KEGG   Elizabethkingia meningoseptica: BBD33_11605
Entry
BBD33_11605       CDS       T04744                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
emg  Elizabethkingia meningoseptica
Pathway
emg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:emg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBD33_11605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emg03400]
    BBD33_11605
DNA repair and recombination proteins [BR:emg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBD33_11605
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BBD33_11605
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind SMC_N nSTAND1 AAA_16 AAA_29 RsgA_GTPase DnaJ_CXXCXGXG nSTAND3 AAA_21 ATPase_2 AAA_25 AAA_15 BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: AQX05850
UniProt: A0A1V3U1G6
LinkDB
Position
complement(2540394..2543219)
AA seq 941 aa
MENTDFIEVYGAREHNLKDISVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETF
SAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTSKNPRSTVGTVTELYDFLRLLFARVSD
AYSADSGEKMIGYSEDQILESIRKNYSGQKVLLLAPVVRSRKGHYRELFAQYSKKGYIQA
RVDGELIDIEPDLKLDRYKTHDIEIVVDRLIMGEAASEARIQKSLSTALHLGEGIVMVQK
FGEDNFRYFSKNLMDAATGESIPLPEPNTFSFNSPKGSCPTCKGLGNIKKINTDFFVENP
KLSISQGALLPLEDIKNNKWLLAQIKSILDLYDLDLSTPFNKIHEEALNLIYNGCQQDIV
KDLKHAGISKKIKINFEGLVPFLEQVVEDKESYEATLVERHFTTDEVCPDCHGARLQPSS
LQFRIDGRNISEVSALSLSELQEWLEDVKDKFSEKNKIIAHEILKEIQSRLGFLLDVGLD
YLSLSRATRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLISSLKNLRD
IGNSVIVVEHDKDMILEADHVLDIGPKAGKFGGEILWQGKPDELIKADTITADYITGKRK
IEIPAERRKGNGKSIVLKGAKGNNLKNVNLEVPLGKLVVVTGISGSGKSSLINGTLYPIL
NRHFYRSVQEPLPYKSIEGIDNIDKIVDVDQSPIGRTPRSNPATYTGVFTDIRNLFAELP
EAKIRGYKPGRFSFNVKGGRCETCQGAGLKLIEMHFLPDVYVHCETCNGKRFNRETLEVR
YKGKSISDVLDMTINEAVEFFQPFPKIFAKVKTLQDVGLGYITLGQQSTTLSGGEAQRIK
LATELAKKQTGNTLYILDEPTTGLHFEDVKVLLNAIEQLVDMGNSFIIIEHNMDVIKMAD
YIIDIGPEGGKHGGKIVAEGTPEQIVKNKNSLTAKFLKKEL
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggaaaacacagatttcattgaggtttatggtgcccgcgaacataacctgaaagacatt
agcgtaaagatcccgcgcaatgaacttgttgtaattaccggactatccggaagcggaaaa
tcatcattagccttcgacactatatttgcagaaggacaaagacgatatatagaaacattt
tctgcctatgcacgtcagtttttaggtggcctggaaagacccgatgtcgataaaattgaa
ggactttctcccgttattgccatagaacagaaaacaacttccaaaaatccacgttcaacc
gtcggaacagttactgaactgtacgactttctgcgtcttctttttgccagagtatccgat
gcttattcggctgattccggtgaaaaaatgatcggctattcagaagatcagattttggaa
agtatccgtaaaaattacagcgggcaaaaagttcttttactggcacctgttgtaaggtcc
agaaaaggacattaccgtgaacttttcgcccagtattccaaaaaaggctatatacaggca
agagtagatggtgaacttattgatattgaaccagatttaaagcttgaccgttataaaacc
cacgatattgaaattgtagtagaccgtttgataatgggagaggccgcttctgaagccaga
attcagaaatctctttctacagcattacatttgggtgaaggaattgttatggtacagaaa
ttcggtgaagataacttcagatatttcagtaaaaatctgatggatgctgctaccggagaa
tcgattccgttgccggaacccaatactttctcatttaactctccgaaaggaagctgtcct
acgtgtaaaggacttggaaatataaaaaagattaatacagatttctttgtagaaaatcca
aaactttccatcagtcagggcgcattacttcccttggaagacattaaaaataataaatgg
ctgttggcacagatcaaatccattctggatttatatgatctggatttgtctacgcctttc
aataaaatccatgaagaagcgttaaaccttatttataatggttgtcagcaggatattgta
aaggatctgaaacatgcaggcatcagtaaaaaaataaaaatcaacttcgaagggcttgtt
cctttcctggagcaggtagtcgaagacaaggaaagctatgaagcaacccttgtagaaagg
cattttacgactgatgaagtttgtcccgattgtcatggtgccagattacagccttccagc
ctgcaattcagaattgatggcagaaatatttcagaagtcagcgcactttcactttcagaa
cttcaggaatggctggaggacgttaaagacaaattctcagagaaaaataaaattattgcg
cacgagattcttaaagaaatccaaagccgtttaggtttcctgctggatgtaggtttggat
taccttagtctcagccgtgcaacacgtacactatcgggtggagaatctcagcgtatccgt
cttgctactcagattggttctcagctggtaaacgtactttatatcctggatgagccttct
attggacttcaccagagagataatgaaagactgatcagctcgcttaaaaacctcagagat
attggcaactcggttattgttgtagaacacgataaagatatgattctggaagcagatcat
gtacttgacataggtcctaaagccggaaaattcggtggcgagattctttggcagggaaaa
ccggatgaacttataaaagctgatacaataacagctgattatatcaccggaaaacgtaaa
atagaaattcctgctgaaagaagaaaaggaaatggtaaatctattgttctgaaaggtgca
aaaggaaacaatctaaagaatgttaacctcgaagttccgttaggaaaactcgttgttgtt
accggaatttccggaagcggaaaatcttctctgatcaacggtactttatatcctatcctt
aaccgccatttctaccgaagtgtacaggaacctttaccttacaaaagtattgaaggtatt
gacaatattgataaaattgtagatgtggaccagtcgccaatcggcagaacaccacgttct
aacccggctacatatacaggtgtatttactgatatccggaatctgtttgcagaacttccg
gaagctaaaatccgaggttataaacccggaagattttcctttaatgtaaaaggcggaaga
tgcgagacctgtcagggtgccggattaaaattgattgaaatgcatttccttccggatgta
tacgtacattgtgagacatgtaacggaaaaagattcaacagagaaacgctggaagtgcgg
tacaaaggaaaatctatttccgatgtactggatatgactattaatgaagcggtagaattc
ttccagccattcccaaagatttttgcaaaggtaaaaaccctgcaagatgtaggtttaggt
tatatcacattagggcagcagtctaccacactttcaggtggggaagcccagcgtataaaa
ctggcaacagagctggcaaaaaaacaaaccggaaataccctttatattctggatgaaccg
acaacaggacttcattttgaggatgtgaaagtattactgaatgctattgagcaattggta
gatatggggaactcatttatcattatagagcataatatggatgtgattaaaatggcagac
tatattatcgatatcggtcctgaaggtggtaaacacggcggcaaaattgtagcagaagga
acacccgaacagatcgttaaaaacaaaaacagccttaccgctaaatttttgaaaaaagaa
ttgtaa

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