Elizabethkingia meningoseptica: BBD33_02355
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Entry
BBD33_02355 CDS
T04744
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
emg
Elizabethkingia meningoseptica
Brite
KEGG Orthology (KO) [BR:
emg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emg03032
]
BBD33_02355
03400 DNA repair and recombination proteins [BR:
emg03400
]
BBD33_02355
Enzymes [BR:
emg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBD33_02355
DNA replication proteins [BR:
emg03032
]
Prokaryotic type
DNA Topoisomerases
BBD33_02355
DNA repair and recombination proteins [BR:
emg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBD33_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HTH_24
HTH_Crp_2
Toprim_4
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AQX04158
LinkDB
All DBs
Position
492813..495362
Genome browser
AA seq
849 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLETFTPDYEVSSDKK
KLVTELKALAKKADMVWLASDEDREGEAIAWHLAEELKLKGDKTKRIVFHEITKNAILKA
IENPRNIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IMNFSPQAAYKVEGTFLNGDKKEILAKLKKDFATEQEAEGFLTQCSTTDFKVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTTTMRVAQRLYEEGYITYMRTDSVNLSQEAINSAK
ATILKEYGEEYSAPRNYTTKNASAQEAHEAIRPTDFGVKSIGDVQLNKLYQLIHKRAIAS
QMANAKIEKTVIEIGHQKLAHHFEAAGEVIIFDGFLKVYGITKSEDDEDENDEKLLPKVS
IGEGLQYKKIIATEKFTKAPARYTEAALVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
ISAKEREIVQLTLTSSLKKETLVEKYGADKNKFLPTDIGIVVNDFLVNNFNEILDYGFTA
RVEEAFDIIAEGNRAWKDVMTEFYGKFHPRIADVEENADRATGDRILGTDPKTGKNIHAR
IGRFGAMIQIGETDDEEKPIFASLMPHQNISTITLEEALELFKIPFNLNDYEGKEVVVGV
GRFGPYIKWGEAYISLPKNVDPLSVDNDIALEIIEEKKKADAPIATYKGEPVTKGTGRFG
PFIKYKDIFVNVPKKYDFNNLSQSDINELIDAKLEKEANRYIQQWEDQKVSLENGRWGPF
IRFNKKMLKIPFKSKGEKYTAEELQNISFDEVKKWIIAQDETAFKEKAKKAPAKKTAAKK
PATKKTSKK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatctcgtgattgtggagtcccctgcgaaggctaagacgatccagaagtac
cttggtaatgattttgaagtaacttccagtatgggacatatccgtgaccttcccaaaaaa
ggcatgggaattaaccttgaaacatttactccggattatgaggtttcttcagataagaag
aaactggttaccgagcttaaagctcttgccaaaaaagcagacatggtgtggctggcttcc
gatgaagaccgtgaaggggaagctattgcatggcacctggcggaagaattaaaattaaag
ggcgataaaacaaaaagaattgtattccacgagattacaaagaatgctattcttaaagca
atagaaaatccaagaaatatagatcagaatcttgtcaatgcacaacaggcaagaagagtt
ctggacagaattgtaggttttgaaatgtctcctgttttatggaagaaggtaaaacccgga
ttatctgccggacgtgtacaatctgtagcggtacgtttggttgttgagcgggaaaaagaa
atcatgaatttctcccctcaggcggcttataaagtagaaggaactttcctgaacggagat
aaaaaagaaatcttagccaaactcaagaaagattttgctacggagcaggaagccgaaggt
ttccttactcagtgcagtacaaccgacttcaaagttttaaatgttgaaaagaagcctgga
cagcgctcagcatcagcaccgtttacaacatctactctgcagcaggaagcttccaacaga
ttaggttattctgttacaacaacaatgcgtgttgcccagcgtctttatgaagaaggttac
attacgtatatgagaacggatagtgtaaacctttcgcaggaagctattaattctgcaaaa
gcaactattttaaaagaatatggtgaagaatattctgcaccaagaaattataccaccaaa
aatgcatcggcacaggaagctcacgaagcgattcgtcctacagactttggtgtgaaatca
attggagatgtccagctgaataaactttatcagctgattcacaaaagagcgattgccagt
cagatggcaaatgctaaaattgaaaagacggtaatcgaaataggtcatcagaaattagca
catcatttcgaggcagccggagaagttatcatctttgatggtttcttaaaagtatacggc
atcacgaaaagtgaggatgatgaagatgaaaatgatgagaaattattgcctaaagtaagt
attggtgaaggtttgcaatacaaaaaaattattgcaactgaaaaattcacaaaagctccc
gccagatatactgaagcagctttggtaagaaaactggaagaactaggtattggtagacct
tctacttatgcgccaaccatccagacaattcagaaccgtgaatatgttgacaaaagagaa
atttctgcaaaagagcgggaaattgttcagcttactttaacttcttctttaaaaaaggag
actcttgtagagaaatacggtgctgataaaaataaattccttccgactgatattggtatt
gttgttaatgatttccttgttaataacttcaatgaaattcttgattacggatttacagcc
cgtgtagaggaagcatttgatattattgctgaaggtaacagagcctggaaagatgtaatg
actgaattctatggcaagttccatcccagaattgccgacgtagaagagaatgctgatcgt
gcaacgggtgaccgcatcctgggaacagatcctaaaaccggaaaaaatattcatgcacga
atcggaagatttggcgcaatgattcagatcggagaaactgatgatgaggaaaaaccaatt
tttgcttcattgatgccgcatcagaatatttctacgattacgttggaagaagctttagag
ttattcaaaattcctttcaatcttaacgattatgaaggtaaggaagttgtagttggcgtt
ggccgttttggcccttacattaagtggggtgaagcttatatcagccttcctaaaaatgta
gatcctttatctgtagataatgatattgctttagaaattatagaggaaaagaaaaaagcc
gacgctcctattgcaacatataaaggagaacctgtaacaaaaggaacaggaagattcgga
ccttttattaaatacaaagatatttttgtaaacgtaccaaagaaatacgatttcaataat
ctttctcagagtgacatcaatgaacttattgatgctaaacttgaaaaagaagccaataga
tatatccagcaatgggaagatcagaaggtttctcttgaaaacggaagatggggaccattc
attcgttttaataaaaaaatgctgaaaattccttttaaatcaaaaggagaaaaatatacc
gcagaagaacttcagaacatttcttttgatgaagtaaagaaatggattattgcccaggat
gaaacagcttttaaagaaaaagctaaaaaggctccggcaaaaaaaacagctgcaaagaaa
cctgcaacaaaaaaaacctctaaaaaatag
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