Elizabethkingia meningoseptica: BBD33_09365
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Entry
BBD33_09365 CDS
T04744
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
emg
Elizabethkingia meningoseptica
Pathway
emg03030
DNA replication
emg03430
Mismatch repair
emg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBD33_09365
03430 Mismatch repair
BBD33_09365
03440 Homologous recombination
BBD33_09365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emg03032
]
BBD33_09365
03400 DNA repair and recombination proteins [BR:
emg03400
]
BBD33_09365
Enzymes [BR:
emg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBD33_09365
DNA replication proteins [BR:
emg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBD33_09365
DNA repair and recombination proteins [BR:
emg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBD33_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQX05440
LinkDB
All DBs
Position
2036399..2041060
Genome browser
AA seq
1553 aa
AA seq
DB search
MFLIFDTETTGLPRNFNAPLTDFDNWPRMVQIAWQLHDEQGNLIENQDYIIKPEGYDIPF
NAYRIHGISTDMAMREGRDLAEVLNEFNEVLKKAKVVAGHNVSFDYSIVGSEFLRKDIPD
TLKDLPIVDTMEFGTNVCQLPGGRGGRFKSPKLEELSEKLFGHKFDEAHNAAADVNATAQ
AFFEMMRLEVYPLDKIFFDDVMMKAFKDHNPTVFKPFDIVIRRQVADSKKRKKTVDFGDT
DDIDIGNFFHFYSHSIYSTLQSTSSLGDIVSIAEKNNFPAVGLVDLGNMMGAFKFIDEVE
KYNGGLKQKKQEAEEAEEKPANYDEINSAKFLTPILGLELYISERYQQRQFTKDDPDRRT
QVVLLAKNFEGYKNLAKLSSIGFKEGFYAGVPRISKALISQYKENLIALTGSLSCEIPST
ILELGEQRGEEVFQWWLNEFGEDFYVQIQNHQMDEEEYVNDILLKFADKHNVKILAQNET
YYTRKSDAKIQDIVSCIKDGEKLTTPVGKGFGKRKGLNSDQFYLKSGEEIKQAFQMYPDA
FIAYDEFLNKFESYKLKRDVLLPKFDIPEEFQDAEDLNDGGKRGEMNFLTHLTYEGARKK
YEEITDDIKERLDFELDIIAKTGYPGYFLIVQDFCNEAKNMGVSVGPGRGSAAGSAVAYC
IGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDRIIKWVIDKYGQNQVAQIITY
SVLGGKSAIKDAGRVLDVSIPETNNIAKLIPNTPGMNIAKVMKSDLKKFKPEDLPLVDEI
KGILNNPDDGRFNVLDSAYKMEGCIRNTGIHACGVIITPEDISNLVPVTIAAKDADILVS
QFDNSVAESAGLLKMDFLGLRTLTIIKDAVKLIKNRHGIEIIPDDIPLDDAKTYQLFKEG
RTIGIFQYESVGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGLEEIIYDL
PETEEYLQETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQKAVLDKMFPKFIEG
GKKNNLDEEKLHKIWKDWEAFAEYAFNKSHSTCYAYIAYHTAYLKANYPAEYMASVMSNN
INNTKQITLFMEDCQAMGVDVLGPSVNESEYEFAVNEKGQIRFGLGAIKGIGEGPSEAIC
KEREKGGRFADIYSFFERIPSSQLNKRVVESLVFAGAFDELDSYHRAQYFDVDTAGRTNI
ERLLRYSNSFQDSKNSVENSLFADFADEVQIERPKINPAPEWQNMHKLNREKEAIGFYLS
AHPLDEFYYQYKFIQGALSKKAVVNKKLDEDLEKTPETEKADEQDDKDEVSTDIDFPADM
LEVDGDEIIEEVVKKVDPRGKFNFLNLDEVDPYKDFILQRDFSNLTPAEISKLKEKKFRN
KGNDNSKEYMVSGLITEYVIRDGYESGTKIAFITLEDYTGSYSFRLNDKDYMRLREKLGE
