSYFKDNFYVERIIECHLII
GLAFKRRKRFNEALANYKKAIKAAGATDLKGYYGMLYNNTGEIYSLQGNRELALEYFLKG
LEYKVESKSKLLSILSLIEEYSIRGSSQEVLDWVEKGEEIIQEEDNDNLSEFIYHFGVFR
NKYTNGNSKELIESLKKAVQYFESSDDYHYTNKYALWLARELRENGKYKLSTEYYEKSIA
IMSRWD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattatgggaatttaattaaagtagagcgtctgcgtcgaaatatgaaacag
tctgttttagcccgtggaatatgctccgtctcatatttaagtaaaattgaaaataaccag
actatccctagtgaagaagtactagatcttctttttaggaaattagacttagatattcct
ctttacgtaacagtgactgataatgaaattgaaaaaattaaagtagagattttaagacta
ataaaagaagctgttttatcaaggaacttaaatgaaacagcagaaaatttgaaaaaaata
gaacgatataaaaaggaccataggatttataaacataaacctttatatatattgatgcta
ttagtgttagcaaggtttgatttcatgcctggtggaaaacaaggttacttaactgaatta
gaatggttacaagatcaatttacatcagaggatcgtataagattcaacattctcaaagct
ttaaaatctttttcattaaatgataaagatacagcattagatttaatgcaacaagtgagg
gaggagttagatacaacgtacttggaagaatgggaaatagccgacatcaattatattatt
ggtggtatgtattataaatatacggattatttacaagcgattgaacatgtgaatagagcg
ctatcgtattttaaagataatttttatgtagaacgaataatagaatgccatttaattatc
ggattagcttttaaacgaagaaaacgatttaacgaagcattagctaattacaaaaaggca
attaaagctgccggggcaacggacttaaaaggatattatggcatgctttacaacaacacg
ggtgaaatatattctctacaaggtaatagagagcttgcattagaatatttcttaaaaggg
ctagaatataaagttgaaagcaaaagtaaactactaagtattctttcattaattgaagaa
tattctattagaggaagttcccaagaagtattagactgggtagagaagggggaagaaatt
attcaagaagaggacaatgataacctatccgaatttatatatcattttggagtttttcga
aataagtatactaatgggaacagtaaagaattgattgagagcttaaaaaaggcagtgcag
tattttgaatcttccgatgactatcattacacaaacaaatatgccctttggttagcacgt
gagctacgagaaaatgggaagtacaaactatctactgaatactatgaaaaatccattgcg
attatgtctcgatgggattaa
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