Elizabethkingia meningoseptica: BBD33_08640
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Entry
BBD33_08640 CDS
T04744
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
emg
Elizabethkingia meningoseptica
Brite
KEGG Orthology (KO) [BR:
emg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emg03400
]
BBD33_08640
Enzymes [BR:
emg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBD33_08640
DNA repair and recombination proteins [BR:
emg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBD33_08640
Prokaryotic type
BBD33_08640
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AQX05309
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All DBs
Position
1875766..1877061
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AA seq
431 aa
AA seq
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MKNKVSIFWFRRDLRLTDNTGLHHALGSEFPVLPIFIFDTDILDQLEDKKDRRVDYIHQA
LTAINSSLKKYGSKLRIYYGKPMETFRALSEEYDIEAVFCNRDYEPKAIERDKEIYYFFR
EKNIPFKAYKDQVIFDKDDILKKDGSPYTVYTPFAKKWRETLTPDHYKAKTLNLQNVFRQ
EYSDIVQLNTIGFEKTGIEFKDPVLDAKIIDEYHKYRDYPALQRTTQLGTALRFGTISIR
KCIAFALVHNQTWLSELIWREFFMQILYHFPQVVHQAFKKQYDNIQWRNDEKEFKCWCEG
KTGYPIVDAGMRQLNETGYMHNRVRMIVASFLCKHLLIDWRWGEAYFALKLDDYDLSANN
GNWQWAAGCGCDAAPYFRVFNPITQLEKFDKDLSYVKKWLPEYNTPAYPDPIVEHKYARD
RVLTEYARALR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaagtttccatattctggttccggagggatttacgattaacagacaatact
ggtttacatcatgccctgggatctgaatttccagtacttccaatttttatttttgatacg
gatattctggatcagctggaggataaaaaggaccgtagggtagactatattcatcaggct
ttaacggcaattaattcttcattaaaaaaatatggttcaaaactcaggatttactatggt
aaacccatggagactttcagagcactatcagaagaatatgatattgaagctgttttttgt
aaccgggattatgaaccgaaggcaattgaacgggataaagagatctattattttttccgg
gaaaaaaatatcccattcaaagcctataaagatcaggttatttttgataaagatgatatt
cttaaaaaagacggatctccttataccgtttacacaccgtttgccaaaaagtggagagaa
acactaacgccggatcattataaagcaaagacattaaatcttcagaacgtattccgacag
gaatattctgatattgtgcaactcaacacaattggctttgaaaaaacgggtattgaattt
aaagatccggtactggatgcaaagattattgatgaatatcataaatatcgcgattatccg
gctctgcagcgtaccacccagttgggaacagcattgcgtttcggaacgattagtatacgc
aaatgtattgcatttgcattggtgcataatcaaacatggctttcagaactgatctggcgg
gaattttttatgcagattctgtatcactttcctcaagtggtacatcaagcattcaaaaaa
caatatgataatatacaatggcgcaatgatgaaaaagaatttaagtgctggtgtgaagga
aaaaccggatacccgattgtagatgccggaatgcgtcagcttaatgagactggatatatg
cataatcgggtaaggatgattgtagcgagttttttatgtaagcatttattaatagactgg
cgatggggcgaagcttattttgcattaaaactggacgattatgatttgtctgccaacaat
ggaaactggcaatgggcagcgggttgcgggtgcgatgctgccccatatttcagggttttt
aatccgattacccagcttgaaaagtttgataaggatttatcgtatgtgaaaaaatggctg
cctgaatataatactcctgcttatcctgatccgatagtggaacataaatatgcaagagac
cgcgtattgacggagtatgcacgagcgctgaggtaa
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