HRFVIFKIKYAPSKDFDRLYVNVTEVIDLKEAFDRYANQLSLVVPFNEVDENDIEFFRRT
FAHNKGVHKLSFYLKDPVENHFVELNAMQTSVDISAETIKLLHEYKKYELFLN
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgatttttgatacggaaacaaccggtttaccccgaaatttcaatgctccttta
actgattttgataactggccacgtatggttcagattgcctggcagttgcatgatgagcaa
ggtaatcttatagaaaatcaggattacattatcaagcctgagggttatgatattccgttt
aacgcttatcgtattcacggaatttctaccgatatggcaatgcgtgaaggacgtgacctg
gcggaggtactgaatgaatttaatgaagtgctgaaaaaagcaaaggttgtagcgggtcac
aatgtaagcttcgattacagtatcgtaggatctgagtttttaagaaaagacattccggat
acgctgaaagacttaccgattgtagatacaatggaattcggtaccaatgtttgtcagctg
ccgggaggaagaggaggaagatttaaatctccgaaacttgaggaactatcagagaaactt
ttcgggcataaatttgatgaagcgcataatgctgctgccgacgttaatgctacagctcag
gcattctttgaaatgatgaggctggaggtttatccgctggataaaatcttctttgatgat
gtaatgatgaaggctttcaaggaccacaatcctacagttttcaaaccttttgatattgtc
atccgtcgtcaggttgctgactctaaaaaacgaaagaaaacggttgactttggagatacc
gacgatattgatatcggtaactttttccatttttacagccatagtatctattctacttta
cagtcaacatcaagccttggcgatattgtaagtattgccgaaaaaaataatttccctgca
gttggtctggttgatctgggaaacatgatgggtgctttcaaatttatagatgaggtagaa
aaatataatggtggactaaagcaaaagaaacaggaggctgaagaagccgaggaaaagcct
gccaattatgatgaaataaacagtgctaaattccttacaccaattctgggtctggaactt
tatatttctgaacgctaccagcaaagacaatttaccaaagatgacccggacagaagaact
caggtcgtattactggccaagaactttgaaggctataaaaatcttgcaaaactttcttcc
ataggttttaaagaaggattttatgccggcgttccaagaattagtaaagctttaatttcc
caatataaagagaacctgattgccctaacaggtagtttgtcctgtgaaataccatccaca
attcttgaacttggagagcagcgcggggaggaagtcttccagtggtggctgaatgagttt
ggagaagacttctatgtacagattcagaatcaccagatggatgaggaagaatatgtaaat
gatattttattaaaatttgcagacaagcataacgttaaaatactggcacagaatgaaacg
tattatacgcggaaatctgatgccaagattcaggatattgtgtcctgtattaaagatggt
gaaaaacttacaactcctgtaggaaaaggtttcggaaagagaaaagggcttaatagtgat
cagttctatctgaaaagtggtgaagagattaaacaggcttttcagatgtatccggatgca
ttcatcgcttatgatgaattcctgaacaagtttgaatcctataaactaaaaagagatgtt
ctccttcctaaatttgatattcctgaagagtttcaggatgccgaagatttaaatgacggg
ggaaaacgcggggagatgaattttcttacgcaccttacgtatgaaggtgcccgtaaaaaa
tatgaggaaattacagatgatataaaggaaagactggactttgaactggatattattgcc
aagacggggtatccgggttatttccttattgtacaggatttttgtaatgaggctaaaaat
atgggtgtttcggtaggaccgggacggggatcggcagcaggttctgcggttgcatactgt
atcggaattaccaatgttgaccccattaaatatgatctcctttttgagcgttttcttaac
ccggaaaggatttcgatgcccgatattgatattgactttgatgatgaaggccgtgaccgg
attattaaatgggtaattgataaatacggacaaaatcaggtggcacagattattacctac
tcggtactgggaggtaaatcggctattaaagatgcaggaagggtactggatgtatctatt
cctgaaaccaataatattgcgaaactaattccgaatactccggggatgaacattgccaag
gtaatgaaatccgacctgaagaaattcaagccggaagatcttccgttagtggatgagata
aagggaattctgaataacccggatgacggacgttttaatgtactggacagtgcctataaa
atggaaggctgtatccggaatacagggattcatgcctgtggcgtaattattacaccggaa
gatatcagtaatctggttccggtaactattgcagcaaaagatgccgacattttggtatcg
cagtttgataactcggtagcggagagtgcgggtcttctgaaaatggacttcctgggactt
agaacgcttacgattattaaggatgctgtaaaactgattaaaaacagacacggaatagaa
attattccggatgatattccactggatgatgctaagacctatcagctctttaaagaaggc
cgtacgattggtattttccagtatgaatctgtcggaatgcaaaagtacatgcgtgagctg
aaaccaaccgtatttgcggatcttatagccatgaatgcattgtaccgtccgggaccgatt
aaatatataccgaactttattaaccgtaagcacggtctggaagaaattatatatgactta
ccggaaaccgaagaatatcttcaggaaacttatggtattacggtatatcaggagcaggta
atgctgctttcccagaagctggcaaactttacaaaaggtgaggccgatacgctgagaaaa
gccatgggtaaaaagcagaaagcggtactggataagatgttccctaaatttattgaaggg
ggtaagaaaaacaacctggacgaagagaaacttcataaaatatggaaagactgggaggct
tttgcagaatacgcatttaacaaatcccactctacatgttatgcatatattgcttatcac
actgcttatctgaaggccaattatccggctgagtatatggcgagtgttatgagtaataac
attaacaacacgaagcagattaccttatttatggaagactgtcaggcaatgggcgttgac
gttctggggccgtcggtaaacgaatccgaatatgaatttgcggtaaacgaaaaaggacag
atccgttttggtttaggggcgataaaaggtatcggtgaaggcccgtctgaagcaatatgc
aaggaaagagagaaggggggaaggtttgctgatatttacagtttttttgaaagaattcca
tcttctcagttgaataaaagggtagtggaaagtttagtttttgccggtgcttttgatgaa
ctggattcttatcaccgtgcgcagtatttcgatgtggatactgccggaaggacaaatatt
gaacgattattaagatacagtaacagctttcaggatagtaaaaattccgtagagaattct
ttgtttgctgattttgcagatgaagtacagattgaaagacctaaaataaatccggctccg
gaatggcagaatatgcataagcttaaccgggagaaggaggctatcggtttctacctttca
gcacacccgctggatgaattctattatcagtacaagtttattcagggagccttaagtaaa
aaggcggtagtgaataaaaagcttgatgaagatttggaaaaaacacccgaaaccgaaaaa
gcagatgagcaggatgataaggatgaagtatctactgatattgatttccctgctgatatg
ctggaagtagatggtgatgagattatcgaagaggtggtaaaaaaagtagacccgagaggg
aagtttaacttcctgaatctggatgaggtggatccttataaggattttatacttcaacgt
gatttttcgaatcttacgccggctgaaatttcgaaactgaaggaaaagaaattccggaat
aaagggaatgataattccaaagaatatatggtttcggggttaattactgagtatgtaatc
cgtgatggttatgaaagcggaaccaagattgcttttattaccctggaagattatacaggt
tcttattctttcagactgaatgataaggattatatgcgtttgagggaaaagctaggagaa
caccgttttgtgatcttcaagattaaatatgcgccttctaaagacttcgatcgtttatat
gtaaatgttacggaggttatagacctgaaggaggcttttgaccgttatgccaaccagctt
tctctggtggtacctttcaatgaagtagatgagaacgatattgagtttttcagacgtact
tttgcacataataaaggggtacataagcttagtttttatctgaaagaccctgttgagaat
cattttgtggaacttaatgcgatgcagacttcagtagatatcagtgctgaaacaataaag
cttctgcatgagtataagaaatatgaattattcttaaactaa
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integrated database retrieval system
